RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Gm11563B1AQ90 168 aa3.02□□□□□ -1.93
Cux1-204ENSMUST00000175975 Gm11595B1AQA7 289 aa3.02□□□□□ -1.93
Cux1-204ENSMUST00000175975 Krtap4-8B1AQA8 209 aa3.02□□□□□ -1.93
Cux1-204ENSMUST00000175975 PcloQ9QYX7 5068 aa3.02□□□□□ -1.93
Cux1-204ENSMUST00000175975 Krtap4-16Q91W93 202 aa2.99□□□□□ -1.93
Cux1-204ENSMUST00000175975 Kmt2cQ8BRH4 4903 aa2.93□□□□□ -1.94
Cux1-204ENSMUST00000175975 Syne1Q6ZWR6 8799 aa2.88□□□□□ -1.95
Cux1-204ENSMUST00000175975 Lrp2A2ARV4 4660 aa2.87□□□□□ -1.95
Cux1-204ENSMUST00000175975 ZanO88799 5376 aa2.87□□□□□ -1.95
Cux1-204ENSMUST00000175975 Syne2Q6ZWQ0 6874 aaKnown RBP2.87□□□□□ -1.95
Cux1-204ENSMUST00000175975 Herc2Q4U2R1 4836 aa2.86□□□□□ -1.95
Cux1-204ENSMUST00000175975 Gm11554B1AQB2 190 aa2.86□□□□□ -1.95
Cux1-204ENSMUST00000175975 Krtap6-3A0A087WQL6 57 aa2.82□□□□□ -1.96
Cux1-204ENSMUST00000175975 Fsip2A2ARZ3 6995 aa2.78□□□□□ -1.96
Cux1-204ENSMUST00000175975 Ryr3A2AGL3 4863 aa2.77□□□□□ -1.97
Cux1-204ENSMUST00000175975 ObscnA2AAJ9 8891 aaKnown RBP2.76□□□□□ -1.97
Cux1-204ENSMUST00000175975 Herc1E9PZP8 4859 aa2.73□□□□□ -1.97
Cux1-204ENSMUST00000175975 Ryr2E9Q401 4966 aaKnown RBP2.63□□□□□ -1.99
Cux1-204ENSMUST00000175975 Muc5bE9Q5I3 4800 aa2.56□□□□□ -2
Cux1-204ENSMUST00000175975 Kiaa1109A2AAE1 5005 aa2.55□□□□□ -2
Cux1-204ENSMUST00000175975 Ubr4A2AN08 5180 aa2.52□□□□□ -2.01
Cux1-204ENSMUST00000175975 Krtap20-2E9Q0A8 60 aa2.52□□□□□ -2.01
Cux1-204ENSMUST00000175975 HydinQ80W93 5154 aa2.5□□□□□ -2.01
Cux1-204ENSMUST00000175975 Birc6O88738 4882 aa2.5□□□□□ -2.01
Cux1-204ENSMUST00000175975 Mdn1A2ANY6 5589 aaKnown RBP2.46□□□□□ -2.02
Cux1-204ENSMUST00000175975 SspoQ8CG65 4998 aa2.45□□□□□ -2.02
Cux1-204ENSMUST00000175975 4932415D10RikA0A1W2P6U8 4986 aa2.44□□□□□ -2.02
Cux1-204ENSMUST00000175975 1110025L11RikO09048 78 aa2.42□□□□□ -2.02
Cux1-204ENSMUST00000175975 Krtap6-5Q925H3 78 aa2.42□□□□□ -2.02
Cux1-204ENSMUST00000175975 Hmcn2A2AJ76 5100 aa2.42□□□□□ -2.02
Cux1-204ENSMUST00000175975 Gm11555B1AQ89 175 aa2.39□□□□□ -2.03
Cux1-204ENSMUST00000175975 Gm10229O08631 77 aa2.37□□□□□ -2.03
Cux1-204ENSMUST00000175975 Abca13Q5SSE9 5034 aa2.33□□□□□ -2.04
Cux1-204ENSMUST00000175975 Fat4Q2PZL6 4981 aa2.27□□□□□ -2.05
Cux1-204ENSMUST00000175975 Rnf213E9Q555 5152 aaKnown RBP2.26□□□□□ -2.05
Cux1-204ENSMUST00000175975 Eppk1Q8R0W0 6548 aa2.26□□□□□ -2.05
Cux1-204ENSMUST00000175975 Kmt2dQ6PDK2 5588 aa2.23□□□□□ -2.05
Cux1-204ENSMUST00000175975 Phgr1Q8K0G7 91 aa2.22□□□□□ -2.05
Cux1-204ENSMUST00000175975 Ush2AQ2QI47 5193 aa2.13□□□□□ -2.07
Cux1-204ENSMUST00000175975 Macf1Q9QXZ0 7354 aaKnown RBP2.08□□□□□ -2.08
Cux1-204ENSMUST00000175975 Muc16A0A140LJ72 8478 aa2.04□□□□□ -2.08
Cux1-204ENSMUST00000175975 NebE9Q1W3 7152 aa2.01□□□□□ -2.09
Cux1-204ENSMUST00000175975 DstQ91ZU6 7393 aaKnown RBP2.01□□□□□ -2.09
Cux1-204ENSMUST00000175975 Gm11559Q9D3H7 191 aa1.94□□□□□ -2.1
Cux1-204ENSMUST00000175975 Muc19Q6PZE0 7524 aa1.94□□□□□ -2.1
Cux1-204ENSMUST00000175975 Gm11568A2A4M2 211 aa1.91□□□□□ -2.1
Cux1-204ENSMUST00000175975 Krtap9-1Q64526 186 aa1.91□□□□□ -2.1
Cux1-204ENSMUST00000175975 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Cux1-204ENSMUST00000175975 Krtap6-2O08884 159 aa1.83□□□□□ -2.12
Cux1-204ENSMUST00000175975 Gpr98Q8VHN7 6298 aaKnown RBP1.72□□□□□ -2.13
Cux1-204ENSMUST00000175975 Hmcn1D3YXG0 5634 aa1.64□□□□□ -2.15
Cux1-204ENSMUST00000175975 A0A1Y7VLE6 161 aa1.63□□□□□ -2.15
Cux1-204ENSMUST00000175975 Krtap21-1Q925H4 128 aa1.6□□□□□ -2.15
Cux1-204ENSMUST00000175975 Krtap5-2Q9D5Z7 189 aa1.6□□□□□ -2.15
Cux1-204ENSMUST00000175975 Gm11639A0A1D5RLM8 5808 aa1.6□□□□□ -2.15
Cux1-204ENSMUST00000175975 Gm4553A0A1B0GSA9 284 aa1.51□□□□□ -2.17
Cux1-204ENSMUST00000175975 A030003K21RikA0A1Y7VIM3 128 aa1.5□□□□□ -2.17
Cux1-204ENSMUST00000175975 A030005L19RikA0A1Y7VIU2 113 aa1.45□□□□□ -2.18
Cux1-204ENSMUST00000175975 Gm6217A0A1Y7VJK9 128 aa1.4□□□□□ -2.19
Cux1-204ENSMUST00000175975 A0A1Y7VJH8 109 aa1.38□□□□□ -2.19
Cux1-204ENSMUST00000175975 Krtap28-10A0A1Y7VP58 119 aa1.35□□□□□ -2.19
Cux1-204ENSMUST00000175975 Gm2431E9Q8S1 172 aa1.35□□□□□ -2.19
Cux1-204ENSMUST00000175975 A030005K14RikA0A1Y7VNY1 122 aa1.32□□□□□ -2.2
Cux1-204ENSMUST00000175975 AhnakE9Q616 5656 aaKnown RBP1.32□□□□□ -2.2
Cux1-204ENSMUST00000175975 Krtap28-13A0A087WQP5 138 aa1.3□□□□□ -2.2
Cux1-204ENSMUST00000175975 Gm7544A0A1Y7VJ58 118 aa1.28□□□□□ -2.2
Cux1-204ENSMUST00000175975 A0A1Y7VJ07 166 aa1.28□□□□□ -2.2
Cux1-204ENSMUST00000175975 A030014E15RikA0A1Y7VJV2 120 aa1.26□□□□□ -2.21
Cux1-204ENSMUST00000175975 Gm10153A0A1B0GRL1 320 aa1.23□□□□□ -2.21
Cux1-204ENSMUST00000175975 Gm39115A0A1B0GSH7 232 aa1.21□□□□□ -2.22
Cux1-204ENSMUST00000175975 Gm45337A0A1B0GS71 263 aa1.2□□□□□ -2.22
Cux1-204ENSMUST00000175975 Gm40460A0A1B0GR10 244 aa1.17□□□□□ -2.22
Cux1-204ENSMUST00000175975 Gm7579A0A1B0GRJ4 243 aa1.17□□□□□ -2.22
Cux1-204ENSMUST00000175975 Krtap5-5Q2TA51 241 aa1.17□□□□□ -2.22
Cux1-204ENSMUST00000175975 Krtap5-4Q62220 223 aa1.17□□□□□ -2.22
Cux1-204ENSMUST00000175975 Gm45618A0A1B0GSA0 219 aa1.02□□□□□ -2.25
Cux1-204ENSMUST00000175975 A0A286YCP9 139 aa0.98□□□□□ -2.25
Cux1-204ENSMUST00000175975 Gm29735A0A1B0GT06 219 aa0.95□□□□□ -2.26
Cux1-204ENSMUST00000175975 Krtap5-1Q64507 230 aa0.86□□□□□ -2.27
Cux1-204ENSMUST00000175975 Gm4559A4IF42 199 aa0.53□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 455.3 ms