RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
SRRT-210ENST00000477529 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
SRRT-210ENST00000477529 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
SRRT-210ENST00000477529 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
SRRT-210ENST00000477529 ALPK3Q96L96 1907 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 USP17L10C9JJH3 530 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 AKR1B1P15121 316 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
SRRT-210ENST00000477529 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
SRRT-210ENST00000477529 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 ABHD8Q96I13 439 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 CABP5Q9NP86 173 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 CPA4Q9UI42 421 aa16.84■□□□□ 0.29
SRRT-210ENST00000477529 MKI67P46013 3256 aaKnown RBP16.83■□□□□ 0.29
SRRT-210ENST00000477529 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 C19orf81C9J6K1 198 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
SRRT-210ENST00000477529 APPP05067 770 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 BCRP11274 1271 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 LACTBP83111 547 aaPredicted RBP16.83■□□□□ 0.28
SRRT-210ENST00000477529 IFFO2Q5TF58 517 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 VPS53Q5VIR6 699 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 TMEM179Q6ZVK1 233 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 ACER1Q8TDN7 264 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 FEZ1Q99689 392 aa16.83■□□□□ 0.28
SRRT-210ENST00000477529 PLIN4Q96Q06 1357 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 CCDC171Q6TFL3 1326 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 SDSP20132 328 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 RASA1P20936 1047 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 C12orf42Q96LP6 360 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 NACAP1Q9BZK3 213 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 KIAA1683Q9H0B3 1180 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 NAPBQ9H115 298 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 EMILIN3Q9NT22 766 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 TMOD4Q9NZQ9 345 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 PNMA3Q9UL41 463 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
SRRT-210ENST00000477529 ZMYM6O95789 1325 aa16.81■□□□□ 0.28
SRRT-210ENST00000477529 CTGFP29279 349 aa16.81■□□□□ 0.28
SRRT-210ENST00000477529 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
SRRT-210ENST00000477529 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
SRRT-210ENST00000477529 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
SRRT-210ENST00000477529 SMCR8Q8TEV9 937 aaPredicted RBP16.81■□□□□ 0.28
SRRT-210ENST00000477529 CCDC17Q96LX7 622 aa16.81■□□□□ 0.28
SRRT-210ENST00000477529 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
SRRT-210ENST00000477529 ASCC2Q9H1I8 757 aaPredicted RBP16.81■□□□□ 0.28
SRRT-210ENST00000477529 A0A1W2PRG0 241 aa16.8■□□□□ 0.28
SRRT-210ENST00000477529 ICA1Q05084 483 aa16.8■□□□□ 0.28
SRRT-210ENST00000477529 PPARAQ07869 468 aa16.8■□□□□ 0.28
SRRT-210ENST00000477529 PABPC4Q13310 644 aaKnown RBP eCLIP16.8■□□□□ 0.284e-7■■□□□ 14.2
SRRT-210ENST00000477529 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
SRRT-210ENST00000477529 VCAM1P19320 739 aa16.79■□□□□ 0.28
SRRT-210ENST00000477529 HOXA7P31268 230 aaPredicted RBP16.79■□□□□ 0.28
SRRT-210ENST00000477529 USP14P54578 494 aa16.79■□□□□ 0.28
SRRT-210ENST00000477529 FBXO46Q6PJ61 603 aaPredicted RBP16.79■□□□□ 0.28
SRRT-210ENST00000477529 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
SRRT-210ENST00000477529 CENPQQ7L2Z9 268 aaPredicted RBP16.79■□□□□ 0.28
SRRT-210ENST00000477529 SIAH1Q8IUQ4 282 aa16.79■□□□□ 0.28
SRRT-210ENST00000477529 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.79■□□□□ 0.28
SRRT-210ENST00000477529 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
SRRT-210ENST00000477529 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
SRRT-210ENST00000477529 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
SRRT-210ENST00000477529 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
SRRT-210ENST00000477529 ALX1Q15699 326 aa16.78■□□□□ 0.28
SRRT-210ENST00000477529 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
SRRT-210ENST00000477529 ANKRD13CQ8N6S4 541 aa16.78■□□□□ 0.28
SRRT-210ENST00000477529 IL25Q9H293 177 aa16.78■□□□□ 0.28
SRRT-210ENST00000477529 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
SRRT-210ENST00000477529 CEP290O15078 2479 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 LRRC37A2A6NM11 1700 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 HIP1O00291 1037 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 PRDM1O75626 825 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 CAPN15O75808 1086 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
SRRT-210ENST00000477529 OSBPP22059 807 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 KIAA1755Q5JYT7 1200 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 TRIM47Q96LD4 638 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 MKNK2Q9HBH9 465 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 ANAPC4Q9UJX5 808 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.28
SRRT-210ENST00000477529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.77■□□□□ 0.28
SRRT-210ENST00000477529 FGAP02671 866 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
SRRT-210ENST00000477529 GCLCP48506 637 aaPredicted RBP16.76■□□□□ 0.27
SRRT-210ENST00000477529 MFAP1P55081 439 aaKnown RBP16.76■□□□□ 0.27
SRRT-210ENST00000477529 HERVK_113P62684 666 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 CTDSPL2Q05D32 466 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 KIF22Q14807 665 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 SKAP1Q86WV1 359 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 TMX2Q9Y320 296 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 TACC3Q9Y6A5 838 aa16.76■□□□□ 0.27
SRRT-210ENST00000477529 IGKV6D-41A0A0C4DH26 115 aa16.75■□□□□ 0.27
SRRT-210ENST00000477529 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms