RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 CHRNA5P30532 468 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 GOLGA8FQ08AF8 430 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 GOLGA8DPQ0D2H9 430 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 KBTBD3Q8NAB2 608 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 HMG20BQ9P0W2 317 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 MCM8Q9UJA3 840 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 FAM169AQ9Y6X4 670 aa22.58■■□□□ 1.2
HOXC13-201ENST00000243056 PDCP20941 246 aa22.57■■□□□ 1.2
HOXC13-201ENST00000243056 PIH1D3Q9NQM4 214 aaKnown RBP22.57■■□□□ 1.2
HOXC13-201ENST00000243056 RBM28Q9NW13 759 aaKnown RBP22.57■■□□□ 1.2
HOXC13-201ENST00000243056 CALR3Q96L12 384 aaKnown RBP22.57■■□□□ 1.2
HOXC13-201ENST00000243056 ZSWIM6Q9HCJ5 1215 aa22.57■■□□□ 1.2
HOXC13-201ENST00000243056 RAB21Q9UL25 225 aa22.57■■□□□ 1.2
HOXC13-201ENST00000243056 NEBLO76041 1014 aa22.56■■□□□ 1.2
HOXC13-201ENST00000243056 COL9A3Q14050 684 aaPredicted RBP22.56■■□□□ 1.2
HOXC13-201ENST00000243056 CASP8Q14790 479 aa22.56■■□□□ 1.2
HOXC13-201ENST00000243056 HSP90B2PQ58FF3 399 aa22.56■■□□□ 1.2
HOXC13-201ENST00000243056 TACO1Q9BSH4 297 aaKnown RBP22.56■■□□□ 1.2
HOXC13-201ENST00000243056 PPP2R2CQ9Y2T4 447 aa22.56■■□□□ 1.2
HOXC13-201ENST00000243056 CCAR1Q8IX12 1150 aaKnown RBP22.56■■□□□ 1.2
HOXC13-201ENST00000243056 FAM84BQ96KN1 310 aaPredicted RBP22.56■■□□□ 1.2
HOXC13-201ENST00000243056 BRIP1Q9BX63 1249 aa22.56■■□□□ 1.2
HOXC13-201ENST00000243056 CYP46A1Q9Y6A2 500 aa22.56■■□□□ 1.2
HOXC13-201ENST00000243056 SRGNP10124 158 aa22.55■■□□□ 1.2
HOXC13-201ENST00000243056 GPSM2P81274 684 aa22.55■■□□□ 1.2
HOXC13-201ENST00000243056 IDH1O75874 414 aaKnown RBP22.55■■□□□ 1.2
HOXC13-201ENST00000243056 CCT5P48643 541 aa22.55■■□□□ 1.2
HOXC13-201ENST00000243056 CHMP4BP1P59074 171 aa22.55■■□□□ 1.2
HOXC13-201ENST00000243056 PRPF38AQ8NAV1 312 aaKnown RBP22.55■■□□□ 1.2
HOXC13-201ENST00000243056 ATF5Q9Y2D1 282 aaPredicted RBP22.55■■□□□ 1.2
HOXC13-201ENST00000243056 KLHL33A6NCF5 533 aa22.54■■□□□ 1.2
HOXC13-201ENST00000243056 CEBPZQ03701 1054 aaKnown RBP22.54■■□□□ 1.2
HOXC13-201ENST00000243056 NEDD9Q14511 834 aa22.54■■□□□ 1.2
HOXC13-201ENST00000243056 N4BP2L2Q92802 583 aaPredicted RBP22.54■■□□□ 1.2
HOXC13-201ENST00000243056 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
HOXC13-201ENST00000243056 ZSCAN12O43309 604 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 RNF40O75150 1001 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 RESTQ13127 1097 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 R3HDM1Q15032 1099 aaKnown RBP22.53■■□□□ 1.2
HOXC13-201ENST00000243056 SPATA5Q8NB90 893 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 AFAP1L1Q8TED9 768 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 NAT10Q9H0A0 1025 aaKnown RBP22.53■■□□□ 1.2
HOXC13-201ENST00000243056 ANKRD31Q8N7Z5 1873 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 LRRIQ3A6PVS8 624 aaPredicted RBP22.53■■□□□ 1.2
HOXC13-201ENST00000243056 ECM2O94769 699 aaPredicted RBP22.53■■□□□ 1.2
HOXC13-201ENST00000243056 PRPF40BQ6NWY9 871 aaKnown RBP22.53■■□□□ 1.2
HOXC13-201ENST00000243056 MSANTD4Q8NCY6 345 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 CD248Q9HCU0 757 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 ZNF804BA4D1E1 1349 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 RGPD3A6NKT7 1758 aaPredicted RBP22.53■■□□□ 1.2
