RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 SLC8A3P57103 927 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 MUM1L1Q5H9M0 696 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 CBX8Q9HC52 389 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 TRIML2Q8N7C3 387 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 SLF1Q9BQI6 1058 aa16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 DDX28Q9NUL7 540 aaKnown RBP16.85■□□□□ 0.29
GTF3C4-201ENST00000372146 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 CAPN12Q6ZSI9 719 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 HAUS2Q9NVX0 235 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 HLA-DOAP06340 250 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 NBPF20Q3BBV1 942 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 MRPL28Q13084 256 aaKnown RBP16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 GNPTABQ3T906 1256 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 EFHD1Q9BUP0 239 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 STRIP2Q9ULQ0 834 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 EEF1GP26641 437 aaKnown RBP16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 DNAJC6O75061 913 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 POLR2DO15514 142 aaKnown RBP16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 DCUN1D2Q6PH85 259 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 RBM8AQ9Y5S9 174 aaKnown RBP16.84■□□□□ 0.29
GTF3C4-201ENST00000372146 CALML3P27482 149 aa16.83■□□□□ 0.29
GTF3C4-201ENST00000372146 ADCY8P40145 1251 aa16.83■□□□□ 0.29
GTF3C4-201ENST00000372146 GPIHBP1Q8IV16 184 aa16.83■□□□□ 0.29
GTF3C4-201ENST00000372146 SH2D4AQ9H788 454 aa16.83■□□□□ 0.29
GTF3C4-201ENST00000372146 PDE6BP35913 854 aa16.83■□□□□ 0.29
GTF3C4-201ENST00000372146 IL9RQ01113 521 aa16.83■□□□□ 0.29
GTF3C4-201ENST00000372146 FAM170AA1A519 330 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 SAT1P21673 171 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 SV2BQ7L1I2 683 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 SYCE1LA8MT33 242 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 ESR2Q92731 530 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 HECW1Q76N89 1606 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 NBNO60934 754 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 IFNAR2P48551 515 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 RWDD2BP57060 319 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 HDAC11Q96DB2 347 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 FNBP1Q96RU3 617 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 A0A087WUV0 522 aaPredicted RBP16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 CCDC85BQ15834 202 aaPredicted RBP16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
GTF3C4-201ENST00000372146 H3BRJ5 948 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 PAK1Q13153 545 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 TRIM59Q8IWR1 403 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 CYTH2Q99418 400 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 AK2P54819 239 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 ZNF229Q9UJW7 825 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 LZTS1Q9Y250 596 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 GSTA4O15217 222 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 ZPR1O75312 459 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 INTS9Q9NV88 658 aaKnown RBP16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 ADKP55263 362 aaKnown RBP16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 POTEB3A0JP26 581 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 KCNK3O14649 394 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 DKC1O60832 514 aaKnown RBP eCLIP16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 POTEBQ6S5H4 581 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 ARMC2Q8NEN0 867 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 TRIM58Q8NG06 486 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 TYW1Q9NV66 732 aaKnown RBP16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 FGD4Q96M96 766 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 SMYD2Q9NRG4 433 aa16.82■□□□□ 0.28
GTF3C4-201ENST00000372146 COPG1Q9Y678 874 aaKnown RBP16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 SEPT2Q15019 361 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 CSGALNACT2Q8N6G5 542 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 AMFRQ9UKV5 643 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 C6orf118Q5T5N4 469 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 GRAMD1BQ3KR37 738 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 DDX42Q86XP3 938 aaKnown RBP eCLIP16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 RRP36Q96EU6 259 aaKnown RBP16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 MYO1AQ9UBC5 1043 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 GRK7Q8WTQ7 553 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 SFMBT1Q9UHJ3 866 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
GTF3C4-201ENST00000372146 TMEM232C9JQI7 657 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 NAP1L4Q99733 375 aaKnown RBP16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 KIFC3Q9BVG8 833 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 ASPHQ12797 758 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 TRIM8Q9BZR9 551 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 NOP53Q9NZM5 478 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms