RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
CCDC57-205ENST00000392346 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 PPP2R2CQ9Y2T4 447 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 CDC25AP30304 524 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 SYCP1Q15431 976 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 VSTM4Q8IW00 320 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 UBXN4Q92575 508 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 GPR108Q9NPR9 543 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 ECM29Q5VYK3 1845 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 LCORLQ8N3X6 602 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 DHX58Q96C10 678 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
CCDC57-205ENST00000392346 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
CCDC57-205ENST00000392346 TRMT112Q9UI30 125 aaKnown RBP13.17□□□□□ -0.3
CCDC57-205ENST00000392346 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
CCDC57-205ENST00000392346 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 TPM4P67936 248 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 VPS54Q9P1Q0 977 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 IMPACTQ9P2X3 320 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-205ENST00000392346 CIAO1O76071 339 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 NAPBQ9H115 298 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-205ENST00000392346 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 JAG2Q9Y219 1238 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
CCDC57-205ENST00000392346 BCAMP50895 628 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 TRIM29Q14134 588 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 ATL3Q6DD88 541 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 OLFM4Q6UX06 510 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 PIGBQ92521 554 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 ZNF280DQ6N043 979 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC57-205ENST00000392346 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 RREB1Q92766 1687 aa13.15□□□□□ -0.3
CCDC57-205ENST00000392346 TADA3O75528 432 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 KIF6Q6ZMV9 814 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 STRBPQ96SI9 672 aaKnown RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 BLZF1Q9H2G9 400 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 KLHL42Q9P2K6 505 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 VEGFAP15692 232 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 TDO2P48775 406 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 POSTNQ15063 836 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 PROM2Q8N271 834 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 MYH7P12883 1935 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 DPYDQ12882 1025 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 NOSTRINQ8IVI9 506 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
CCDC57-205ENST00000392346 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC57-205ENST00000392346 CTSWP56202 376 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 SLC51AQ86UW1 340 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 ZBTB38Q8NAP3 1195 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 ABCF2Q9UG63 623 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 SLC15A2Q16348 729 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 RGPD3A6NKT7 1758 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-205ENST00000392346 RGPD4Q7Z3J3 1758 aa13.13□□□□□ -0.31
CCDC57-205ENST00000392346 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 IKBKBO14920 756 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 RAD9BQ6WBX8 426 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms