RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Mt3P28184 68 aa3.28□□□□□ -1.88
Col6a4-201ENSMUST00000121963 Herc2Q4U2R1 4836 aa3.28□□□□□ -1.88
Col6a4-201ENSMUST00000121963 Krtap6-3A0A087WQL6 57 aa3.26□□□□□ -1.89
Col6a4-201ENSMUST00000121963 Krtap31-2Q8CAY5 177 aa3.25□□□□□ -1.89
Col6a4-201ENSMUST00000121963 Ryr3A2AGL3 4863 aa3.25□□□□□ -1.89
Col6a4-201ENSMUST00000121963 Gm11554B1AQB2 190 aa3.21□□□□□ -1.9
Col6a4-201ENSMUST00000121963 Kmt2cQ8BRH4 4903 aa3.16□□□□□ -1.9
Col6a4-201ENSMUST00000121963 HydinQ80W93 5154 aa3.12□□□□□ -1.91
Col6a4-201ENSMUST00000121963 Ryr2E9Q401 4966 aaKnown RBP3.11□□□□□ -1.91
Col6a4-201ENSMUST00000121963 Kiaa1109A2AAE1 5005 aa3.1□□□□□ -1.91
Col6a4-201ENSMUST00000121963 Syne1Q6ZWR6 8799 aa3.1□□□□□ -1.91
Col6a4-201ENSMUST00000121963 PcloQ9QYX7 5068 aa3.07□□□□□ -1.92
Col6a4-201ENSMUST00000121963 Herc1E9PZP8 4859 aa3.06□□□□□ -1.92
Col6a4-201ENSMUST00000121963 Krtap31-1Q9D644 177 aa3.05□□□□□ -1.92
Col6a4-201ENSMUST00000121963 Syne2Q6ZWQ0 6874 aaKnown RBP3.03□□□□□ -1.92
Col6a4-201ENSMUST00000121963 Krtap4-16Q91W93 202 aa2.99□□□□□ -1.93
Col6a4-201ENSMUST00000121963 Fsip2A2ARZ3 6995 aa2.98□□□□□ -1.93
Col6a4-201ENSMUST00000121963 Mdn1A2ANY6 5589 aaKnown RBP2.93□□□□□ -1.94
Col6a4-201ENSMUST00000121963 Birc6O88738 4882 aa2.91□□□□□ -1.94
Col6a4-201ENSMUST00000121963 Krtap20-2E9Q0A8 60 aa2.88□□□□□ -1.95
Col6a4-201ENSMUST00000121963 Muc5bE9Q5I3 4800 aa2.87□□□□□ -1.95
Col6a4-201ENSMUST00000121963 4932415D10RikA0A1W2P6U8 4986 aa2.86□□□□□ -1.95
Col6a4-201ENSMUST00000121963 ZanO88799 5376 aa2.83□□□□□ -1.96
Col6a4-201ENSMUST00000121963 Mt1P02802 61 aaKnown RBP2.76□□□□□ -1.97
Col6a4-201ENSMUST00000121963 Ubr4A2AN08 5180 aa2.71□□□□□ -1.98
Col6a4-201ENSMUST00000121963 Fat4Q2PZL6 4981 aa2.71□□□□□ -1.98
Col6a4-201ENSMUST00000121963 Abca13Q5SSE9 5034 aa2.7□□□□□ -1.98
Col6a4-201ENSMUST00000121963 ObscnA2AAJ9 8891 aaKnown RBP2.7□□□□□ -1.98
Col6a4-201ENSMUST00000121963 Hmcn2A2AJ76 5100 aa2.69□□□□□ -1.98
Col6a4-201ENSMUST00000121963 Gm11555B1AQ89 175 aa2.64□□□□□ -1.99
Col6a4-201ENSMUST00000121963 Muc16A0A140LJ72 8478 aa2.63□□□□□ -1.99
Col6a4-201ENSMUST00000121963 Ush2AQ2QI47 5193 aa2.53□□□□□ -2
Col6a4-201ENSMUST00000121963 Rnf213E9Q555 5152 aaKnown RBP2.52□□□□□ -2.01
Col6a4-201ENSMUST00000121963 Eppk1Q8R0W0 6548 aa2.43□□□□□ -2.02
Col6a4-201ENSMUST00000121963 Macf1Q9QXZ0 7354 aaKnown RBP2.41□□□□□ -2.02
Col6a4-201ENSMUST00000121963 SspoQ8CG65 4998 aa2.39□□□□□ -2.03
Col6a4-201ENSMUST00000121963 Gm11559Q9D3H7 191 aa2.29□□□□□ -2.04
Col6a4-201ENSMUST00000121963 NebE9Q1W3 7152 aa2.28□□□□□ -2.04
Col6a4-201ENSMUST00000121963 1110025L11RikO09048 78 aa2.26□□□□□ -2.05
Col6a4-201ENSMUST00000121963 Krtap6-5Q925H3 78 aa2.26□□□□□ -2.05
Col6a4-201ENSMUST00000121963 Gm10229O08631 77 aa2.25□□□□□ -2.05
Col6a4-201ENSMUST00000121963 Muc19Q6PZE0 7524 aa2.21□□□□□ -2.05
Col6a4-201ENSMUST00000121963 DstQ91ZU6 7393 aaKnown RBP2.2□□□□□ -2.06
Col6a4-201ENSMUST00000121963 Phgr1Q8K0G7 91 aa2.19□□□□□ -2.06
Col6a4-201ENSMUST00000121963 Gm11568A2A4M2 211 aa2.05□□□□□ -2.08
Col6a4-201ENSMUST00000121963 Krtap9-1Q64526 186 aa2.05□□□□□ -2.08
Col6a4-201ENSMUST00000121963 Kmt2dQ6PDK2 5588 aa1.98□□□□□ -2.09
Col6a4-201ENSMUST00000121963 Krtap6-2O08884 159 aa1.76□□□□□ -2.13
Col6a4-201ENSMUST00000121963 Krtap5-2Q9D5Z7 189 aa1.69□□□□□ -2.14
Col6a4-201ENSMUST00000121963 Gm11567Q9D141 195 aa1.69□□□□□ -2.14
Col6a4-201ENSMUST00000121963 Gpr98Q8VHN7 6298 aaKnown RBP1.66□□□□□ -2.14
Col6a4-201ENSMUST00000121963 Gm4553A0A1B0GSA9 284 aa1.63□□□□□ -2.15
Col6a4-201ENSMUST00000121963 Gm11639A0A1D5RLM8 5808 aa1.63□□□□□ -2.15
Col6a4-201ENSMUST00000121963 A030005L19RikA0A1Y7VIU2 113 aa1.59□□□□□ -2.16
Col6a4-201ENSMUST00000121963 Gm2431E9Q8S1 172 aa1.55□□□□□ -2.16
Col6a4-201ENSMUST00000121963 Krtap21-1Q925H4 128 aa1.5□□□□□ -2.17
Col6a4-201ENSMUST00000121963 Hmcn1D3YXG0 5634 aa1.48□□□□□ -2.17
Col6a4-201ENSMUST00000121963 AhnakE9Q616 5656 aaKnown RBP1.31□□□□□ -2.2
Col6a4-201ENSMUST00000121963 Gm10153A0A1B0GRL1 320 aa1.28□□□□□ -2.2
Col6a4-201ENSMUST00000121963 Gm45337A0A1B0GS71 263 aa1.26□□□□□ -2.21
Col6a4-201ENSMUST00000121963 Gm39115A0A1B0GSH7 232 aa1.24□□□□□ -2.21
Col6a4-201ENSMUST00000121963 Gm7579A0A1B0GRJ4 243 aa1.23□□□□□ -2.21
Col6a4-201ENSMUST00000121963 Gm40460A0A1B0GR10 244 aa1.21□□□□□ -2.22
Col6a4-201ENSMUST00000121963 Krtap5-5Q2TA51 241 aa1.21□□□□□ -2.22
Col6a4-201ENSMUST00000121963 Krtap5-4Q62220 223 aa1.21□□□□□ -2.22
Col6a4-201ENSMUST00000121963 Krtap5-1Q64507 230 aa1.08□□□□□ -2.24
Col6a4-201ENSMUST00000121963 A0A1Y7VJH8 109 aa1.07□□□□□ -2.24
Col6a4-201ENSMUST00000121963 Gm45618A0A1B0GSA0 219 aa1.02□□□□□ -2.25
Col6a4-201ENSMUST00000121963 A0A286YCP9 139 aa0.89□□□□□ -2.27
Col6a4-201ENSMUST00000121963 Gm29735A0A1B0GT06 219 aa0.89□□□□□ -2.27
Col6a4-201ENSMUST00000121963 A0A1Y7VLE6 161 aa0.88□□□□□ -2.27
Col6a4-201ENSMUST00000121963 Krtap28-10A0A1Y7VP58 119 aa0.87□□□□□ -2.27
Col6a4-201ENSMUST00000121963 A030014E15RikA0A1Y7VJV2 120 aa0.86□□□□□ -2.27
Col6a4-201ENSMUST00000121963 A0A1Y7VJ07 166 aa0.76□□□□□ -2.29
Col6a4-201ENSMUST00000121963 A030003K21RikA0A1Y7VIM3 128 aa0.75□□□□□ -2.29
Col6a4-201ENSMUST00000121963 Krtap28-13A0A087WQP5 138 aa0.75□□□□□ -2.29
Col6a4-201ENSMUST00000121963 Gm6217A0A1Y7VJK9 128 aa0.75□□□□□ -2.29
Col6a4-201ENSMUST00000121963 A030005K14RikA0A1Y7VNY1 122 aa0.74□□□□□ -2.29
Col6a4-201ENSMUST00000121963 Gm7544A0A1Y7VJ58 118 aa0.72□□□□□ -2.29
Col6a4-201ENSMUST00000121963 Gm4559A4IF42 199 aa0.56□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 468.3 ms