RNA–Protein interactions for RNA: ENSMUST00000216313.1

Sparc-209, Transcript of SPARC, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Sparc, Length 1,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sparc-209ENSMUST00000216313 Gm45337A0A1B0GS71 263 aa4.27□□□□□ -1.73
Sparc-209ENSMUST00000216313 Gm21887J3QQ04 176 aa4.26□□□□□ -1.73
Sparc-209ENSMUST00000216313 Krtap19-9bQ99NG9 58 aa4.25□□□□□ -1.73
Sparc-209ENSMUST00000216313 Gm17402F6Z0L5 76 aa4.22□□□□□ -1.73
Sparc-209ENSMUST00000216313 Syne1Q6ZWR6 8799 aa4.21□□□□□ -1.74
Sparc-209ENSMUST00000216313 DstQ91ZU6 7393 aaKnown RBP4.17□□□□□ -1.74
Sparc-209ENSMUST00000216313 Hmcn1D3YXG0 5634 aa4.14□□□□□ -1.75
Sparc-209ENSMUST00000216313 Gm39115A0A1B0GSH7 232 aa4.14□□□□□ -1.75
Sparc-209ENSMUST00000216313 4933415A04RikQ9D443 101 aa4.14□□□□□ -1.75
Sparc-209ENSMUST00000216313 H2al1kJ3QP08 105 aa4.13□□□□□ -1.75
Sparc-209ENSMUST00000216313 NebE9Q1W3 7152 aa4.12□□□□□ -1.75
Sparc-209ENSMUST00000216313 Lce3bQ9CQM7 98 aa4.12□□□□□ -1.75
Sparc-209ENSMUST00000216313 Gm40460A0A1B0GR10 244 aa4.1□□□□□ -1.75
Sparc-209ENSMUST00000216313 Gm7579A0A1B0GRJ4 243 aa4.1□□□□□ -1.75
Sparc-209ENSMUST00000216313 Krtap5-5Q2TA51 241 aa4.1□□□□□ -1.75
Sparc-209ENSMUST00000216313 Krtap5-4Q62220 223 aa4.1□□□□□ -1.75
Sparc-209ENSMUST00000216313 H2al1mQ9DAD9 105 aa4.09□□□□□ -1.75
Sparc-209ENSMUST00000216313 Gm10337F7DEP7 55 aa4.08□□□□□ -1.76
Sparc-209ENSMUST00000216313 Krtap4-16Q91W93 202 aa4.08□□□□□ -1.76
Sparc-209ENSMUST00000216313 Gm10153A0A1B0GRL1 320 aa4.07□□□□□ -1.76
Sparc-209ENSMUST00000216313 Lce1fB9EJP6 147 aa4.06□□□□□ -1.76
Sparc-209ENSMUST00000216313 Lce1cQ9D1C5 147 aa4.06□□□□□ -1.76
Sparc-209ENSMUST00000216313 Krtap19-4Q925H7 84 aa3.98□□□□□ -1.77
Sparc-209ENSMUST00000216313 Ndufs5Q99LY9 106 aa3.98□□□□□ -1.77
Sparc-209ENSMUST00000216313 Gm45618A0A1B0GSA0 219 aa3.96□□□□□ -1.77
Sparc-209ENSMUST00000216313 Gm3646F6S692 53 aa3.95□□□□□ -1.78
Sparc-209ENSMUST00000216313 Gm3880A0A1B0GSB3 72 aa3.93□□□□□ -1.78
Sparc-209ENSMUST00000216313 Gm10272F7CZ33 110 aa3.93□□□□□ -1.78
Sparc-209ENSMUST00000216313 Gm12216A0A1W2P827 62 aa3.87□□□□□ -1.79
Sparc-209ENSMUST00000216313 Mt1P02802 61 aaKnown RBP3.85□□□□□ -1.79
Sparc-209ENSMUST00000216313 Gm11938Q9D3H4 131 aa3.85□□□□□ -1.79
Sparc-209ENSMUST00000216313 Sprr2fO70557 76 aa3.83□□□□□ -1.8
Sparc-209ENSMUST00000216313 Camk2n1Q6QWF9 78 aa3.83□□□□□ -1.8
Sparc-209ENSMUST00000216313 Romo1P60603 79 aa3.8□□□□□ -1.8
Sparc-209ENSMUST00000216313 Krtap7-1Q9D3I6 87 aa3.76□□□□□ -1.81
Sparc-209ENSMUST00000216313 AhnakE9Q616 5656 aaKnown RBP3.75□□□□□ -1.81
Sparc-209ENSMUST00000216313 Mt3P28184 68 aa3.59□□□□□ -1.83
Sparc-209ENSMUST00000216313 Lce3cQ91V05 98 aa3.54□□□□□ -1.84
Sparc-209ENSMUST00000216313 Gm40193A0A1B0GT39 78 aa3.53□□□□□ -1.84
Sparc-209ENSMUST00000216313 Lce3dE9Q8V1 98 aa3.47□□□□□ -1.85
Sparc-209ENSMUST00000216313 A0A1Y7VLE6 161 aa3.46□□□□□ -1.85
Sparc-209ENSMUST00000216313 Tnp1P10856 55 aa3.45□□□□□ -1.86
Sparc-209ENSMUST00000216313 Gm10100J3QK64 120 aa3.39□□□□□ -1.87
Sparc-209ENSMUST00000216313 ObscnA2AAJ9 8891 aaKnown RBP3.36□□□□□ -1.87
Sparc-209ENSMUST00000216313 Lce3eF8VQJ0 98 aa3.3□□□□□ -1.88
Sparc-209ENSMUST00000216313 Lce3fQ6PAI4 98 aa3.3□□□□□ -1.88
Sparc-209ENSMUST00000216313 Mp68P56379 58 aa3.29□□□□□ -1.88
Sparc-209ENSMUST00000216313 Krtap28-10A0A1Y7VP58 119 aa3.26□□□□□ -1.89
Sparc-209ENSMUST00000216313 Krtap28-13A0A087WQP5 138 aa3.25□□□□□ -1.89
Sparc-209ENSMUST00000216313 Krtap31-2Q8CAY5 177 aa3.25□□□□□ -1.89
Sparc-209ENSMUST00000216313 Gm20538F6Z9R1 75 aa3.21□□□□□ -1.89
Sparc-209ENSMUST00000216313 A030005K14RikA0A1Y7VNY1 122 aa3.19□□□□□ -1.9
Sparc-209ENSMUST00000216313 Krtap31-1Q9D644 177 aa3.16□□□□□ -1.9
Sparc-209ENSMUST00000216313 Lce3aQ497I5 98 aa3.15□□□□□ -1.91
Sparc-209ENSMUST00000216313 4933428G20RikQ9D3X4 101 aa3.13□□□□□ -1.91
Sparc-209ENSMUST00000216313 Sprr2eO70556 76 aa3.11□□□□□ -1.91
Sparc-209ENSMUST00000216313 Sprr2hO70559 108 aa3.08□□□□□ -1.92
Sparc-209ENSMUST00000216313 A0A1Y7VJ07 166 aa3.04□□□□□ -1.92
Sparc-209ENSMUST00000216313 Gm10024A0A0A0MQA4 119 aa3.01□□□□□ -1.93
Sparc-209ENSMUST00000216313 Gm29735A0A1B0GT06 219 aa2.97□□□□□ -1.93
Sparc-209ENSMUST00000216313 Muc16A0A140LJ72 8478 aa2.97□□□□□ -1.93
Sparc-209ENSMUST00000216313 Sprr2dO70555 85 aa2.93□□□□□ -1.94
Sparc-209ENSMUST00000216313 Gm7544A0A1Y7VJ58 118 aa2.92□□□□□ -1.94
Sparc-209ENSMUST00000216313 A030014E15RikA0A1Y7VJV2 120 aa2.85□□□□□ -1.95
Sparc-209ENSMUST00000216313 Gm11567Q9D141 195 aa2.79□□□□□ -1.96
Sparc-209ENSMUST00000216313 Gm10142J3KMP7 120 aa2.77□□□□□ -1.97
Sparc-209ENSMUST00000216313 Ndufaf8A2AMZ4 74 aa2.76□□□□□ -1.97
Sparc-209ENSMUST00000216313 A030003K21RikA0A1Y7VIM3 128 aa2.67□□□□□ -1.98
Sparc-209ENSMUST00000216313 Gm9112A2AI92 75 aa2.67□□□□□ -1.98
Sparc-209ENSMUST00000216313 1110025L11RikO09048 78 aa2.65□□□□□ -1.99
Sparc-209ENSMUST00000216313 Krtap6-5Q925H3 78 aa2.65□□□□□ -1.99
Sparc-209ENSMUST00000216313 A0A286YCP9 139 aa2.54□□□□□ -2
Sparc-209ENSMUST00000216313 Krtap5-1Q64507 230 aa2.52□□□□□ -2.01
Sparc-209ENSMUST00000216313 Gm6217A0A1Y7VJK9 128 aa2.41□□□□□ -2.02
Sparc-209ENSMUST00000216313 Gm10229O08631 77 aa2.4□□□□□ -2.03
Sparc-209ENSMUST00000216313 Sprr2bO70554 98 aa2.35□□□□□ -2.03
Sparc-209ENSMUST00000216313 Krtap6-2O08884 159 aa2.21□□□□□ -2.06
Sparc-209ENSMUST00000216313 Krtap21-1Q925H4 128 aa2.13□□□□□ -2.07
Sparc-209ENSMUST00000216313 Gm4559A4IF42 199 aa1.74□□□□□ -2.13
Sparc-209ENSMUST00000216313 Phgr1Q8K0G7 91 aa1.71□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 109.2 ms