RNA–Protein interactions for RNA: ENSMUST00000168910.1

Ccr9-204, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 2,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-204ENSMUST00000168910 Krtap16-3Q8C1I6 86 aa2.58□□□□□ -2
Ccr9-204ENSMUST00000168910 Krtap1-3A2A588 173 aa2.56□□□□□ -2
Ccr9-204ENSMUST00000168910 Krtap13-1Q8K198 168 aa2.56□□□□□ -2
Ccr9-204ENSMUST00000168910 Gm10382Q3V0T5 144 aa2.56□□□□□ -2
Ccr9-204ENSMUST00000168910 Rnf213E9Q555 5152 aaKnown RBP2.55□□□□□ -2
Ccr9-204ENSMUST00000168910 Gm11639A0A1D5RLM8 5808 aa2.55□□□□□ -2
Ccr9-204ENSMUST00000168910 Cox6b2Q80ZN9 88 aa2.55□□□□□ -2
Ccr9-204ENSMUST00000168910 Krtap19-3Q925H6 87 aa2.55□□□□□ -2
Ccr9-204ENSMUST00000168910 Gm11562A0PK51 136 aa2.54□□□□□ -2
Ccr9-204ENSMUST00000168910 Camk2n1Q6QWF9 78 aa2.54□□□□□ -2
Ccr9-204ENSMUST00000168910 Krtap19-1Q925H2 87 aa2.54□□□□□ -2
Ccr9-204ENSMUST00000168910 Gm17416Q30KP4 66 aa2.52□□□□□ -2.01
Ccr9-204ENSMUST00000168910 Gm9789Q8BIG3 52 aa2.52□□□□□ -2.01
Ccr9-204ENSMUST00000168910 Gm20537G3UYK7 97 aa2.51□□□□□ -2.01
Ccr9-204ENSMUST00000168910 Gm7735D3YX18 52 aa2.5□□□□□ -2.01
Ccr9-204ENSMUST00000168910 B930094E09RikQ8C4T2 136 aa2.49□□□□□ -2.01
Ccr9-204ENSMUST00000168910 Gm17606F6ZL36 78 aa2.47□□□□□ -2.01
Ccr9-204ENSMUST00000168910 Prm1P02319 51 aa2.47□□□□□ -2.01
Ccr9-204ENSMUST00000168910 DstQ91ZU6 7393 aaKnown RBP2.44□□□□□ -2.02
Ccr9-204ENSMUST00000168910 BC029722A0A0N4SW31 51 aa2.38□□□□□ -2.03
Ccr9-204ENSMUST00000168910 Krtap6-5Q925H3 78 aa2.38□□□□□ -2.03
Ccr9-204ENSMUST00000168910 Gm19426M0QWC7 77 aa2.36□□□□□ -2.03
Ccr9-204ENSMUST00000168910 Spink7Q6IE32 76 aa2.36□□□□□ -2.03
Ccr9-204ENSMUST00000168910 Gm9955Q8CEJ8 102 aa2.36□□□□□ -2.03
Ccr9-204ENSMUST00000168910 Krtap7-1Q9D3I6 87 aa2.36□□□□□ -2.03
Ccr9-204ENSMUST00000168910 Krtap1-4Q3V2D6 188 aa2.35□□□□□ -2.03
Ccr9-204ENSMUST00000168910 SspoQ8CG65 4998 aa2.33□□□□□ -2.04
Ccr9-204ENSMUST00000168910 Gm40193A0A1B0GT39 78 aa2.3□□□□□ -2.04
Ccr9-204ENSMUST00000168910 Gm10061D3Z714 54 aa2.29□□□□□ -2.04
Ccr9-204ENSMUST00000168910 Mdn1A2ANY6 5589 aaKnown RBP2.27□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Krtap19-2Q925I0 141 aa2.26□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Sprr2a3Q4KL71 83 aa2.24□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Sprr2a1Q9CQK8 83 aa2.24□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Krtap19-9aF8WH65 55 aa2.23□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Lce3dE9Q8V1 98 aa2.22□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Lce3aQ497I5 98 aa2.22□□□□□ -2.05
Ccr9-204ENSMUST00000168910 Muc5bE9Q5I3 4800 aa2.21□□□□□ -2.06
Ccr9-204ENSMUST00000168910 Gm6358A0A087WPH4 74 aa2.15□□□□□ -2.07
Ccr9-204ENSMUST00000168910 Gm17402F6Z0L5 76 aa2.15□□□□□ -2.07
Ccr9-204ENSMUST00000168910 Mt2P02798 61 aa2.09□□□□□ -2.07
Ccr9-204ENSMUST00000168910 Fsip2A2ARZ3 6995 aa2.08□□□□□ -2.08
Ccr9-204ENSMUST00000168910 Syne2Q6ZWQ0 6874 aaKnown RBP2.05□□□□□ -2.08
Ccr9-204ENSMUST00000168910 Lce3fQ6PAI4 98 aa2□□□□□ -2.09
Ccr9-204ENSMUST00000168910 Lce3cQ91V05 98 aa2□□□□□ -2.09
Ccr9-204ENSMUST00000168910 Krtap19-9bQ99NG9 58 aa2□□□□□ -2.09
Ccr9-204ENSMUST00000168910 Krtap8-1O08633 61 aa1.99□□□□□ -2.09
Ccr9-204ENSMUST00000168910 Krtap22-2J3QNX6 67 aa1.94□□□□□ -2.1
Ccr9-204ENSMUST00000168910 Mt4P47945 62 aa1.92□□□□□ -2.1
Ccr9-204ENSMUST00000168910 Krtap6-2O08884 159 aa1.9□□□□□ -2.1
Ccr9-204ENSMUST00000168910 Tnp1P10856 55 aa1.89□□□□□ -2.11
Ccr9-204ENSMUST00000168910 Syne1Q6ZWR6 8799 aa1.88□□□□□ -2.11
Ccr9-204ENSMUST00000168910 Gm10229O08631 77 aa1.86□□□□□ -2.11
Ccr9-204ENSMUST00000168910 Gm11938Q9D3H4 131 aa1.85□□□□□ -2.11
Ccr9-204ENSMUST00000168910 Sprr2kO70562 68 aa1.79□□□□□ -2.12
Ccr9-204ENSMUST00000168910 2310046K23RikA0A0A6YVW6 87 aa1.77□□□□□ -2.13
Ccr9-204ENSMUST00000168910 4933428G20RikQ9D3X4 101 aa1.73□□□□□ -2.13
Ccr9-204ENSMUST00000168910 Lce3bQ9CQM7 98 aa1.71□□□□□ -2.14
Ccr9-204ENSMUST00000168910 Macf1Q9QXZ0 7354 aaKnown RBP1.7□□□□□ -2.14
Ccr9-204ENSMUST00000168910 Krtap20-2E9Q0A8 60 aa1.66□□□□□ -2.14
Ccr9-204ENSMUST00000168910 Krtap4-16Q91W93 202 aa1.65□□□□□ -2.14
Ccr9-204ENSMUST00000168910 Sprr2iO70560 76 aa1.64□□□□□ -2.15
Ccr9-204ENSMUST00000168910 Krtap6-3A0A087WQL6 57 aa1.63□□□□□ -2.15
Ccr9-204ENSMUST00000168910 ObscnA2AAJ9 8891 aaKnown RBP1.63□□□□□ -2.15
Ccr9-204ENSMUST00000168910 Lce3eF8VQJ0 98 aa1.62□□□□□ -2.15
Ccr9-204ENSMUST00000168910 Muc16A0A140LJ72 8478 aa1.61□□□□□ -2.15
Ccr9-204ENSMUST00000168910 Sprr2gO70558 76 aa1.6□□□□□ -2.15
Ccr9-204ENSMUST00000168910 AhnakE9Q616 5656 aaKnown RBP1.59□□□□□ -2.16
Ccr9-204ENSMUST00000168910 Sprr2dO70555 85 aa1.58□□□□□ -2.16
Ccr9-204ENSMUST00000168910 Sprr2fO70557 76 aa1.54□□□□□ -2.16
Ccr9-204ENSMUST00000168910 Mt1P02802 61 aaKnown RBP1.54□□□□□ -2.16
Ccr9-204ENSMUST00000168910 Krtap19-4Q925H7 84 aa1.52□□□□□ -2.17
Ccr9-204ENSMUST00000168910 Gm10024A0A0A0MQA4 119 aa1.5□□□□□ -2.17
Ccr9-204ENSMUST00000168910 Muc19Q6PZE0 7524 aa1.43□□□□□ -2.18
Ccr9-204ENSMUST00000168910 Sprr2hO70559 108 aa1.42□□□□□ -2.18
Ccr9-204ENSMUST00000168910 Sprr2eO70556 76 aa1.41□□□□□ -2.18
Ccr9-204ENSMUST00000168910 NebE9Q1W3 7152 aa1.37□□□□□ -2.19
Ccr9-204ENSMUST00000168910 Krtap21-1Q925H4 128 aa1.22□□□□□ -2.21
Ccr9-204ENSMUST00000168910 1110025L11RikO09048 78 aa1.21□□□□□ -2.22
Ccr9-204ENSMUST00000168910 Sprr2bO70554 98 aa0.9□□□□□ -2.27
Ccr9-204ENSMUST00000168910 Phgr1Q8K0G7 91 aa0.84□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 161 ms