RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.04■□□□□ -02e-12■■■■■ 99.6
SRRT-210ENST00000477529 RPS3P23396 243 aaKnown RBP eCLIP13.72□□□□□ -0.218e-10■■■■■ 65.9
SRRT-210ENST00000477529 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.372e-12■■■■■ 64.5
SRRT-210ENST00000477529 LARP4Q71RC2 724 aaKnown RBP eCLIP12.89□□□□□ -0.359e-14■■■■■ 49.8
SRRT-210ENST00000477529 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.569e-37■■■■■ 34.1
SRRT-210ENST00000477529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.347e-9■■■■□ 21.3
SRRT-210ENST00000477529 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.133e-6■■■□□ 19.1
SRRT-210ENST00000477529 EFTUD2Q15029 972 aaKnown RBP eCLIP13.52□□□□□ -0.258e-7■■■□□ 19.1
SRRT-210ENST00000477529 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.084e-8■■■□□ 15.8
SRRT-210ENST00000477529 ZC3H11AO75152 810 aaKnown RBP eCLIP15.5■□□□□ 0.073e-9■■■□□ 15.2
SRRT-210ENST00000477529 PABPC4Q13310 644 aaKnown RBP eCLIP16.8■□□□□ 0.284e-7■■□□□ 14.2
SRRT-210ENST00000477529 SF3A3Q12874 501 aaKnown RBP eCLIP12.64□□□□□ -0.393e-8■■□□□ 14.2
SRRT-210ENST00000477529 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.3■□□□□ 0.047e-8■■□□□ 12.9
SRRT-210ENST00000477529 CPSF6Q16630 551 aaKnown RBP eCLIP13.24□□□□□ -0.295e-6■■□□□ 12.7
SRRT-210ENST00000477529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.436e-6■□□□□ 11.3
SRRT-210ENST00000477529 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.042e-9■□□□□ 10.5
SRRT-210ENST00000477529 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.156e-11■□□□□ 9.1
SRRT-210ENST00000477529 RBM15Q96T37 977 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■□□□□ 9.1
SRRT-210ENST00000477529 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.323e-6■□□□□ 9
SRRT-210ENST00000477529 ZNF622Q969S3 477 aaKnown RBP eCLIP18.12■□□□□ 0.496e-9■□□□□ 8.8
SRRT-210ENST00000477529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.035e-6■□□□□ 8.1
Retrieved 21 of 21 RNA–protein pairs in 6.6 ms