RNA–Protein interactions for RNA: ENSMUST00000032842.12

Ccdc90b-201, Transcript of Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc90b, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90b-201ENSMUST00000032842 Traf3ip1Q149C2 625 aa17.05■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Ckap2Q3V1H1 664 aa17.05■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Ranbp6Q8BIV3 1105 aa17.05■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Ttll1Q91V51 423 aa17.05■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Nop2Q922K7 793 aaKnown RBP17.05■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Zcchc17Q9ESX4 241 aaKnown RBP17.05■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Stag2O35638 1231 aa17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Mex3cQ05A36 652 aaKnown RBP17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Prr7Q3V0I2 269 aa17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Smarcc2Q6PDG5 1213 aa17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Gimap7Q8R379 293 aa17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 SmapQ9R0P4 181 aaKnown RBP17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 SynrgQ5SV85 1306 aa17.04■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Rgs9O54828 675 aa17.03■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Tmtc2Q56A06 836 aa17.03■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Ccdc148Q6P5U8 527 aa17.03■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Myh7bA2AQP0 1941 aa17.03■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Gm20425E9Q035 978 aaKnown RBP17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Ppef1O35655 650 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 MycnP03966 462 aaKnown RBP17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 FosbP13346 338 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 SrprbP47758 269 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Limch1Q3UH68 1057 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Cep63Q3UPP8 700 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Scfd2Q8BTY8 684 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Rtn1Q8K0T0 780 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Lrrc2Q8VDB8 371 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Eid1Q9DCR4 169 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Rcan1Q9JHG6 198 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Wdr19Q3UGF1 1341 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 Sall1Q9ER74 1322 aa17.02■□□□□ 0.32
Ccdc90b-201ENSMUST00000032842 A0A1Y7VML8 143 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Calm1P0DP26 149 aaKnown RBP17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Calm2P0DP27 149 aaKnown RBP17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Calm3P0DP28 149 aaKnown RBP17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Gtpbp6Q3U6U5 514 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Me3Q8BMF3 604 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Scfd1Q8BRF7 639 aaKnown RBP17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Gripap1Q8VD04 806 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Ubac1Q8VDI7 409 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Il21rQ9JHX3 529 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Prkab1Q9R078 270 aa17.02■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Palm3A2TJV2 734 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Irx3P81067 507 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Ttll12Q3UDE2 639 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Gprin1Q3UNH4 932 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 St18Q80TY4 1045 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Lrrc15Q80X72 579 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Zkscan1Q8BGS3 561 aaKnown RBP17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Epha10Q8BYG9 1007 aa17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Rbm19Q8R3C6 952 aaKnown RBP17.01■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Ppef2O35385 757 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Foxp1P58462 705 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Sap30bpQ02614 308 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Mdh1bQ5F204 500 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Ddx55Q6ZPL9 600 aaKnown RBP17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Ccp110Q7TSH4 1004 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Trim59Q922Y2 403 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Bloc1s2Q9CWG9 143 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Telo2Q9DC40 840 aaKnown RBP17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 UtrnE9Q6R7 3430 aa17■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Mmp10O55123 476 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Zdhhc9P59268 364 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Slc10a4Q3UEZ8 437 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Cpa2Q504N0 417 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Haus6Q6NV99 933 aaKnown RBP16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Garem2Q6PAJ3 880 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Trpv1Q704Y3 839 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 U2af1l4Q8BGJ9 220 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Spata21Q8BHW6 681 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Triml1Q8BVP1 470 aa16.99■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Gm30191A0A0U1RNT7 187 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Has3O08650 554 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Copb2O55029 905 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 ThbdP15306 577 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Kif1bpQ6ZPU9 617 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Cep57l1Q8VDS7 400 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 ZwintQ9CQU5 252 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Frmpd4A2AFR3 1320 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Aox1O54754 1333 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Zbtb21E9Q444 1094 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Babam1Q3UI43 333 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Ttbk2Q3UVR3 1243 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Kctd1Q5M956 257 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Nsrp1Q5NCR9 542 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Zfp341Q6PGC9 846 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Tbc1d5Q80XQ2 815 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Slitrk3Q810B9 980 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Cep89Q9CZX2 791 aa16.98■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Usp31E9Q6Y8 1344 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 PtpraP18052 829 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Cplx2P84086 134 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Lilrb3P97484 841 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Armc2Q3URY6 854 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Cdkl5Q3UTQ8 938 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Nlgn2Q69ZK9 836 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Senp5Q6NXL6 749 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Lca5Q80ST9 704 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Terf2ipQ91VL8 393 aa16.97■□□□□ 0.31
Ccdc90b-201ENSMUST00000032842 Mrpl44Q9CY73 333 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms