RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gm3880A0A1B0GSB3 72 aa7.43□□□□□ -1.22
Pcf11-204ENSMUST00000208058 Gm2431E9Q8S1 172 aa7.43□□□□□ -1.22
Pcf11-204ENSMUST00000208058 Gm10272F7CZ33 110 aa7.41□□□□□ -1.22
Pcf11-204ENSMUST00000208058 H2al1kJ3QP08 105 aa7.37□□□□□ -1.23
Pcf11-204ENSMUST00000208058 Krtap7-1Q9D3I6 87 aa7.35□□□□□ -1.23
Pcf11-204ENSMUST00000208058 Gm45337A0A1B0GS71 263 aa7.33□□□□□ -1.24
Pcf11-204ENSMUST00000208058 H2al1mQ9DAD9 105 aa7.29□□□□□ -1.24
Pcf11-204ENSMUST00000208058 Lce1fB9EJP6 147 aa7.27□□□□□ -1.25
Pcf11-204ENSMUST00000208058 Lce1cQ9D1C5 147 aa7.27□□□□□ -1.25
Pcf11-204ENSMUST00000208058 Muc19Q6PZE0 7524 aa7.27□□□□□ -1.25
Pcf11-204ENSMUST00000208058 Gpr98Q8VHN7 6298 aaKnown RBP7.17□□□□□ -1.26
Pcf11-204ENSMUST00000208058 Gm10153A0A1B0GRL1 320 aa7.11□□□□□ -1.27
Pcf11-204ENSMUST00000208058 4933415A04RikQ9D443 101 aa7.07□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Hmcn1D3YXG0 5634 aa7.06□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Gm40460A0A1B0GR10 244 aa7.06□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Gm7579A0A1B0GRJ4 243 aa7.06□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Krtap5-5Q2TA51 241 aa7.06□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Krtap5-4Q62220 223 aa7.06□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Ndufs5Q99LY9 106 aa7.06□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Gm12216A0A1W2P827 62 aa7.03□□□□□ -1.28
Pcf11-204ENSMUST00000208058 Gm11938Q9D3H4 131 aa7.02□□□□□ -1.29
Pcf11-204ENSMUST00000208058 Krtap19-4Q925H7 84 aa7.01□□□□□ -1.29
Pcf11-204ENSMUST00000208058 Mt1P02802 61 aaKnown RBP6.99□□□□□ -1.29
Pcf11-204ENSMUST00000208058 Gm39115A0A1B0GSH7 232 aa6.98□□□□□ -1.29
Pcf11-204ENSMUST00000208058 Sox16Q62247 57 aa6.96□□□□□ -1.3
Pcf11-204ENSMUST00000208058 DstQ91ZU6 7393 aaKnown RBP6.93□□□□□ -1.3
Pcf11-204ENSMUST00000208058 Romo1P60603 79 aa6.91□□□□□ -1.3
Pcf11-204ENSMUST00000208058 Gm3646F6S692 53 aa6.81□□□□□ -1.32
Pcf11-204ENSMUST00000208058 NebE9Q1W3 7152 aa6.72□□□□□ -1.33
Pcf11-204ENSMUST00000208058 Lce3cQ91V05 98 aa6.67□□□□□ -1.34
Pcf11-204ENSMUST00000208058 Krtap4-16Q91W93 202 aa6.62□□□□□ -1.35
Pcf11-204ENSMUST00000208058 Tnp1P10856 55 aa6.61□□□□□ -1.35
Pcf11-204ENSMUST00000208058 Gm45618A0A1B0GSA0 219 aa6.56□□□□□ -1.36
Pcf11-204ENSMUST00000208058 Lce3dE9Q8V1 98 aa6.56□□□□□ -1.36
Pcf11-204ENSMUST00000208058 Pcp4P63054 62 aa6.54□□□□□ -1.36
Pcf11-204ENSMUST00000208058 Mt3P28184 68 aa6.46□□□□□ -1.38
Pcf11-204ENSMUST00000208058 Sprr2fO70557 76 aa6.45□□□□□ -1.38
Pcf11-204ENSMUST00000208058 ObscnA2AAJ9 8891 aaKnown RBP6.43□□□□□ -1.38
Pcf11-204ENSMUST00000208058 Gm10337F7DEP7 55 aa6.38□□□□□ -1.39
Pcf11-204ENSMUST00000208058 AhnakE9Q616 5656 aaKnown RBP6.38□□□□□ -1.39
Pcf11-204ENSMUST00000208058 Lce3eF8VQJ0 98 aa6.33□□□□□ -1.4
Pcf11-204ENSMUST00000208058 Lce3fQ6PAI4 98 aa6.33□□□□□ -1.4
Pcf11-204ENSMUST00000208058 Gm40193A0A1B0GT39 78 aa6.28□□□□□ -1.4
Pcf11-204ENSMUST00000208058 A0A1Y7VLE6 161 aa6.17□□□□□ -1.42
Pcf11-204ENSMUST00000208058 Gm10100J3QK64 120 aa6.13□□□□□ -1.43
Pcf11-204ENSMUST00000208058 4933428G20RikQ9D3X4 101 aa6.1□□□□□ -1.43
Pcf11-204ENSMUST00000208058 Lce3aQ497I5 98 aa6.05□□□□□ -1.44
Pcf11-204ENSMUST00000208058 SvipQ3UZP4 77 aa5.93□□□□□ -1.46
Pcf11-204ENSMUST00000208058 Sprr2dO70555 85 aa5.88□□□□□ -1.47
Pcf11-204ENSMUST00000208058 Sprr2eO70556 76 aa5.67□□□□□ -1.5
Pcf11-204ENSMUST00000208058 Mp68P56379 58 aa5.56□□□□□ -1.52
Pcf11-204ENSMUST00000208058 Gm10024A0A0A0MQA4 119 aa5.52□□□□□ -1.53
Pcf11-204ENSMUST00000208058 A0A1Y7VJ07 166 aa5.28□□□□□ -1.56
Pcf11-204ENSMUST00000208058 Muc16A0A140LJ72 8478 aa5.27□□□□□ -1.57
Pcf11-204ENSMUST00000208058 Gm20538F6Z9R1 75 aa5.2□□□□□ -1.58
Pcf11-204ENSMUST00000208058 Gm29735A0A1B0GT06 219 aa5.18□□□□□ -1.58
Pcf11-204ENSMUST00000208058 Gm10142J3KMP7 120 aa5.18□□□□□ -1.58
Pcf11-204ENSMUST00000208058 Sprr2hO70559 108 aa5.18□□□□□ -1.58
Pcf11-204ENSMUST00000208058 1110025L11RikO09048 78 aa4.96□□□□□ -1.62
Pcf11-204ENSMUST00000208058 Krtap6-5Q925H3 78 aa4.96□□□□□ -1.62
Pcf11-204ENSMUST00000208058 Gm11567Q9D141 195 aa4.84□□□□□ -1.63
Pcf11-204ENSMUST00000208058 Gm10229O08631 77 aa4.46□□□□□ -1.7
Pcf11-204ENSMUST00000208058 Krtap31-2Q8CAY5 177 aa4.35□□□□□ -1.71
Pcf11-204ENSMUST00000208058 A030003K21RikA0A1Y7VIM3 128 aa4.18□□□□□ -1.74
Pcf11-204ENSMUST00000208058 Krtap28-10A0A1Y7VP58 119 aa4.16□□□□□ -1.74
Pcf11-204ENSMUST00000208058 Krtap28-13A0A087WQP5 138 aa4.06□□□□□ -1.76
Pcf11-204ENSMUST00000208058 Krtap5-1Q64507 230 aa4.06□□□□□ -1.76
Pcf11-204ENSMUST00000208058 Ndufaf8A2AMZ4 74 aa4.05□□□□□ -1.76
Pcf11-204ENSMUST00000208058 A030005K14RikA0A1Y7VNY1 122 aa4.04□□□□□ -1.76
Pcf11-204ENSMUST00000208058 Sprr2bO70554 98 aa4.03□□□□□ -1.76
Pcf11-204ENSMUST00000208058 Krtap6-2O08884 159 aa4.02□□□□□ -1.77
Pcf11-204ENSMUST00000208058 Krtap31-1Q9D644 177 aa4.02□□□□□ -1.77
Pcf11-204ENSMUST00000208058 Krtap21-1Q925H4 128 aa3.99□□□□□ -1.77
Pcf11-204ENSMUST00000208058 Gm7544A0A1Y7VJ58 118 aa3.91□□□□□ -1.78
Pcf11-204ENSMUST00000208058 A030014E15RikA0A1Y7VJV2 120 aa3.81□□□□□ -1.8
Pcf11-204ENSMUST00000208058 A0A286YCP9 139 aa3.51□□□□□ -1.85
Pcf11-204ENSMUST00000208058 Gm6217A0A1Y7VJK9 128 aa3.39□□□□□ -1.87
Pcf11-204ENSMUST00000208058 Gm9112A2AI92 75 aa3.38□□□□□ -1.87
Pcf11-204ENSMUST00000208058 Phgr1Q8K0G7 91 aa3.2□□□□□ -1.9
Pcf11-204ENSMUST00000208058 Gm4559A4IF42 199 aa3□□□□□ -1.93
Retrieved 80 of 22,080 RNA–protein pairs in 10.3 ms