RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 GPBAR1Q8TDU6 330 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 GAL3ST3Q96A11 431 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 FERD3LQ96RJ6 166 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 ATXN3LQ9H3M9 355 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 BRMS1Q9HCU9 246 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 PRKAG3Q9UGI9 489 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 R3HCC1Q9Y3T6 440 aaKnown RBP6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 SOGA1O94964 1423 aa6.05□□□□□ -1.44
SDCBPP2-201ENST00000424643 RUSC2Q8N2Y8 1516 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 TOPBP1Q92547 1522 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 CEP164Q9UPV0 1460 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 U2SURPO15042 1029 aaKnown RBP6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 KLF4O43474 513 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 CILPO75339 1184 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 HMGB1P09429 215 aaKnown RBP6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 HSP90B1P14625 803 aaKnown RBP6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 ZNF165P49910 485 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 ZNF252P-AS1Q0IIN9 211 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 CPSF6Q16630 551 aaKnown RBP eCLIP6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 ZC3H12AQ5D1E8 599 aaKnown RBP6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 ACSBG1Q96GR2 724 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 MRFAP1L1Q96HT8 127 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 SHDQ96IW2 340 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 FMNL2Q96PY5 1086 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 TBX22Q9Y458 520 aa6.04□□□□□ -1.44
SDCBPP2-201ENST00000424643 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 NEFMP07197 916 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 YBX3P16989 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 EIF6P56537 245 aaKnown RBP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 CYP27A1Q02318 531 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 PTPN11Q06124 597 aaPredicted RBP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 RAB33AQ14088 237 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 ZNF746Q6NUN9 644 aaPredicted RBP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 OGFOD3Q6PK18 319 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 SRPK1Q96SB4 655 aaKnown RBP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 CRBNQ96SW2 442 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 SIRPGQ9P1W8 387 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 CCDC39Q9UFE4 941 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 ZC3H7BQ9UGR2 993 aaKnown RBP6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 CSADQ9Y600 493 aa6.03□□□□□ -1.44
SDCBPP2-201ENST00000424643 EEA1Q15075 1411 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 TRIM37O94972 964 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 FAM87AP0C7U9 286 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 IRAK1P51617 712 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 HNRNPUQ00839 825 aaKnown RBP eCLIP6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 RPL6Q02878 288 aaKnown RBP6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 CLCQ05315 142 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 TNNI3KQ59H18 835 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 SDE2Q6IQ49 451 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 JAZF1Q86VZ6 243 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 FAM169BQ8N8A8 192 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 MKL1Q969V6 931 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 SSU72Q9NP77 194 aaKnown RBP6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 ANGEL1Q9UNK9 670 aaKnown RBP6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 POLA1P09884 1462 aaPredicted RBP6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 FGD5Q6ZNL6 1462 aa6.02□□□□□ -1.45
SDCBPP2-201ENST00000424643 WDR62O43379 1518 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 CCDC85CA6NKD9 419 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 DCDC2CA8MYV0 355 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 GRIN3BO60391 1043 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 LEFTY1O75610 366 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 GIPRP48546 466 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 PPM1JQ5JR12 505 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 NFXL1Q6ZNB6 911 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 C12orf40Q86WS4 652 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 REXO1Q8N1G1 1221 aaKnown RBP6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 NLGN1Q8N2Q7 840 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 ISL2Q96A47 359 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 PCOLCE2Q9UKZ9 415 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 ZNRF3Q9ULT6 936 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 PCDHA4Q9UN74 947 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 POLR3KQ9Y2Y1 108 aaPredicted RBP6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 PCDHB14Q9Y5E9 798 aa6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 THOC2Q8NI27 1593 aaKnown RBP6.01□□□□□ -1.45
SDCBPP2-201ENST00000424643 ABCA10Q8WWZ4 1543 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 WDR97A6NE52 1622 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 TARBP1Q13395 1621 aaKnown RBP6□□□□□ -1.45
SDCBPP2-201ENST00000424643 ANKRD62A6NC57 917 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 CDK8P49336 464 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 CYP27C1Q4G0S4 372 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 SCARA3Q6AZY7 606 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 ZNF662Q6ZS27 426 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 LSRQ86X29 649 aaPredicted RBP6□□□□□ -1.45
SDCBPP2-201ENST00000424643 PHF6Q8IWS0 365 aaKnown RBP eCLIP6□□□□□ -1.45
SDCBPP2-201ENST00000424643 ABI1Q8IZP0 508 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 RNF214Q8ND24 703 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 OR6P1Q8NGX9 317 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 CACNA2D2Q9NY47 1150 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 SNTG2Q9NY99 539 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 ACTR10Q9NZ32 417 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 MRPL42Q9Y6G3 142 aaKnown RBP6□□□□□ -1.45
SDCBPP2-201ENST00000424643 CUX2O14529 1486 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 MRC2Q9UBG0 1479 aa6□□□□□ -1.45
SDCBPP2-201ENST00000424643 PRNPP04156 253 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms