RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.19□□□□□ -1.58
CCNL1-215ENST00000474539 PCDHB13Q9Y5F0 798 aa5.19□□□□□ -1.58
CCNL1-215ENST00000474539 KIF1AQ12756 1690 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 KDM6AO15550 1401 aaPredicted RBP5.18□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L5A8MUK1 530 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 TTLL1O95922 423 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 CETPP11597 493 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 SLC15A2Q16348 729 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 NSMFQ6X4W1 530 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 SYNE4Q8N205 404 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 BBS5Q8N3I7 341 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 C8orf58Q8NAV2 365 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 SELENOOQ9BVL4 669 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 ATF5Q9Y2D1 282 aaPredicted RBP5.18□□□□□ -1.58
CCNL1-215ENST00000474539 COMMD10Q9Y6G5 202 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 ERCC6L2Q5T890 1561 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 DEPDC5O75140 1603 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 USP32Q8NFA0 1604 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 A0A1B0GVL5 298 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 SLC25A27O95847 323 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 ATP2A2P16615 1042 aaKnown RBP5.18□□□□□ -1.58
CCNL1-215ENST00000474539 TRAPPC10P48553 1259 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 BIRC2Q13490 618 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 UVSSAQ2YD98 709 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 AKNAD1Q5T1N1 836 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 NCAPG2Q86XI2 1143 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 ELMOD1Q8N336 334 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 KCTD17Q8N5Z5 321 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 DEPTORQ8TB45 409 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 CACTINQ8WUQ7 758 aaKnown RBP5.18□□□□□ -1.58
CCNL1-215ENST00000474539 GLG1Q92896 1179 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 TRIM62Q9BVG3 475 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 TM6SF1Q9BZW5 370 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 TRPC6Q9Y210 931 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 KBTBD13C9JR72 458 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 KCNQ2O43526 872 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 KPNA6O60684 536 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 SNAPC2Q13487 334 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 MSL1Q68DK7 614 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 FCHSD1Q86WN1 690 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 TRIM47Q96LD4 638 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 NAP1L3Q99457 506 aaPredicted RBP5.18□□□□□ -1.58
CCNL1-215ENST00000474539 STIM2Q9P246 746 aa5.18□□□□□ -1.58
CCNL1-215ENST00000474539 IQSEC3Q9UPP2 1182 aaPredicted RBP5.18□□□□□ -1.58
CCNL1-215ENST00000474539 DCDC2CA8MYV0 355 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 KIF5CO60282 957 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 ENTPD3O75355 529 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 FLOT1O75955 427 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 ABCB11O95342 1321 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 TNNC2P02585 160 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SLFN13Q68D06 897 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 FAM43BQ6ZT52 329 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 MIER3Q7Z3K6 550 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 REXO1Q8N1G1 1221 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 UBE2Q2Q8WVN8 375 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CSRNP1Q96S65 589 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 MEIS3Q99687 375 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CCDC77Q9BR77 488 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 PLCD4Q9BRC7 762 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 STMN4Q9H169 189 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 TUBBP07437 444 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 ASIC1P78348 528 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 FAM47CQ5HY64 1035 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SND1Q7KZF4 910 aaKnown RBP eCLIP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 RIOK1Q9BRS2 568 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 NACA2Q9H009 215 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SERPINB13Q9UIV8 391 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SLIT1O75093 1534 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 NEXMIFQ5QGS0 1516 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 GPAA1O43292 621 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 GAP43P17677 238 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 IBSPP21815 317 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SYKP43405 635 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 LMAN1P49257 510 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 TNFAIP2Q03169 654 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CKAP4Q07065 602 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SEMA3FQ13275 785 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 AP3B2Q13367 1082 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SEPT2Q15019 361 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 CDC37Q16543 378 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SLC4A8Q2Y0W8 1093 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 STRIP1Q5VSL9 837 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 NLRP10Q86W26 655 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 RGS22Q8NE09 1264 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 IPO4Q8TEX9 1081 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 MRPS27Q92552 414 aaKnown RBP5.17□□□□□ -1.58
CCNL1-215ENST00000474539 LPAR1Q92633 364 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 PAGR1Q9BTK6 254 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 SEZ6LQ9BYH1 1024 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 NWD1Q149M9 1564 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L15C9J2P7 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L13C9JLJ4 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L11C9JVI0 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L18D6R9N7 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L22D6RA61 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L17D6RBQ6 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L19D6RCP7 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L20D6RJB6 530 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 GAS7O60861 476 aa5.17□□□□□ -1.58
CCNL1-215ENST00000474539 LIG1P18858 919 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms