RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 RASA1P20936 1047 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 CTNNA2P26232 953 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 DEPDC4Q8N2C3 294 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 SYNCQ9H7C4 482 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 PUF60Q9UHX1 559 aaKnown RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 ELP1O95163 1332 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 CPSF1Q10570 1443 aaKnown RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 B4E1Z4 1266 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 DDAH1O94760 285 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 CYLC1P35663 651 aaPredicted RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 SNX16P57768 344 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 KLHL40Q2TBA0 621 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 HAUS7Q99871 368 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 ASCC2Q9H1I8 757 aaPredicted RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 AZI2Q9H6S1 392 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 ZNF408Q9H9D4 720 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 SPC25Q9HBM1 224 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 MRPL11Q9Y3B7 192 aaKnown RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 M0QZ92 97 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 STX10O60499 249 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 RPS6KA4O75676 772 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 TUBB4AP04350 444 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 USP8P40818 1118 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 STRN3Q13033 797 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 TTLL7Q6ZT98 887 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 MAPKAPK5Q8IW41 473 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 BANK1Q8NDB2 785 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 ATP8A2Q9NTI2 1148 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 GCOM1H8Y6P7 765 aaPredicted RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 NOP56O00567 594 aaKnown RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 SGSM2O43147 1006 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 MYZAPP0CAP1 466 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 CCT6AP40227 531 aaKnown RBP4.78□□□□□ -1.64
CFTR-201ENST00000003084 AFMP43652 599 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 DNM2P50570 870 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 NONOQ15233 471 aaKnown RBP eCLIP4.78□□□□□ -1.64
CFTR-201ENST00000003084 PTPN14Q15678 1187 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 SUPT20HL1Q3ZLR7 823 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 ARMC9Q7Z3E5 817 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 MASTLQ96GX5 879 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 FRMD4BQ9Y2L6 1034 aa4.78□□□□□ -1.64
CFTR-201ENST00000003084 E9PCH4 1651 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 N4BP3O15049 544 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CA8P35219 290 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 BTDP43251 543 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 RELBQ01201 579 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 GRAPQ13588 217 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 UBE3CQ15386 1083 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 SWT1Q5T5J6 900 aaKnown RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 CNNM4Q6P4Q7 775 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 TMC6Q7Z403 805 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 GRAPLQ8TC17 118 aaPredicted RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 DHX58Q96C10 678 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 KDM4CQ9H3R0 1056 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 COPRSQ9NQ92 184 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 NOD1Q9Y239 953 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 MED23Q9ULK4 1368 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 KCNQ3O43525 872 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 EPB41P11171 864 aaKnown RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 GNPTABQ3T906 1256 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 AKNAD1Q5T1N1 836 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 LUZP1Q86V48 1076 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 HACE1Q8IYU2 909 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 ZSCAN10Q96SZ4 725 aaPredicted RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 TNNQ9UQP3 1299 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 RPAP1Q9BWH6 1393 aaPredicted RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 MYO3BQ8WXR4 1341 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 KDM3AQ9Y4C1 1321 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CCNT1O60563 726 aaKnown RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 CTDSPL2Q05D32 466 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 ERFEQ4G0M1 354 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 LRSAM1Q6UWE0 723 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 LEKR1Q6ZMV7 388 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 OTUD6AQ7L8S5 288 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CCDC17Q96LX7 622 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 TCHPQ9BT92 498 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 TM6SF1Q9BZW5 370 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 PGPEP1Q9NXJ5 209 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 KIAA1468Q9P260 1216 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 ASAP1Q9ULH1 1129 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CEP83Q9Y592 693 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 SNX14Q9Y5W7 946 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 PPRC1Q5VV67 1664 aaKnown RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 ABCA6Q8N139 1617 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 hCG_1984214I3L0E3 225 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 PHKA2P46019 1235 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CCNA1P78396 465 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 DSG2Q14126 1118 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 ENOX2Q16206 610 aaKnown RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 WDR44Q5JSH3 913 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CCDC129Q6ZRS4 1044 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 FAM177A1Q8N128 213 aaPredicted RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 ZNF713Q8N859 430 aaPredicted RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 KIFAP3Q92845 792 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CHAMP1Q96JM3 812 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 PANK2Q9BZ23 570 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CNPY2Q9Y2B0 182 aa4.77□□□□□ -1.65
CFTR-201ENST00000003084 CFAP65Q6ZU64 1925 aaKnown RBP4.77□□□□□ -1.65
CFTR-201ENST00000003084 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 LPXNO60711 386 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms