RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 N4BP1O75113 896 aaKnown RBP26.81■■□□□ 1.88
TSKU-201ENST00000333090 IL2RBP14784 551 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 ALX1Q15699 326 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 CRACR2BQ8N4Y2 399 aaPredicted RBP26.81■■□□□ 1.88
TSKU-201ENST00000333090 MAGEB6Q8N7X4 407 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 MSANTD4Q8NCY6 345 aa26.81■■□□□ 1.88
TSKU-201ENST00000333090 KCPQ6ZWJ8 1503 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 USP5P45974 858 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 FXR1P51114 621 aaKnown RBP eCLIP26.8■■□□□ 1.88
TSKU-201ENST00000333090 CUL4BQ13620 913 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 SART3Q15020 963 aaKnown RBP26.8■■□□□ 1.88
TSKU-201ENST00000333090 KRT23Q9C075 422 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 LCMT1Q9UIC8 334 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 PLEKHG2Q9H7P9 1386 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 ANKRD18BA2A2Z9 1011 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 FAM205CA6NFA0 338 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 ABL1P00519 1130 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 GYPCP04921 128 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 CTAGE1Q96RT6 745 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 L1RE1Q9UN81 338 aa26.8■■□□□ 1.88
TSKU-201ENST00000333090 COBLO75128 1261 aa26.79■■□□□ 1.88
TSKU-201ENST00000333090 ACTN2P35609 894 aa26.79■■□□□ 1.88
TSKU-201ENST00000333090 CCT6AP40227 531 aaKnown RBP26.79■■□□□ 1.88
TSKU-201ENST00000333090 CNGA4Q8IV77 575 aa26.79■■□□□ 1.88
TSKU-201ENST00000333090 VGLL2Q8N8G2 317 aa26.79■■□□□ 1.88
TSKU-201ENST00000333090 EIF3JO75822 258 aaKnown RBP26.79■■□□□ 1.88
TSKU-201ENST00000333090 PDE8BO95263 885 aa26.79■■□□□ 1.88
TSKU-201ENST00000333090 CDKAL1Q5VV42 579 aa26.79■■□□□ 1.88
TSKU-201ENST00000333090 ERICH2A1L162 156 aa26.78■■□□□ 1.88
TSKU-201ENST00000333090 PAGE5Q96GU1 130 aa26.78■■□□□ 1.88
TSKU-201ENST00000333090 ZNF335Q9H4Z2 1342 aaPredicted RBP26.78■■□□□ 1.88
TSKU-201ENST00000333090 PRKAB2O43741 272 aa26.78■■□□□ 1.88
TSKU-201ENST00000333090 VSNL1P62760 191 aa26.78■■□□□ 1.88
TSKU-201ENST00000333090 DNAJC10Q8IXB1 793 aa26.78■■□□□ 1.88
TSKU-201ENST00000333090 HELBQ8NG08 1087 aaPredicted RBP26.78■■□□□ 1.88
TSKU-201ENST00000333090 ZFP91Q96JP5 570 aaPredicted RBP26.78■■□□□ 1.88
TSKU-201ENST00000333090 SLAIN2Q9P270 581 aa26.78■■□□□ 1.88
TSKU-201ENST00000333090 TTF2Q9UNY4 1162 aaKnown RBP26.78■■□□□ 1.88
TSKU-201ENST00000333090 TRIM75PA6NK02 468 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 MYO1CO00159 1063 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 TDO2P48775 406 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 LEKR1Q6ZMV7 388 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 C10orf67Q8IYJ2 551 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 CTAGE15A4D2H0 777 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 TRIM66O15016 1216 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 CTAGE8P0CG41 777 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 CTAGE6Q86UF2 777 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 CTAGE4Q8IX94 777 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 SYMPKQ92797 1274 aaKnown RBP26.77■■□□□ 1.88
TSKU-201ENST00000333090 NAPGQ99747 312 aaPredicted RBP26.77■■□□□ 1.88
TSKU-201ENST00000333090 AATFQ9NY61 560 aaKnown RBP eCLIP26.77■■□□□ 1.88
TSKU-201ENST00000333090 FAN1Q9Y2M0 1017 aa26.77■■□□□ 1.88
TSKU-201ENST00000333090 CCDC196A0A1B0GTZ2 297 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 ARID4AP29374 1257 aaPredicted RBP26.76■■□□□ 1.87
TSKU-201ENST00000333090 TUBB2AQ13885 445 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 STAMQ92783 540 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 TUBB2BQ9BVA1 445 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 GSG1L2A8MUP6 293 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 CTSWP56202 376 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 FANCBQ8NB91 859 aa26.76■■□□□ 1.87
TSKU-201ENST00000333090 UQCRFS1P1P0C7P4 283 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 CT47A1Q5JQC4 288 aaPredicted RBP26.75■■□□□ 1.87
TSKU-201ENST00000333090 RASSF4Q9H2L5 321 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 KAT6BQ8WYB5 2073 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 CDC25AP30304 524 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 CCDC102AQ96A19 550 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 VPS54Q9P1Q0 977 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 CTNND2Q9UQB3 1225 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 DCCP43146 1447 aa26.75■■□□□ 1.87
TSKU-201ENST00000333090 COL5A2P05997 1499 aaPredicted RBP26.75■■□□□ 1.87
TSKU-201ENST00000333090 PPP1R3GB7ZBB8 358 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 PHACTR2O75167 634 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 ERVK-24P63145 666 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 MAP3K12Q12852 859 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 ZNF654Q8IZM8 581 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 NID2Q14112 1375 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 PARP4Q9UKK3 1724 aaKnown RBP26.74■■□□□ 1.87
TSKU-201ENST00000333090 CASP8Q14790 479 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 SPATA5Q8NB90 893 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 CCDC51Q96ER9 411 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 GSDMAQ96QA5 445 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 UBR2Q8IWV8 1755 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 LRP6O75581 1613 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 N4BP3O15049 544 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 DPYDQ12882 1025 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 HLFQ16534 295 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 EARS2Q5JPH6 523 aaKnown RBP26.74■■□□□ 1.87
TSKU-201ENST00000333090 SH3RF1Q7Z6J0 888 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 TMTC1Q8IUR5 882 aa26.74■■□□□ 1.87
TSKU-201ENST00000333090 TUBB4BP68371 445 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 NOA1Q8NC60 698 aaKnown RBP26.73■■□□□ 1.87
TSKU-201ENST00000333090 NUP88Q99567 741 aaPredicted RBP26.73■■□□□ 1.87
TSKU-201ENST00000333090 TMOD3Q9NYL9 352 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 hCG_1642624A0A1W2PR95 340 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 PIP4K2BP78356 416 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 AKAP17AQ02040 695 aaKnown RBP26.73■■□□□ 1.87
TSKU-201ENST00000333090 WHAMMP3Q1A5X7 153 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 HSP90B2PQ58FF3 399 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 STAG1Q8WVM7 1258 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 PIGBQ92521 554 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms