RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 HDAC6Q9UBN7 1215 aa17.58■□□□□ 0.41
USP43-201ENST00000285199 PRKAB2O43741 272 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 RASGRP4Q8TDF6 673 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 EXOC4Q96A65 974 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 CABS1Q96KC9 395 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 CAPS2Q9BXY5 557 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.58■□□□□ 0.4
USP43-201ENST00000285199 ABCA8O94911 1581 aa17.58■□□□□ 0.4
USP43-201ENST00000285199 EZRP15311 586 aaKnown RBP17.58■□□□□ 0.4
USP43-201ENST00000285199 ADAT2Q7Z6V5 191 aaKnown RBP17.58■□□□□ 0.4
USP43-201ENST00000285199 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.58■□□□□ 0.4
USP43-201ENST00000285199 TADA3O75528 432 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 PHKA1P46020 1223 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 PLCD1P51178 756 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 C2orf54Q08AI8 447 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 CEP104O60308 925 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 VIMP08670 466 aaKnown RBP17.57■□□□□ 0.4
USP43-201ENST00000285199 PDE6AP16499 860 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 ZNF526Q8TF50 670 aaPredicted RBP17.57■□□□□ 0.4
USP43-201ENST00000285199 BAIAP2L1Q9UHR4 511 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 PRR29P0C7W0 189 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 WHAMMP3Q1A5X7 153 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 NELFCDQ8IXH7 590 aa17.57■□□□□ 0.4
USP43-201ENST00000285199 CYP2C19P33261 490 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 IFNL3Q8IZI9 196 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 N4BP1O75113 896 aaKnown RBP17.56■□□□□ 0.4
USP43-201ENST00000285199 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
USP43-201ENST00000285199 DCAF17Q5H9S7 520 aaPredicted RBP17.56■□□□□ 0.4
USP43-201ENST00000285199 CEP85LQ5SZL2 805 aa17.56■□□□□ 0.4
USP43-201ENST00000285199 CTDP1Q9Y5B0 961 aaPredicted RBP17.56■□□□□ 0.4
USP43-201ENST00000285199 B4DLN1 442 aa17.55■□□□□ 0.4
USP43-201ENST00000285199 F8W031 263 aaPredicted RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 MEX3CQ5U5Q3 659 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 ZMYM6O95789 1325 aa17.55■□□□□ 0.4
USP43-201ENST00000285199 IQSEC2Q5JU85 1478 aa17.55■□□□□ 0.4
USP43-201ENST00000285199 CALRP27797 417 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 TUBB4BP68371 445 aa17.55■□□□□ 0.4
USP43-201ENST00000285199 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
USP43-201ENST00000285199 TACO1Q9BSH4 297 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP43-201ENST00000285199 NIP7Q9Y221 180 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP43-201ENST00000285199 EIF3CLB5ME19 914 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 COPB1P53618 953 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 E2F5Q15329 346 aa17.55■□□□□ 0.4
USP43-201ENST00000285199 EIF3CQ99613 913 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
USP43-201ENST00000285199 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
USP43-201ENST00000285199 DZIP3Q86Y13 1208 aaKnown RBP17.54■□□□□ 0.4
USP43-201ENST00000285199 ZSWIM5Q9P217 1185 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 PLA2G4AP47712 749 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 IFT88Q13099 833 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 PPFIA1Q13136 1202 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
USP43-201ENST00000285199 LLGL1Q15334 1064 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.54■□□□□ 0.4
USP43-201ENST00000285199 ROBO2Q9HCK4 1378 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 VSNL1P62760 191 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 GUCY2DQ02846 1103 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 PLS1Q14651 629 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 B4GALNT4Q76KP1 1039 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 SYNE4Q8N205 404 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 KCNK9Q9NPC2 374 aa17.54■□□□□ 0.4
USP43-201ENST00000285199 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
USP43-201ENST00000285199 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
USP43-201ENST00000285199 MRRFQ96E11 262 aaKnown RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 AATFQ9NY61 560 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP43-201ENST00000285199 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 RPSAP08865 295 aaKnown RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 BCAMP50895 628 aa17.53■□□□□ 0.4
USP43-201ENST00000285199 NAA35Q5VZE5 725 aa17.53■□□□□ 0.4
USP43-201ENST00000285199 JPH2Q9BR39 696 aaPredicted RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 TNKSO95271 1327 aa17.53■□□□□ 0.4
USP43-201ENST00000285199 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
USP43-201ENST00000285199 TFRCP02786 760 aaKnown RBP17.53■□□□□ 0.4
USP43-201ENST00000285199 PPP1R12BO60237 982 aaPredicted RBP17.52■□□□□ 0.4
USP43-201ENST00000285199 BUB1BO60566 1050 aaPredicted RBP17.52■□□□□ 0.4
USP43-201ENST00000285199 GJC1P36383 396 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 USP49Q70CQ1 688 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 SLC39A2Q9NP94 309 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 TFR2Q9UP52 801 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 BICDL2A1A5D9 508 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 USP17L12C9JPN9 530 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 USP17L21D6R901 530 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
USP43-201ENST00000285199 SPATA5Q8NB90 893 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 SELENOOQ9BVL4 669 aa17.52■□□□□ 0.4
USP43-201ENST00000285199 CALML3P27482 149 aa17.52■□□□□ 0.39
USP43-201ENST00000285199 KRT71Q3SY84 523 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms