RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Krtap9-3Q3V2C1 136 aa2.25□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Gm11564A2A4L9 201 aa2.24□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Gm11595B1AQA7 289 aa2.24□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Krtap4-8B1AQA8 209 aa2.24□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Sprr2fO70557 76 aa2.23□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Mt4P47945 62 aa2.22□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Syne2Q6ZWQ0 6874 aaKnown RBP2.22□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Fat4Q2PZL6 4981 aa2.22□□□□□ -2.05
Ube4a-201ENSMUST00000117506 Krtap19-4Q925H7 84 aa2.21□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Ubr4A2AN08 5180 aa2.2□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Krtap6-3A0A087WQL6 57 aa2.19□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Rnf213E9Q555 5152 aaKnown RBP2.19□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Gm11555B1AQ89 175 aa2.18□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Sprr2eO70556 76 aa2.17□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Lce1iQ9D6P5 149 aa2.17□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Ush2AQ2QI47 5193 aa2.17□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Krtap4-9B1AQA9 244 aa2.16□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Lce1lQ9D1G7 135 aa2.16□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Muc5bE9Q5I3 4800 aa2.16□□□□□ -2.06
Ube4a-201ENSMUST00000117506 Lce1hQ9D6R3 140 aa2.15□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Lce1a2Q9D1K4 149 aa2.13□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Hmcn2A2AJ76 5100 aa2.11□□□□□ -2.07
Ube4a-201ENSMUST00000117506 SspoQ8CG65 4998 aa2.11□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Lce1fB9EJP6 147 aa2.11□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Lce1cQ9D1C5 147 aa2.11□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Lce1dQ9D731 133 aa2.11□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Lce1eQ9D139 143 aa2.1□□□□□ -2.07
Ube4a-201ENSMUST00000117506 Krtap4-13Q9D7P3 165 aa2.08□□□□□ -2.08
Ube4a-201ENSMUST00000117506 2300003K06RikA2A4M0 262 aa2.07□□□□□ -2.08
Ube4a-201ENSMUST00000117506 Lce1bQ9D149 137 aa2.05□□□□□ -2.08
Ube4a-201ENSMUST00000117506 Sprr2hO70559 108 aa2.05□□□□□ -2.08
Ube4a-201ENSMUST00000117506 Lce1a1Q9CQH5 143 aa2.01□□□□□ -2.09
Ube4a-201ENSMUST00000117506 Eppk1Q8R0W0 6548 aa2□□□□□ -2.09
Ube4a-201ENSMUST00000117506 Mt3P28184 68 aa2□□□□□ -2.09
Ube4a-201ENSMUST00000117506 Sprr2dO70555 85 aa1.97□□□□□ -2.09
Ube4a-201ENSMUST00000117506 Krtap20-2E9Q0A8 60 aa1.95□□□□□ -2.1
Ube4a-201ENSMUST00000117506 Gm11938Q9D3H4 131 aa1.95□□□□□ -2.1
Ube4a-201ENSMUST00000117506 Mdn1A2ANY6 5589 aaKnown RBP1.9□□□□□ -2.1
Ube4a-201ENSMUST00000117506 Lce1kJ3QP15 125 aa1.83□□□□□ -2.12
Ube4a-201ENSMUST00000117506 Sprr2bO70554 98 aa1.79□□□□□ -2.12
Ube4a-201ENSMUST00000117506 Gm11554B1AQB2 190 aa1.79□□□□□ -2.12
Ube4a-201ENSMUST00000117506 Fsip2A2ARZ3 6995 aa1.77□□□□□ -2.13
Ube4a-201ENSMUST00000117506 Gm45618A0A1B0GSA0 219 aa1.77□□□□□ -2.13
Ube4a-201ENSMUST00000117506 Gm39115A0A1B0GSH7 232 aa1.75□□□□□ -2.13
Ube4a-201ENSMUST00000117506 Gm45337A0A1B0GS71 263 aa1.73□□□□□ -2.13
Ube4a-201ENSMUST00000117506 Mt1P02802 61 aaKnown RBP1.72□□□□□ -2.13
Ube4a-201ENSMUST00000117506 Krtap4-16Q91W93 202 aa1.7□□□□□ -2.14
Ube4a-201ENSMUST00000117506 Gm11559Q9D3H7 191 aa1.67□□□□□ -2.14
Ube4a-201ENSMUST00000117506 Gm2431E9Q8S1 172 aa1.56□□□□□ -2.16
Ube4a-201ENSMUST00000117506 Krtap5-2Q9D5Z7 189 aa1.54□□□□□ -2.16
Ube4a-201ENSMUST00000117506 Gpr98Q8VHN7 6298 aaKnown RBP1.52□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Syne1Q6ZWR6 8799 aa1.52□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Gm29735A0A1B0GT06 219 aa1.52□□□□□ -2.17
Ube4a-201ENSMUST00000117506 ObscnA2AAJ9 8891 aaKnown RBP1.5□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Kmt2dQ6PDK2 5588 aa1.5□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Gm4553A0A1B0GSA9 284 aa1.49□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Gm11568A2A4M2 211 aa1.49□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Krtap9-1Q64526 186 aa1.49□□□□□ -2.17
Ube4a-201ENSMUST00000117506 Gm11639A0A1D5RLM8 5808 aa1.46□□□□□ -2.18
Ube4a-201ENSMUST00000117506 Gm10153A0A1B0GRL1 320 aa1.46□□□□□ -2.18
Ube4a-201ENSMUST00000117506 DstQ91ZU6 7393 aaKnown RBP1.38□□□□□ -2.19
Ube4a-201ENSMUST00000117506 1110025L11RikO09048 78 aa1.37□□□□□ -2.19
Ube4a-201ENSMUST00000117506 Krtap6-5Q925H3 78 aa1.37□□□□□ -2.19
Ube4a-201ENSMUST00000117506 Muc16A0A140LJ72 8478 aa1.37□□□□□ -2.19
Ube4a-201ENSMUST00000117506 Krtap5-1Q64507 230 aa1.35□□□□□ -2.19
Ube4a-201ENSMUST00000117506 Hmcn1D3YXG0 5634 aa1.35□□□□□ -2.19
Ube4a-201ENSMUST00000117506 Gm40460A0A1B0GR10 244 aa1.33□□□□□ -2.2
Ube4a-201ENSMUST00000117506 Gm7579A0A1B0GRJ4 243 aa1.33□□□□□ -2.2
Ube4a-201ENSMUST00000117506 Krtap5-5Q2TA51 241 aa1.33□□□□□ -2.2
Ube4a-201ENSMUST00000117506 Krtap5-4Q62220 223 aa1.33□□□□□ -2.2
Ube4a-201ENSMUST00000117506 Gm10229O08631 77 aa1.29□□□□□ -2.2
Ube4a-201ENSMUST00000117506 Macf1Q9QXZ0 7354 aaKnown RBP1.29□□□□□ -2.2
Ube4a-201ENSMUST00000117506 NebE9Q1W3 7152 aa1.26□□□□□ -2.21
Ube4a-201ENSMUST00000117506 Phgr1Q8K0G7 91 aa1.24□□□□□ -2.21
Ube4a-201ENSMUST00000117506 AhnakE9Q616 5656 aaKnown RBP1.2□□□□□ -2.22
Ube4a-201ENSMUST00000117506 Gm11567Q9D141 195 aa1.13□□□□□ -2.23
Ube4a-201ENSMUST00000117506 Muc19Q6PZE0 7524 aa1.05□□□□□ -2.24
Ube4a-201ENSMUST00000117506 Krtap21-1Q925H4 128 aa1.04□□□□□ -2.24
Ube4a-201ENSMUST00000117506 Krtap6-2O08884 159 aa1.04□□□□□ -2.24
Ube4a-201ENSMUST00000117506 Gm4559A4IF42 199 aa0.99□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 6.6 ms