RNA–Protein interactions for RNA: ENSMUST00000109111.1

Clk4-202, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 2 BASIC

Gene Clk4, Length 1,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-202ENSMUST00000109111 Brk1Q91VR8 75 aa2.49□□□□□ -2.01
Clk4-202ENSMUST00000109111 Gm20661K7N787 53 aa2.48□□□□□ -2.01
Clk4-202ENSMUST00000109111 Rps28P62858 69 aaKnown RBP2.48□□□□□ -2.01
Clk4-202ENSMUST00000109111 Gm10061D3Z714 54 aa2.47□□□□□ -2.01
Clk4-202ENSMUST00000109111 Krtap13-1Q8K198 168 aa2.47□□□□□ -2.01
Clk4-202ENSMUST00000109111 Mp68P56379 58 aa2.46□□□□□ -2.02
Clk4-202ENSMUST00000109111 Phxr4P15974 95 aa2.45□□□□□ -2.02
Clk4-202ENSMUST00000109111 SspoQ8CG65 4998 aa2.45□□□□□ -2.02
Clk4-202ENSMUST00000109111 Cox6b2Q80ZN9 88 aa2.44□□□□□ -2.02
Clk4-202ENSMUST00000109111 Krtap1-4Q3V2D6 188 aa2.43□□□□□ -2.02
Clk4-202ENSMUST00000109111 SptssbQ925E8 76 aa2.41□□□□□ -2.02
Clk4-202ENSMUST00000109111 Pla2g10Q9QXX3 151 aa2.39□□□□□ -2.03
Clk4-202ENSMUST00000109111 Gm10382Q3V0T5 144 aa2.38□□□□□ -2.03
Clk4-202ENSMUST00000109111 Limd2Q8BGB5 128 aa2.38□□□□□ -2.03
Clk4-202ENSMUST00000109111 Krtap4-16Q91W93 202 aa2.37□□□□□ -2.03
Clk4-202ENSMUST00000109111 Uqcr11Q9CPX8 56 aa2.37□□□□□ -2.03
Clk4-202ENSMUST00000109111 Gm17606F6ZL36 78 aa2.36□□□□□ -2.03
Clk4-202ENSMUST00000109111 Ndufaf8A2AMZ4 74 aa2.35□□□□□ -2.03
Clk4-202ENSMUST00000109111 Gm19426M0QWC7 77 aa2.35□□□□□ -2.03
Clk4-202ENSMUST00000109111 Hmcn1D3YXG0 5634 aa2.34□□□□□ -2.03
Clk4-202ENSMUST00000109111 Ndufb1P0DN34 57 aa2.34□□□□□ -2.04
Clk4-202ENSMUST00000109111 Gm9112A2AI92 75 aa2.32□□□□□ -2.04
Clk4-202ENSMUST00000109111 4933415A04RikQ9D443 101 aa2.31□□□□□ -2.04
Clk4-202ENSMUST00000109111 BC029722A0A0N4SW31 51 aa2.3□□□□□ -2.04
Clk4-202ENSMUST00000109111 Gm20537G3UYK7 97 aa2.3□□□□□ -2.04
Clk4-202ENSMUST00000109111 Gm12216A0A1W2P827 62 aa2.29□□□□□ -2.04
Clk4-202ENSMUST00000109111 Muc5bE9Q5I3 4800 aa2.28□□□□□ -2.04
Clk4-202ENSMUST00000109111 Spink7Q6IE32 76 aa2.26□□□□□ -2.05
Clk4-202ENSMUST00000109111 Mdn1A2ANY6 5589 aaKnown RBP2.26□□□□□ -2.05
Clk4-202ENSMUST00000109111 Gm9955Q8CEJ8 102 aa2.25□□□□□ -2.05
Clk4-202ENSMUST00000109111 Krtap19-2Q925I0 141 aa2.25□□□□□ -2.05
Clk4-202ENSMUST00000109111 Krtap19-9aF8WH65 55 aa2.21□□□□□ -2.06
Clk4-202ENSMUST00000109111 CriptO70333 101 aa2.21□□□□□ -2.06
Clk4-202ENSMUST00000109111 Syne2Q6ZWQ0 6874 aaKnown RBP2.2□□□□□ -2.06
Clk4-202ENSMUST00000109111 Sprr2a3Q4KL71 83 aa2.19□□□□□ -2.06
Clk4-202ENSMUST00000109111 Ndufs5Q99LY9 106 aa2.19□□□□□ -2.06
Clk4-202ENSMUST00000109111 Sprr2a1Q9CQK8 83 aa2.19□□□□□ -2.06
Clk4-202ENSMUST00000109111 Gm17402F6Z0L5 76 aa2.18□□□□□ -2.06
Clk4-202ENSMUST00000109111 Gm3880A0A1B0GSB3 72 aa2.17□□□□□ -2.06
