Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm25239-201ENSMUST00000174915 86 ntBASIC46.05■■■■■ 4.96
Ddx55Q6ZPL9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.74■■■■■ 4.43
Ddx55Q6ZPL9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.07■■■■■ 4.33
Ddx55Q6ZPL9 Gm24109-201ENSMUST00000175489 103 ntBASIC40.08■■■■■ 4.01
Ddx55Q6ZPL9 Gm15042-201ENSMUST00000120212 883 ntBASIC39.92■■■■□ 3.98
Ddx55Q6ZPL9 Gm15045-201ENSMUST00000117359 883 ntBASIC39■■■■□ 3.83
Ddx55Q6ZPL9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
Ddx55Q6ZPL9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
Ddx55Q6ZPL9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
Ddx55Q6ZPL9 Gm23366-201ENSMUST00000175022 89 ntBASIC38.39■■■■□ 3.74
Ddx55Q6ZPL9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Ddx55Q6ZPL9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Ddx55Q6ZPL9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.48■■■■□ 3.59
Ddx55Q6ZPL9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Ddx55Q6ZPL9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Ddx55Q6ZPL9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.17■■■■□ 3.54
Ddx55Q6ZPL9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.11■■■■□ 3.53
Ddx55Q6ZPL9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Ddx55Q6ZPL9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.91■■■■□ 3.5
Ddx55Q6ZPL9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Ddx55Q6ZPL9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Ddx55Q6ZPL9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Ddx55Q6ZPL9 Gm25238-201ENSMUST00000174914 89 ntBASIC36.47■■■■□ 3.43
Ddx55Q6ZPL9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.46■■■■□ 3.43
Ddx55Q6ZPL9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.45■■■■□ 3.43
Ddx55Q6ZPL9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
Ddx55Q6ZPL9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Ddx55Q6ZPL9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.13■■■■□ 3.37
Ddx55Q6ZPL9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Ddx55Q6ZPL9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Ddx55Q6ZPL9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.32
Ddx55Q6ZPL9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
Ddx55Q6ZPL9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.75■■■■□ 3.31
Ddx55Q6ZPL9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
Ddx55Q6ZPL9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.52■■■■□ 3.28
Ddx55Q6ZPL9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
Ddx55Q6ZPL9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.35■■■■□ 3.25
Ddx55Q6ZPL9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.28■■■■□ 3.24
Ddx55Q6ZPL9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Ddx55Q6ZPL9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Ddx55Q6ZPL9 Gm25262-201ENSMUST00000174934 133 ntBASIC35.07■■■■□ 3.2
Ddx55Q6ZPL9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ddx55Q6ZPL9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.94■■■■□ 3.18
Ddx55Q6ZPL9 Gm27325-201ENSMUST00000175467 74 ntBASIC34.93■■■■□ 3.18
Ddx55Q6ZPL9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ddx55Q6ZPL9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.68■■■■□ 3.14
Ddx55Q6ZPL9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ddx55Q6ZPL9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Ddx55Q6ZPL9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.59■■■■□ 3.13
Ddx55Q6ZPL9 Rab21-202ENSMUST00000218831 843 ntBASIC34.51■■■■□ 3.12
Ddx55Q6ZPL9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.44■■■■□ 3.1
Ddx55Q6ZPL9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.43■■■■□ 3.1
Ddx55Q6ZPL9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
Ddx55Q6ZPL9 Psd-208ENSMUST00000224556 2034 ntBASIC34.39■■■■□ 3.1
Ddx55Q6ZPL9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ddx55Q6ZPL9 Gm26115-201ENSMUST00000175605 87 ntBASIC34.33■■■■□ 3.09
Ddx55Q6ZPL9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Ddx55Q6ZPL9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ddx55Q6ZPL9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.17■■■■□ 3.06
Ddx55Q6ZPL9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Ddx55Q6ZPL9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Ddx55Q6ZPL9 Gm8109-201ENSMUST00000194076 746 ntBASIC34.11■■■■□ 3.05
Ddx55Q6ZPL9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.1■■■■□ 3.05
Ddx55Q6ZPL9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Ddx55Q6ZPL9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
Ddx55Q6ZPL9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.08■■■■□ 3.05
Ddx55Q6ZPL9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.02■■■■□ 3.04
Ddx55Q6ZPL9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ddx55Q6ZPL9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.84■■■■□ 3.01
Ddx55Q6ZPL9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ddx55Q6ZPL9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.79■■■■□ 3
Ddx55Q6ZPL9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.76■■■□□ 2.99
Ddx55Q6ZPL9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
Ddx55Q6ZPL9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Ddx55Q6ZPL9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Ddx55Q6ZPL9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.64■■■□□ 2.98
Ddx55Q6ZPL9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Ddx55Q6ZPL9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Ddx55Q6ZPL9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ddx55Q6ZPL9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Ddx55Q6ZPL9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
Ddx55Q6ZPL9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ddx55Q6ZPL9 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.36■■■□□ 2.93
Ddx55Q6ZPL9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.36■■■□□ 2.93
Ddx55Q6ZPL9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
Ddx55Q6ZPL9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Ddx55Q6ZPL9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ddx55Q6ZPL9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ddx55Q6ZPL9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.22■■■□□ 2.91
Ddx55Q6ZPL9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.21■■■□□ 2.91
Ddx55Q6ZPL9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Ddx55Q6ZPL9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Ddx55Q6ZPL9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.17■■■□□ 2.9
Ddx55Q6ZPL9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.14■■■□□ 2.9
Ddx55Q6ZPL9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ddx55Q6ZPL9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ddx55Q6ZPL9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
Ddx55Q6ZPL9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx55Q6ZPL9 Gm24804-201ENSMUST00000174982 85 ntBASIC33.01■■■□□ 2.87
Ddx55Q6ZPL9 Gm27322-201ENSMUST00000184007 104 ntBASIC32.99■■■□□ 2.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms