RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Gm11568A2A4M2 211 aa3.46□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Krtap9-1Q64526 186 aa3.46□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Serp1Q9Z1W5 66 aa3.46□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Gm17606F6ZL36 78 aa3.43□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Phxr4P15974 95 aa3.43□□□□□ -1.86
Scn8a-202ENSMUST00000096198 H2al1aQ5M8Q2 105 aa3.43□□□□□ -1.86
Scn8a-202ENSMUST00000096198 H2al1eQ810S6 105 aa3.43□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Brk1Q91VR8 75 aa3.42□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Gm19426M0QWC7 77 aa3.41□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Pcp4P63054 62 aa3.41□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Limd2Q8BGB5 128 aa3.41□□□□□ -1.86
Scn8a-202ENSMUST00000096198 Gm10382Q3V0T5 144 aa3.4□□□□□ -1.87
Scn8a-202ENSMUST00000096198 Rps28P62858 69 aaKnown RBP3.39□□□□□ -1.87
Scn8a-202ENSMUST00000096198 Gm20537G3UYK7 97 aa3.38□□□□□ -1.87
Scn8a-202ENSMUST00000096198 Uqcr11Q9CPX8 56 aa3.38□□□□□ -1.87
Scn8a-202ENSMUST00000096198 AhnakE9Q616 5656 aaKnown RBP3.38□□□□□ -1.87
Scn8a-202ENSMUST00000096198 H2al1bA0A087WP11 105 aa3.36□□□□□ -1.87
Scn8a-202ENSMUST00000096198 BC029722A0A0N4SW31 51 aa3.35□□□□□ -1.87
Scn8a-202ENSMUST00000096198 Gm45337A0A1B0GS71 263 aa3.33□□□□□ -1.88
Scn8a-202ENSMUST00000096198 Gm10272F7CZ33 110 aa3.32□□□□□ -1.88
Scn8a-202ENSMUST00000096198 Ndufb1P0DN34 57 aa3.32□□□□□ -1.88
Scn8a-202ENSMUST00000096198 Sec61gP60060 68 aa3.29□□□□□ -1.88
Scn8a-202ENSMUST00000096198 CriptO70333 101 aa3.26□□□□□ -1.89
Scn8a-202ENSMUST00000096198 Gm9955Q8CEJ8 102 aa3.25□□□□□ -1.89
Scn8a-202ENSMUST00000096198 Gm10153A0A1B0GRL1 320 aa3.23□□□□□ -1.89
Scn8a-202ENSMUST00000096198 Spink7Q6IE32 76 aa3.22□□□□□ -1.89
Scn8a-202ENSMUST00000096198 Sprr2fO70557 76 aa3.21□□□□□ -1.9
Scn8a-202ENSMUST00000096198 SvipQ3UZP4 77 aa3.18□□□□□ -1.9
Scn8a-202ENSMUST00000096198 Syne1Q6ZWR6 8799 aa3.18□□□□□ -1.9
Scn8a-202ENSMUST00000096198 Gm17402F6Z0L5 76 aa3.17□□□□□ -1.9
Scn8a-202ENSMUST00000096198 Mt3P28184 68 aa3.17□□□□□ -1.9
Scn8a-202ENSMUST00000096198 Sprr2a3Q4KL71 83 aa3.16□□□□□ -1.9
Scn8a-202ENSMUST00000096198 Sprr2a1Q9CQK8 83 aa3.16□□□□□ -1.9
Scn8a-202ENSMUST00000096198 Gm40460A0A1B0GR10 244 aa3.15□□□□□ -1.91
Scn8a-202ENSMUST00000096198 Gm7579A0A1B0GRJ4 243 aa3.15□□□□□ -1.91
Scn8a-202ENSMUST00000096198 Krtap5-5Q2TA51 241 aa3.15□□□□□ -1.91
Scn8a-202ENSMUST00000096198 Krtap5-4Q62220 223 aa3.15□□□□□ -1.91
Scn8a-202ENSMUST00000096198 4933415A04RikQ9D443 101 aa3.13□□□□□ -1.91
Scn8a-202ENSMUST00000096198 H2al1kJ3QP08 105 aa3.1□□□□□ -1.91
Scn8a-202ENSMUST00000096198 Krtap19-4Q925H7 84 aa3.08□□□□□ -1.92
Scn8a-202ENSMUST00000096198 Gm3880A0A1B0GSB3 72 aa3.04□□□□□ -1.92
Scn8a-202ENSMUST00000096198 Gm10337F7DEP7 55 aa3.02□□□□□ -1.93
Scn8a-202ENSMUST00000096198 H2al1mQ9DAD9 105 aa3.02□□□□□ -1.93
Scn8a-202ENSMUST00000096198 Gm3646F6S692 53 aa3.01□□□□□ -1.93
Scn8a-202ENSMUST00000096198 Ndufs5Q99LY9 106 aa3□□□□□ -1.93
Scn8a-202ENSMUST00000096198 Lce3bQ9CQM7 98 aa2.98□□□□□ -1.93
Scn8a-202ENSMUST00000096198 Camk2n1Q6QWF9 78 aa2.91□□□□□ -1.94
Scn8a-202ENSMUST00000096198 Gm12216A0A1W2P827 62 aa2.89□□□□□ -1.95
Scn8a-202ENSMUST00000096198 Romo1P60603 79 aa2.88□□□□□ -1.95
Scn8a-202ENSMUST00000096198 Krtap19-9bQ99NG9 58 aa2.85□□□□□ -1.95
Scn8a-202ENSMUST00000096198 Mt1P02802 61 aaKnown RBP2.75□□□□□ -1.97
Scn8a-202ENSMUST00000096198 Gm11938Q9D3H4 131 aa2.71□□□□□ -1.98
Scn8a-202ENSMUST00000096198 Krtap7-1Q9D3I6 87 aa2.64□□□□□ -1.99
Scn8a-202ENSMUST00000096198 Gm40193A0A1B0GT39 78 aa2.61□□□□□ -1.99
Scn8a-202ENSMUST00000096198 Tnp1P10856 55 aa2.58□□□□□ -2
Scn8a-202ENSMUST00000096198 Sprr2hO70559 108 aa2.57□□□□□ -2
Scn8a-202ENSMUST00000096198 Krtap5-1Q64507 230 aa2.5□□□□□ -2.01
Scn8a-202ENSMUST00000096198 Muc16A0A140LJ72 8478 aa2.47□□□□□ -2.01
Scn8a-202ENSMUST00000096198 ObscnA2AAJ9 8891 aaKnown RBP2.46□□□□□ -2.02
Scn8a-202ENSMUST00000096198 Gm4559A4IF42 199 aa2.46□□□□□ -2.02
Scn8a-202ENSMUST00000096198 Mp68P56379 58 aa2.43□□□□□ -2.02
Scn8a-202ENSMUST00000096198 Lce3cQ91V05 98 aa2.41□□□□□ -2.02
Scn8a-202ENSMUST00000096198 Lce3dE9Q8V1 98 aa2.33□□□□□ -2.04
Scn8a-202ENSMUST00000096198 Lce3aQ497I5 98 aa2.33□□□□□ -2.04
Scn8a-202ENSMUST00000096198 Sprr2eO70556 76 aa2.3□□□□□ -2.04
Scn8a-202ENSMUST00000096198 Sprr2dO70555 85 aa2.25□□□□□ -2.05
Scn8a-202ENSMUST00000096198 Gm20538F6Z9R1 75 aa2.17□□□□□ -2.06
Scn8a-202ENSMUST00000096198 Lce3eF8VQJ0 98 aa2.15□□□□□ -2.07
Scn8a-202ENSMUST00000096198 Lce3fQ6PAI4 98 aa2.15□□□□□ -2.07
Scn8a-202ENSMUST00000096198 4933428G20RikQ9D3X4 101 aa2.06□□□□□ -2.08
Scn8a-202ENSMUST00000096198 Gm10024A0A0A0MQA4 119 aa2.05□□□□□ -2.08
Scn8a-202ENSMUST00000096198 Ndufaf8A2AMZ4 74 aa2□□□□□ -2.09
Scn8a-202ENSMUST00000096198 Gm10229O08631 77 aa1.99□□□□□ -2.09
Scn8a-202ENSMUST00000096198 Sprr2bO70554 98 aa1.97□□□□□ -2.09
Scn8a-202ENSMUST00000096198 Krtap6-5Q925H3 78 aa1.93□□□□□ -2.1
Scn8a-202ENSMUST00000096198 1110025L11RikO09048 78 aa1.74□□□□□ -2.13
Scn8a-202ENSMUST00000096198 Gm9112A2AI92 75 aa1.65□□□□□ -2.15
Scn8a-202ENSMUST00000096198 Krtap6-2O08884 159 aa1.62□□□□□ -2.15
Scn8a-202ENSMUST00000096198 Krtap21-1Q925H4 128 aa1.38□□□□□ -2.19
Scn8a-202ENSMUST00000096198 Phgr1Q8K0G7 91 aa1.18□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 857.7 ms