HOXC13-201ENST00000243056 RGPD4Q7Z3J3 1758 aa22.53■■□□□ 1.2
HOXC13-201ENST00000243056 HMGB2P26583 209 aaKnown RBP22.52■■□□□ 1.2
HOXC13-201ENST00000243056 ARID4AP29374 1257 aaPredicted RBP22.52■■□□□ 1.2
HOXC13-201ENST00000243056 DHX8Q14562 1220 aaKnown RBP22.52■■□□□ 1.2
HOXC13-201ENST00000243056 DPCR1Q3MIW9 517 aa22.52■■□□□ 1.2
HOXC13-201ENST00000243056 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
HOXC13-201ENST00000243056 KLRG2A4D1S0 409 aaPredicted RBP22.52■■□□□ 1.2
HOXC13-201ENST00000243056 ERLIN1O75477 346 aa22.52■■□□□ 1.2
HOXC13-201ENST00000243056 UBE4AQ14139 1066 aa22.52■■□□□ 1.2
HOXC13-201ENST00000243056 OSBP2Q969R2 916 aa22.52■■□□□ 1.2
HOXC13-201ENST00000243056 PUF60Q9UHX1 559 aaKnown RBP22.52■■□□□ 1.2
HOXC13-201ENST00000243056 TAF6LQ9Y6J9 622 aa22.52■■□□□ 1.2
HOXC13-201ENST00000243056 CALRP27797 417 aaKnown RBP22.51■■□□□ 1.19
HOXC13-201ENST00000243056 SRGAP1Q7Z6B7 1085 aa22.51■■□□□ 1.19
HOXC13-201ENST00000243056 TMEM139Q8IV31 216 aa22.51■■□□□ 1.19
HOXC13-201ENST00000243056 UPF1Q92900 1129 aaKnown RBP eCLIP22.51■■□□□ 1.19
HOXC13-201ENST00000243056 ZKSCAN4Q969J2 545 aaPredicted RBP22.51■■□□□ 1.19
HOXC13-201ENST00000243056 AKAP11Q9UKA4 1901 aa22.51■■□□□ 1.19
HOXC13-201ENST00000243056 VSNL1P62760 191 aa22.51■■□□□ 1.19
HOXC13-201ENST00000243056 FCHSD1Q86WN1 690 aa22.51■■□□□ 1.19
HOXC13-201ENST00000243056 CTCFLQ8NI51 663 aaPredicted RBP22.51■■□□□ 1.19
HOXC13-201ENST00000243056 DDX11Q96FC9 970 aa22.51■■□□□ 1.19
HOXC13-201ENST00000243056 FTOQ9C0B1 505 aaKnown RBP eCLIP22.51■■□□□ 1.19
HOXC13-201ENST00000243056 MYO5AQ9Y4I1 1855 aaKnown RBP22.51■■□□□ 1.19
HOXC13-201ENST00000243056 H0YHG0 523 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 CUTAO60888 179 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 PRPF6O94906 941 aaKnown RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 SARNPP82979 210 aaKnown RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 SETQ01105 290 aaPredicted RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 WASHC4Q2M389 1173 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 C2CD5Q86YS7 1000 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 ENGASEQ8NFI3 743 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 VEZTQ9HBM0 779 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 A0A0G2JLW4 131 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 M0R2C6 588 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 KINO60870 393 aaKnown RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 WDHD1O75717 1129 aaPredicted RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 HOXA10P31260 410 aaPredicted RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 PTPN21Q16825 1174 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 CABS1Q96KC9 395 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 TM6SF1Q9BZW5 370 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 PUS7LQ9H0K6 701 aaKnown RBP22.5■■□□□ 1.19
HOXC13-201ENST00000243056 ABCF2Q9UG63 623 aa22.5■■□□□ 1.19
HOXC13-201ENST00000243056 MYO1FO00160 1098 aa22.49■■□□□ 1.19
HOXC13-201ENST00000243056 SYF2O95926 243 aaKnown RBP22.49■■□□□ 1.19
HOXC13-201ENST00000243056 GCFC2P16383 781 aaKnown RBP22.49■■□□□ 1.19
HOXC13-201ENST00000243056 INPP5BP32019 993 aa22.49■■□□□ 1.19
HOXC13-201ENST00000243056 SLC9C2Q5TAH2 1124 aa22.49■■□□□ 1.19
HOXC13-201ENST00000243056 RUFY2Q8WXA3 655 aa22.49■■□□□ 1.19
HOXC13-201ENST00000243056 POLLQ9UGP5 575 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms