RNA–Protein interactions for RNA: ENSMUST00000109111.1

Clk4-202, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 2 BASIC

Gene Clk4, Length 1,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-202ENSMUST00000109111 Mapk8ip2Q9ERE9 830 aa27.67■■■□□ 2.02
Clk4-202ENSMUST00000109111 Chic1Q8CBW7 227 aa26.65■■□□□ 1.86
Clk4-202ENSMUST00000109111 Phf23Q8BSN5 401 aa23.83■■□□□ 1.4
Clk4-202ENSMUST00000109111 Gab3Q8BSM5 595 aa22.26■■□□□ 1.15
Clk4-202ENSMUST00000109111 Plppr3Q7TPB0 716 aa21.64■■□□□ 1.06
Clk4-202ENSMUST00000109111 Senp3Q9EP97 568 aaKnown RBP21.23■□□□□ 0.99
Clk4-202ENSMUST00000109111 Fam163aQ8CAA5 168 aa21.12■□□□□ 0.97
Clk4-202ENSMUST00000109111 GapdhsQ64467 440 aa19.31■□□□□ 0.68
Clk4-202ENSMUST00000109111 Hoxd11P23813 323 aa19.26■□□□□ 0.67
Clk4-202ENSMUST00000109111 ArsiQ32KI9 573 aa19.11■□□□□ 0.65
Clk4-202ENSMUST00000109111 Kcna4Q61423 654 aa18.8■□□□□ 0.6
Clk4-202ENSMUST00000109111 Znf219Q6IQX8 726 aa18.76■□□□□ 0.59
Clk4-202ENSMUST00000109111 Slc34a2Q9DBP0 697 aa18.65■□□□□ 0.58
Clk4-202ENSMUST00000109111 Trap1aP19473 224 aa18.6■□□□□ 0.57
Clk4-202ENSMUST00000109111 Dnajc5bQ9CQ94 199 aa18.09■□□□□ 0.49
Clk4-202ENSMUST00000109111 Chrna2Q91X60 512 aa17.85■□□□□ 0.45
Clk4-202ENSMUST00000109111 Akt1s1Q9D1F4 257 aa17.85■□□□□ 0.45
Clk4-202ENSMUST00000109111 Rsph4aQ8BYM7 716 aa17.83■□□□□ 0.45
Clk4-202ENSMUST00000109111 Rimbp2Q80U40 1072 aa17.72■□□□□ 0.43
Clk4-202ENSMUST00000109111 Znf704Q9ERQ3 566 aa17.09■□□□□ 0.33
Clk4-202ENSMUST00000109111 Slc4a5E9Q3M5 1116 aa17.06■□□□□ 0.32
Clk4-202ENSMUST00000109111 Dmrt2Q8BG36 561 aa16.76■□□□□ 0.27
Clk4-202ENSMUST00000109111 Cacnb1Q8R3Z5 597 aa16.55■□□□□ 0.24
Clk4-202ENSMUST00000109111 Atf5O70191 283 aa16.36■□□□□ 0.21
Clk4-202ENSMUST00000109111 Sox12Q04890 314 aa16.28■□□□□ 0.2
Clk4-202ENSMUST00000109111 Ildr2B5TVM2 661 aa16.15■□□□□ 0.18
Clk4-202ENSMUST00000109111 Bach1P97302 739 aa16.15■□□□□ 0.18
Clk4-202ENSMUST00000109111 Hs6st3Q9QYK4 470 aa16.15■□□□□ 0.18
Clk4-202ENSMUST00000109111 Znf703P0CL69 594 aa16.13■□□□□ 0.17
Clk4-202ENSMUST00000109111 Ppp4r2Q0VGB7 417 aa16.04■□□□□ 0.16
Clk4-202ENSMUST00000109111 Egfem1Q8C088 590 aa15.84■□□□□ 0.13
Clk4-202ENSMUST00000109111 Grwd1Q810D6 446 aaKnown RBP15.81■□□□□ 0.12
Clk4-202ENSMUST00000109111 Zbtb7aO88939 569 aaKnown RBP15.7■□□□□ 0.1
Clk4-202ENSMUST00000109111 Slc4a1apE9PX68 744 aa15.67■□□□□ 0.1
Clk4-202ENSMUST00000109111 Prr29B1ARI9 187 aa15.65■□□□□ 0.1
Clk4-202ENSMUST00000109111 Ppargc1bQ8VHJ7 1014 aa15.6■□□□□ 0.09
Clk4-202ENSMUST00000109111 Kcnn1Q9EQR3 537 aa15.6■□□□□ 0.09
Clk4-202ENSMUST00000109111 WdpcpQ8C456 722 aa15.44■□□□□ 0.06
Clk4-202ENSMUST00000109111 Abcb7Q61102 752 aaKnown RBP15.4■□□□□ 0.06
Clk4-202ENSMUST00000109111 Ifnlr1Q8CGK5 535 aa15.29■□□□□ 0.04
Clk4-202ENSMUST00000109111 1700123L14RikQ3V2K7 440 aa15.25■□□□□ 0.03
Clk4-202ENSMUST00000109111 Rnf216P58283 853 aa15.23■□□□□ 0.03
Clk4-202ENSMUST00000109111 Pip4p2Q9CZX7 257 aa15.17■□□□□ 0.02
Clk4-202ENSMUST00000109111 G430095P16RikE9Q913 147 aa15.16■□□□□ 0.02
Clk4-202ENSMUST00000109111 Nkx1-1G3UXB3 402 aa15.03■□□□□ -0
Clk4-202ENSMUST00000109111 Clcn6O35454 870 aa15.02■□□□□ -0
Clk4-202ENSMUST00000109111 Kank3Q9Z1P7 791 aa14.93□□□□□ -0.02
Clk4-202ENSMUST00000109111 Gtpbp6Q3U6U5 514 aa14.89□□□□□ -0.03
Clk4-202ENSMUST00000109111 Zbtb12Q9Z150 459 aa14.89□□□□□ -0.03
Clk4-202ENSMUST00000109111 Cdca7Q9D0M2 382 aa14.8□□□□□ -0.04
Clk4-202ENSMUST00000109111 C1qtnf12Q8R2Z0 308 aa14.67□□□□□ -0.06
Clk4-202ENSMUST00000109111 Pitpnm1O35954 1243 aa14.66□□□□□ -0.06
Clk4-202ENSMUST00000109111 Evx2P49749 475 aa14.56□□□□□ -0.08
Clk4-202ENSMUST00000109111 Trim35Q8C006 501 aa14.55□□□□□ -0.08
Clk4-202ENSMUST00000109111 Foxp4Q9DBY0 795 aaKnown RBP14.54□□□□□ -0.08
Clk4-202ENSMUST00000109111 ArntlQ9WTL8 632 aa14.45□□□□□ -0.1
Clk4-202ENSMUST00000109111 Ms4a5Q810P8 197 aa14.3□□□□□ -0.12
Clk4-202ENSMUST00000109111 Trim41Q5NCC3 630 aa14.21□□□□□ -0.13
Clk4-202ENSMUST00000109111 Riok3Q9DBU3 519 aaKnown RBP14.04□□□□□ -0.16
Clk4-202ENSMUST00000109111 Krtap4-1Q3UUY3 169 aa13.98□□□□□ -0.17
Clk4-202ENSMUST00000109111 Fxr2Q9WVR4 673 aaKnown RBP13.9□□□□□ -0.18
Clk4-202ENSMUST00000109111 Nlrp6Q91WS2 869 aa13.89□□□□□ -0.19
Clk4-202ENSMUST00000109111 Fbln2P37889 1221 aa13.88□□□□□ -0.19
Clk4-202ENSMUST00000109111 Npm2Q80W85 207 aa13.88□□□□□ -0.19
Clk4-202ENSMUST00000109111 Dok7Q18PE0 504 aa13.83□□□□□ -0.2
Clk4-202ENSMUST00000109111 Lhx8O35652 367 aa13.82□□□□□ -0.2
Clk4-202ENSMUST00000109111 MyclP10166 368 aa13.79□□□□□ -0.2
Clk4-202ENSMUST00000109111 Npm3Q9CPP0 175 aaKnown RBP13.71□□□□□ -0.22
Clk4-202ENSMUST00000109111 Cadps2Q8BYR5 1297 aa13.69□□□□□ -0.22
Clk4-202ENSMUST00000109111 Nyap1Q6PFX7 833 aa13.68□□□□□ -0.22
Clk4-202ENSMUST00000109111 Ehmt2Q9Z148 1263 aaKnown RBP13.66□□□□□ -0.22
Clk4-202ENSMUST00000109111 Skida1Q80YR3 822 aa13.6□□□□□ -0.23
Clk4-202ENSMUST00000109111 Kiaa1522A2A7S8 1013 aa13.57□□□□□ -0.24
Clk4-202ENSMUST00000109111 SnphQ80U23 495 aa13.56□□□□□ -0.24
Clk4-202ENSMUST00000109111 Gjc2Q8BQU6 440 aa13.56□□□□□ -0.24
Clk4-202ENSMUST00000109111 Fam71e1A1L3C1 212 aa13.52□□□□□ -0.25
Clk4-202ENSMUST00000109111 MpndQ3TV65 487 aa13.5□□□□□ -0.25
Clk4-202ENSMUST00000109111 Map3k10Q66L42 940 aa13.48□□□□□ -0.25
Clk4-202ENSMUST00000109111 AcrbpQ3V140 540 aa13.38□□□□□ -0.27
Clk4-202ENSMUST00000109111 Rnf225Q9D7D1 332 aa13.38□□□□□ -0.27
Clk4-202ENSMUST00000109111 Pde4cQ3UEI1 686 aa13.32□□□□□ -0.28
Clk4-202ENSMUST00000109111 Zranb1Q7M760 708 aa13.32□□□□□ -0.28
Clk4-202ENSMUST00000109111 Prm3Q62100 101 aa13.28□□□□□ -0.28
Clk4-202ENSMUST00000109111 Dcbld2Q91ZV3 769 aa13.28□□□□□ -0.28
Clk4-202ENSMUST00000109111 Styxl1Q9DAR2 321 aa13.25□□□□□ -0.29
Clk4-202ENSMUST00000109111 Znf710Q3U288 666 aa13.14□□□□□ -0.31
Clk4-202ENSMUST00000109111 Lrrc43Q3V0L5 667 aa13.14□□□□□ -0.31
Clk4-202ENSMUST00000109111 TMEM121BQ99MX7 572 aa13.14□□□□□ -0.31
Clk4-202ENSMUST00000109111 Jarid2Q62315 1234 aa13.08□□□□□ -0.32
Clk4-202ENSMUST00000109111 Gm11555B1AQ89 175 aa13□□□□□ -0.33
Clk4-202ENSMUST00000109111 Gm11563B1AQ90 168 aa12.98□□□□□ -0.33
Clk4-202ENSMUST00000109111 Krtap4-7Q9D732 168 aa12.98□□□□□ -0.33
Clk4-202ENSMUST00000109111 Hnrnpul2Q00PI9 745 aaKnown RBP12.96□□□□□ -0.33
Clk4-202ENSMUST00000109111 Ppp1r37Q8BKR5 712 aa12.93□□□□□ -0.34
Clk4-202ENSMUST00000109111 Pelp1Q9DBD5 1123 aaKnown RBP12.93□□□□□ -0.34
Clk4-202ENSMUST00000109111 Dmrta2A2A9A2 531 aa12.92□□□□□ -0.34
Clk4-202ENSMUST00000109111 Rtn4Q99P72 1162 aaKnown RBP12.9□□□□□ -0.34
Clk4-202ENSMUST00000109111 Pcdh10E9PXQ7 1057 aa12.87□□□□□ -0.35
Clk4-202ENSMUST00000109111 OsbpQ3B7Z2 805 aa12.87□□□□□ -0.35
Clk4-202ENSMUST00000109111 Sra1Q80VJ2 232 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 7.1 ms