RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SRSF3P84103 164 aaKnown RBP-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PLCB3Q01970 1234 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 NHLH1Q02575 133 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CFHR1Q03591 330 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 DLX2Q07687 328 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 IKZF1Q13422 519 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SLC27A3Q5K4L6 730 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FAM214BQ7L5A3 538 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CTU1Q7Z7A3 348 aaKnown RBP-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ARHGEF25Q86VW2 580 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PROCA1Q8NCQ7 364 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 GALNT11Q8NCW6 608 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 IL17DQ8TAD2 202 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ASAP3Q8TDY4 903 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 IGDCC4Q8TDY8 1250 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MYLIPQ8WY64 445 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PYGO2Q9BRQ0 406 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ANKFY1Q9P2R3 1169 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CEP131Q9UPN4 1083 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SNX11Q9Y5W9 270 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 COL5A1P20908 1838 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 A0A1B0GU03 582 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HPXP02790 462 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CCNYL3P0C7X3 344 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 NR4A2P43354 598 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LGALS4P56470 323 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LINC00205P59089 165 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ADCY1Q08828 1119 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KCNH2Q12809 1159 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TCEA2Q15560 299 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KRTAP19-7Q3SYF9 63 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 COL13A1Q5TAT6 717 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CDPF1Q6NVV7 123 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KLHDC10Q6PID8 442 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 NHLRC1Q6VVB1 395 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SAPCD2Q86UD0 394 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CIR1Q86X95 450 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF761Q86XN6 746 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 BCL6BQ8N143 479 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LYG1Q8N1E2 194 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SH2D3CQ8N5H7 860 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF784Q8NCA9 323 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CTCFLQ8NI51 663 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF526Q8TF50 670 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ASB11Q8WXH4 323 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 INTS4Q96HW7 963 aaKnown RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RADILQ96JH8 1075 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PLEKHG4BQ96PX9 1271 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LPIN3Q9BQK8 851 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LRFN3Q9BTN0 628 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MKRN2Q9H000 416 aaKnown RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CHRDQ9H2X0 955 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 C11orf16Q9NQ32 467 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FRRS1LQ9P0K9 344 aa-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF282Q9UDV7 671 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CHTOPQ9Y3Y2 248 aaKnown RBP-1.12□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PRR36Q9H6K5 1346 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LRP1Q07954 4544 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FAM155AB1AL88 458 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SYT5O00445 386 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 P0C879 139 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RAC2P15153 192 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HOXA1P49639 335 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 OXCT1P55809 520 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KRTAP20-2Q3LI61 65 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SPINK14Q6IE38 97 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SEZ6L2Q6UXD5 910 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RNF111Q6ZNA4 994 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 Q6ZS52 159 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ERICH6Q7L0X2 663 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HDXQ7Z353 690 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CXorf67Q86X51 503 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LGI4Q8N135 537 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CARFQ8N187 725 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PROM2Q8N271 834 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF485Q8NCK3 441 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FBLIM1Q8WUP2 373 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 DDX11Q96FC9 970 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FHDC1Q9C0D6 1143 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SUSD2Q9UGT4 822 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 YBX2Q9Y2T7 364 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TACC3Q9Y6A5 838 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KIAA1109Q2LD37 5005 aa-1.13□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF521Q96K83 1311 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 A0A1W2PRU2 124 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MEN1O00255 615 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CEACAM5P06731 702 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 UMODP07911 640 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KRTAP2-3P0C7H8 128 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RHCEP18577 417 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF10P21506 573 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HNRNPA2B1P22626 353 aaKnown RBP-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PHKA2P46019 1235 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 NANOS2P60321 138 aaKnown RBP-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LMO4P61968 165 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CAPRIN1Q14444 709 aaKnown RBP-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SAMD5Q5TGI4 173 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ABLIM2Q6H8Q1 611 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PADI6Q6TGC4 694 aa-1.14□□□□□ -2.59
RNU6-1340P-201ENST00000384438 BMP8AQ7Z5Y6 402 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms