RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Ryr1E9PZQ0 5035 aa3.67□□□□□ -1.82
Fn1-211ENSMUST00000187938 Gm11554B1AQB2 190 aa3.66□□□□□ -1.82
Fn1-211ENSMUST00000187938 Krtap6-3A0A087WQL6 57 aa3.65□□□□□ -1.83
Fn1-211ENSMUST00000187938 Fsip2A2ARZ3 6995 aa3.57□□□□□ -1.84
Fn1-211ENSMUST00000187938 Fat2Q5F226 4351 aa3.5□□□□□ -1.85
Fn1-211ENSMUST00000187938 Pkhd1l1Q80ZA4 4249 aa3.47□□□□□ -1.85
Fn1-211ENSMUST00000187938 Lrp2A2ARV4 4660 aa3.46□□□□□ -1.86
Fn1-211ENSMUST00000187938 Syne2Q6ZWQ0 6874 aaKnown RBP3.43□□□□□ -1.86
Fn1-211ENSMUST00000187938 Ryr3A2AGL3 4863 aa3.42□□□□□ -1.86
Fn1-211ENSMUST00000187938 Herc1E9PZP8 4859 aa3.39□□□□□ -1.87
Fn1-211ENSMUST00000187938 Krtap4-16Q91W93 202 aa3.38□□□□□ -1.87
Fn1-211ENSMUST00000187938 PcloQ9QYX7 5068 aa3.38□□□□□ -1.87
Fn1-211ENSMUST00000187938 Kmt2cQ8BRH4 4903 aa3.31□□□□□ -1.88
Fn1-211ENSMUST00000187938 Ryr2E9Q401 4966 aaKnown RBP3.24□□□□□ -1.89
Fn1-211ENSMUST00000187938 Muc5bE9Q5I3 4800 aa3.24□□□□□ -1.89
Fn1-211ENSMUST00000187938 Mdn1A2ANY6 5589 aaKnown RBP3.2□□□□□ -1.9
Fn1-211ENSMUST00000187938 Krtap20-2E9Q0A8 60 aa3.19□□□□□ -1.9
Fn1-211ENSMUST00000187938 Gm11555B1AQ89 175 aa3.1□□□□□ -1.91
Fn1-211ENSMUST00000187938 Mt1P02802 61 aaKnown RBP3.08□□□□□ -1.92
Fn1-211ENSMUST00000187938 Syne1Q6ZWR6 8799 aa3.06□□□□□ -1.92
Fn1-211ENSMUST00000187938 Eppk1Q8R0W0 6548 aa3.05□□□□□ -1.92
Fn1-211ENSMUST00000187938 ZanO88799 5376 aa2.99□□□□□ -1.93
Fn1-211ENSMUST00000187938 Birc6O88738 4882 aa2.95□□□□□ -1.94
Fn1-211ENSMUST00000187938 HydinQ80W93 5154 aa2.93□□□□□ -1.94
Fn1-211ENSMUST00000187938 4932415D10RikA0A1W2P6U8 4986 aa2.9□□□□□ -1.95
Fn1-211ENSMUST00000187938 Kiaa1109A2AAE1 5005 aa2.85□□□□□ -1.95
Fn1-211ENSMUST00000187938 Ubr4A2AN08 5180 aa2.82□□□□□ -1.96
Fn1-211ENSMUST00000187938 Hmcn2A2AJ76 5100 aa2.78□□□□□ -1.96
Fn1-211ENSMUST00000187938 ObscnA2AAJ9 8891 aaKnown RBP2.78□□□□□ -1.96
Fn1-211ENSMUST00000187938 Fat4Q2PZL6 4981 aa2.73□□□□□ -1.97
Fn1-211ENSMUST00000187938 NebE9Q1W3 7152 aa2.66□□□□□ -1.98
Fn1-211ENSMUST00000187938 Abca13Q5SSE9 5034 aa2.64□□□□□ -1.99
Fn1-211ENSMUST00000187938 DstQ91ZU6 7393 aaKnown RBP2.6□□□□□ -1.99
Fn1-211ENSMUST00000187938 Gm10229O08631 77 aa2.6□□□□□ -1.99
Fn1-211ENSMUST00000187938 1110025L11RikO09048 78 aa2.6□□□□□ -1.99
Fn1-211ENSMUST00000187938 Phgr1Q8K0G7 91 aa2.6□□□□□ -1.99
Fn1-211ENSMUST00000187938 Krtap6-5Q925H3 78 aa2.6□□□□□ -1.99
Fn1-211ENSMUST00000187938 Macf1Q9QXZ0 7354 aaKnown RBP2.58□□□□□ -2
Fn1-211ENSMUST00000187938 SspoQ8CG65 4998 aa2.52□□□□□ -2.01
Fn1-211ENSMUST00000187938 Rnf213E9Q555 5152 aaKnown RBP2.51□□□□□ -2.01
Fn1-211ENSMUST00000187938 Gm11559Q9D3H7 191 aa2.45□□□□□ -2.02
Fn1-211ENSMUST00000187938 Kmt2dQ6PDK2 5588 aa2.27□□□□□ -2.05
Fn1-211ENSMUST00000187938 Muc16A0A140LJ72 8478 aa2.27□□□□□ -2.05
Fn1-211ENSMUST00000187938 Ush2AQ2QI47 5193 aa2.23□□□□□ -2.05
Fn1-211ENSMUST00000187938 Muc19Q6PZE0 7524 aa2.15□□□□□ -2.07
Fn1-211ENSMUST00000187938 Krtap9-1Q64526 186 aa2.15□□□□□ -2.07
Fn1-211ENSMUST00000187938 Gm11568A2A4M2 211 aa2.13□□□□□ -2.07
Fn1-211ENSMUST00000187938 Gpr98Q8VHN7 6298 aaKnown RBP2.1□□□□□ -2.07
Fn1-211ENSMUST00000187938 Krtap6-2O08884 159 aa2.02□□□□□ -2.09
Fn1-211ENSMUST00000187938 Gm11567Q9D141 195 aa1.89□□□□□ -2.11
Fn1-211ENSMUST00000187938 Gm11639A0A1D5RLM8 5808 aa1.87□□□□□ -2.11
Fn1-211ENSMUST00000187938 Gm2431E9Q8S1 172 aa1.75□□□□□ -2.13
Fn1-211ENSMUST00000187938 Krtap5-2Q9D5Z7 189 aa1.69□□□□□ -2.14
Fn1-211ENSMUST00000187938 Krtap21-1Q925H4 128 aa1.65□□□□□ -2.15
Fn1-211ENSMUST00000187938 Gm4553A0A1B0GSA9 284 aa1.65□□□□□ -2.15
Fn1-211ENSMUST00000187938 A030005L19RikA0A1Y7VIU2 113 aa1.61□□□□□ -2.15
Fn1-211ENSMUST00000187938 Hmcn1D3YXG0 5634 aa1.58□□□□□ -2.16
Fn1-211ENSMUST00000187938 Krtap28-10A0A1Y7VP58 119 aa1.48□□□□□ -2.17
Fn1-211ENSMUST00000187938 A030005K14RikA0A1Y7VNY1 122 aa1.46□□□□□ -2.18
Fn1-211ENSMUST00000187938 A0A1Y7VJ07 166 aa1.45□□□□□ -2.18
Fn1-211ENSMUST00000187938 Gm7579A0A1B0GRJ4 243 aa1.43□□□□□ -2.18
Fn1-211ENSMUST00000187938 Krtap28-13A0A087WQP5 138 aa1.41□□□□□ -2.18
Fn1-211ENSMUST00000187938 A030014E15RikA0A1Y7VJV2 120 aa1.39□□□□□ -2.19
Fn1-211ENSMUST00000187938 AhnakE9Q616 5656 aaKnown RBP1.38□□□□□ -2.19
Fn1-211ENSMUST00000187938 A0A1Y7VJH8 109 aa1.37□□□□□ -2.19
Fn1-211ENSMUST00000187938 Krtap5-4Q62220 223 aa1.37□□□□□ -2.19
Fn1-211ENSMUST00000187938 A0A1Y7VLE6 161 aa1.35□□□□□ -2.19
Fn1-211ENSMUST00000187938 Gm7544A0A1Y7VJ58 118 aa1.31□□□□□ -2.2
Fn1-211ENSMUST00000187938 A030003K21RikA0A1Y7VIM3 128 aa1.27□□□□□ -2.21
Fn1-211ENSMUST00000187938 Gm45337A0A1B0GS71 263 aa1.25□□□□□ -2.21
Fn1-211ENSMUST00000187938 A0A286YCP9 139 aa1.25□□□□□ -2.21
Fn1-211ENSMUST00000187938 Gm40460A0A1B0GR10 244 aa1.24□□□□□ -2.21
Fn1-211ENSMUST00000187938 Krtap5-5Q2TA51 241 aa1.24□□□□□ -2.21
Fn1-211ENSMUST00000187938 Gm6217A0A1Y7VJK9 128 aa1.23□□□□□ -2.21
Fn1-211ENSMUST00000187938 Gm39115A0A1B0GSH7 232 aa1.21□□□□□ -2.22
Fn1-211ENSMUST00000187938 Gm10153A0A1B0GRL1 320 aa1.19□□□□□ -2.22
Fn1-211ENSMUST00000187938 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Fn1-211ENSMUST00000187938 Gm45618A0A1B0GSA0 219 aa1.12□□□□□ -2.23
Fn1-211ENSMUST00000187938 Gm29735A0A1B0GT06 219 aa0.94□□□□□ -2.26
Fn1-211ENSMUST00000187938 Gm4559A4IF42 199 aa0.68□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 872.7 ms