Clk4-202ENSMUST00000109111 Gm6358A0A087WPH4 74 aa2.16□□□□□ -2.06
Clk4-202ENSMUST00000109111 4933428G20RikQ9D3X4 101 aa2.13□□□□□ -2.07
Clk4-202ENSMUST00000109111 Gm40193A0A1B0GT39 78 aa2.08□□□□□ -2.08
Clk4-202ENSMUST00000109111 Krtap8-1O08633 61 aa2.06□□□□□ -2.08
Clk4-202ENSMUST00000109111 Mt2P02798 61 aa2.06□□□□□ -2.08
Clk4-202ENSMUST00000109111 Mt4P47945 62 aa2.05□□□□□ -2.08
Clk4-202ENSMUST00000109111 Romo1P60603 79 aa2.04□□□□□ -2.08
Clk4-202ENSMUST00000109111 Fsip2A2ARZ3 6995 aa1.98□□□□□ -2.09
Clk4-202ENSMUST00000109111 Sprr2kO70562 68 aa1.97□□□□□ -2.09
Clk4-202ENSMUST00000109111 Krtap6-3A0A087WQL6 57 aa1.96□□□□□ -2.1
Clk4-202ENSMUST00000109111 Krtap22-2J3QNX6 67 aa1.96□□□□□ -2.1
Clk4-202ENSMUST00000109111 Krtap19-9bQ99NG9 58 aa1.96□□□□□ -2.1
Clk4-202ENSMUST00000109111 Krtap21-1Q925H4 128 aa1.95□□□□□ -2.1
Clk4-202ENSMUST00000109111 1110025L11RikO09048 78 aa1.91□□□□□ -2.1
Clk4-202ENSMUST00000109111 Sprr2gO70558 76 aa1.86□□□□□ -2.11
Clk4-202ENSMUST00000109111 Syne1Q6ZWR6 8799 aa1.82□□□□□ -2.12
Clk4-202ENSMUST00000109111 Tnp1P10856 55 aa1.79□□□□□ -2.12
Clk4-202ENSMUST00000109111 2310046K23RikA0A0A6YVW6 87 aa1.78□□□□□ -2.12
Clk4-202ENSMUST00000109111 Krtap20-2E9Q0A8 60 aa1.78□□□□□ -2.12
Clk4-202ENSMUST00000109111 Sprr2iO70560 76 aa1.74□□□□□ -2.13
Clk4-202ENSMUST00000109111 Lce3bQ9CQM7 98 aa1.73□□□□□ -2.13
Clk4-202ENSMUST00000109111 Gm11938Q9D3H4 131 aa1.66□□□□□ -2.14
Clk4-202ENSMUST00000109111 ObscnA2AAJ9 8891 aaKnown RBP1.62□□□□□ -2.15
Clk4-202ENSMUST00000109111 Macf1Q9QXZ0 7354 aaKnown RBP1.58□□□□□ -2.16
Clk4-202ENSMUST00000109111 Sprr2dO70555 85 aa1.57□□□□□ -2.16
Clk4-202ENSMUST00000109111 Eppk1Q8R0W0 6548 aa1.57□□□□□ -2.16
Clk4-202ENSMUST00000109111 Mt1P02802 61 aaKnown RBP1.56□□□□□ -2.16
Clk4-202ENSMUST00000109111 Krtap19-4Q925H7 84 aa1.55□□□□□ -2.16
Clk4-202ENSMUST00000109111 Gm10024A0A0A0MQA4 119 aa1.54□□□□□ -2.16
Clk4-202ENSMUST00000109111 Muc19Q6PZE0 7524 aa1.49□□□□□ -2.17
Clk4-202ENSMUST00000109111 Gm11639A0A1D5RLM8 5808 aa1.48□□□□□ -2.17
Clk4-202ENSMUST00000109111 Sprr2fO70557 76 aa1.43□□□□□ -2.18
Clk4-202ENSMUST00000109111 DstQ91ZU6 7393 aaKnown RBP1.42□□□□□ -2.18
Clk4-202ENSMUST00000109111 Gpr98Q8VHN7 6298 aaKnown RBP1.38□□□□□ -2.19
Clk4-202ENSMUST00000109111 AhnakE9Q616 5656 aaKnown RBP1.37□□□□□ -2.19
Clk4-202ENSMUST00000109111 Sprr2hO70559 108 aa1.37□□□□□ -2.19
Clk4-202ENSMUST00000109111 NebE9Q1W3 7152 aa1.33□□□□□ -2.2
Clk4-202ENSMUST00000109111 Sprr2eO70556 76 aa1.32□□□□□ -2.2
Clk4-202ENSMUST00000109111 Muc16A0A140LJ72 8478 aa1.19□□□□□ -2.22
Clk4-202ENSMUST00000109111 Sprr2bO70554 98 aa0.92□□□□□ -2.26
Clk4-202ENSMUST00000109111 Phgr1Q8K0G7 91 aa0.81□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 7.5 ms