RNA–Protein interactions for RNA: ENSMUST00000090134.11

Pdlim5-203, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-203ENSMUST00000090134 Sprr2a1Q9CQK8 83 aa3.37□□□□□ -1.87
Pdlim5-203ENSMUST00000090134 Gm11596B1AQB0 205 aa3.36□□□□□ -1.87
Pdlim5-203ENSMUST00000090134 Crct1Q6PAI5 102 aa3.32□□□□□ -1.88
Pdlim5-203ENSMUST00000090134 Spink7Q6IE32 76 aa3.3□□□□□ -1.88
Pdlim5-203ENSMUST00000090134 Herc1E9PZP8 4859 aa3.3□□□□□ -1.88
Pdlim5-203ENSMUST00000090134 Krtap5-5Q2TA51 241 aa3.27□□□□□ -1.89
Pdlim5-203ENSMUST00000090134 Gm10318A0A1W2P728 225 aa3.27□□□□□ -1.89
Pdlim5-203ENSMUST00000090134 4933428G20RikQ9D3X4 101 aa3.24□□□□□ -1.89
Pdlim5-203ENSMUST00000090134 Prm1P02319 51 aa3.23□□□□□ -1.89
Pdlim5-203ENSMUST00000090134 Gm9789Q8BIG3 52 aa3.23□□□□□ -1.89
Pdlim5-203ENSMUST00000090134 Ush2AQ2QI47 5193 aa3.2□□□□□ -1.9
Pdlim5-203ENSMUST00000090134 Gm7735D3YX18 52 aa3.19□□□□□ -1.9
Pdlim5-203ENSMUST00000090134 Hmcn2A2AJ76 5100 aa3.18□□□□□ -1.9
Pdlim5-203ENSMUST00000090134 Krtap19-9aF8WH65 55 aa3.14□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 4932415D10RikA0A1W2P6U8 4986 aa3.14□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 Gm11568A2A4M2 211 aa3.13□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 Krtap9-1Q64526 186 aa3.13□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 ZanO88799 5376 aa3.12□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 Ubr4A2AN08 5180 aa3.11□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 Gm40460A0A1B0GR10 244 aa3.1□□□□□ -1.91
Pdlim5-203ENSMUST00000090134 Krtap5-2Q9D5Z7 189 aa3.08□□□□□ -1.92
Pdlim5-203ENSMUST00000090134 Rnf213E9Q555 5152 aaKnown RBP3.06□□□□□ -1.92
Pdlim5-203ENSMUST00000090134 Fat4Q2PZL6 4981 aa3.02□□□□□ -1.93
Pdlim5-203ENSMUST00000090134 Krtap8-1O08633 61 aa2.99□□□□□ -1.93
Pdlim5-203ENSMUST00000090134 Krtap19-2Q925I0 141 aa2.99□□□□□ -1.93
Pdlim5-203ENSMUST00000090134 Tnp1P10856 55 aa2.98□□□□□ -1.93
Pdlim5-203ENSMUST00000090134 SspoQ8CG65 4998 aa2.97□□□□□ -1.93
Pdlim5-203ENSMUST00000090134 Gm7579A0A1B0GRJ4 243 aa2.96□□□□□ -1.93
Pdlim5-203ENSMUST00000090134 Krtap9-3Q3V2C1 136 aa2.95□□□□□ -1.94
Pdlim5-203ENSMUST00000090134 Krtap19-9bQ99NG9 58 aa2.94□□□□□ -1.94
Pdlim5-203ENSMUST00000090134 Gm10061D3Z714 54 aa2.89□□□□□ -1.95
Pdlim5-203ENSMUST00000090134 2310046K23RikA0A0A6YVW6 87 aa2.87□□□□□ -1.95
Pdlim5-203ENSMUST00000090134 Sprr2iO70560 76 aa2.83□□□□□ -1.96
Pdlim5-203ENSMUST00000090134 Gm6358A0A087WPH4 74 aa2.8□□□□□ -1.96
Pdlim5-203ENSMUST00000090134 Mt2P02798 61 aa2.78□□□□□ -1.96
Pdlim5-203ENSMUST00000090134 Muc5bE9Q5I3 4800 aa2.76□□□□□ -1.97
Pdlim5-203ENSMUST00000090134 Gm10024A0A0A0MQA4 119 aa2.72□□□□□ -1.97
Pdlim5-203ENSMUST00000090134 Gm11564A2A4L9 201 aa2.64□□□□□ -1.99
Pdlim5-203ENSMUST00000090134 Krtap22-2J3QNX6 67 aa2.63□□□□□ -1.99
Pdlim5-203ENSMUST00000090134 Sprr2fO70557 76 aa2.62□□□□□ -1.99
Pdlim5-203ENSMUST00000090134 Sprr2gO70558 76 aa2.55□□□□□ -2
Pdlim5-203ENSMUST00000090134 Sprr2dO70555 85 aa2.53□□□□□ -2
Pdlim5-203ENSMUST00000090134 Gm11938Q9D3H4 131 aa2.49□□□□□ -2.01
Pdlim5-203ENSMUST00000090134 Mdn1A2ANY6 5589 aaKnown RBP2.48□□□□□ -2.01
Pdlim5-203ENSMUST00000090134 Syne2Q6ZWQ0 6874 aaKnown RBP2.47□□□□□ -2.01
Pdlim5-203ENSMUST00000090134 Kmt2dQ6PDK2 5588 aa2.45□□□□□ -2.02
Pdlim5-203ENSMUST00000090134 Gpr98Q8VHN7 6298 aaKnown RBP2.4□□□□□ -2.02
Pdlim5-203ENSMUST00000090134 Lce3dE9Q8V1 98 aa2.39□□□□□ -2.03
Pdlim5-203ENSMUST00000090134 Lce3aQ497I5 98 aa2.39□□□□□ -2.03
Pdlim5-203ENSMUST00000090134 Krtap19-4Q925H7 84 aa2.39□□□□□ -2.03
Pdlim5-203ENSMUST00000090134 Sprr2kO70562 68 aa2.38□□□□□ -2.03
Pdlim5-203ENSMUST00000090134 Eppk1Q8R0W0 6548 aa2.32□□□□□ -2.04
Pdlim5-203ENSMUST00000090134 Mt4P47945 62 aa2.31□□□□□ -2.04
Pdlim5-203ENSMUST00000090134 Sprr2eO70556 76 aa2.3□□□□□ -2.04
Pdlim5-203ENSMUST00000090134 Lce3bQ9CQM7 98 aa2.3□□□□□ -2.04
Pdlim5-203ENSMUST00000090134 Fsip2A2ARZ3 6995 aa2.25□□□□□ -2.05
Pdlim5-203ENSMUST00000090134 Syne1Q6ZWR6 8799 aa2.2□□□□□ -2.06
Pdlim5-203ENSMUST00000090134 Lce3cQ91V05 98 aa2.2□□□□□ -2.06
Pdlim5-203ENSMUST00000090134 Sprr2hO70559 108 aa2.19□□□□□ -2.06
Pdlim5-203ENSMUST00000090134 DstQ91ZU6 7393 aaKnown RBP2.18□□□□□ -2.06
Pdlim5-203ENSMUST00000090134 Lce3eF8VQJ0 98 aa2.18□□□□□ -2.06
Pdlim5-203ENSMUST00000090134 Lce3fQ6PAI4 98 aa2.18□□□□□ -2.06
Pdlim5-203ENSMUST00000090134 Mt1P02802 61 aaKnown RBP2.13□□□□□ -2.07
Pdlim5-203ENSMUST00000090134 Gm11639A0A1D5RLM8 5808 aa2.11□□□□□ -2.07
Pdlim5-203ENSMUST00000090134 Krtap6-3A0A087WQL6 57 aa2.11□□□□□ -2.07
Pdlim5-203ENSMUST00000090134 ObscnA2AAJ9 8891 aaKnown RBP2.07□□□□□ -2.08
Pdlim5-203ENSMUST00000090134 Krtap6-5Q925H3 78 aa2.07□□□□□ -2.08
Pdlim5-203ENSMUST00000090134 Gm10229O08631 77 aa2.04□□□□□ -2.08
Pdlim5-203ENSMUST00000090134 Krtap20-2E9Q0A8 60 aa2.02□□□□□ -2.09
Pdlim5-203ENSMUST00000090134 Krtap4-16Q91W93 202 aa2□□□□□ -2.09
Pdlim5-203ENSMUST00000090134 Macf1Q9QXZ0 7354 aaKnown RBP1.96□□□□□ -2.1
Pdlim5-203ENSMUST00000090134 Muc19Q6PZE0 7524 aa1.76□□□□□ -2.13
Pdlim5-203ENSMUST00000090134 NebE9Q1W3 7152 aa1.7□□□□□ -2.14
Pdlim5-203ENSMUST00000090134 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Pdlim5-203ENSMUST00000090134 1110025L11RikO09048 78 aa1.64□□□□□ -2.15
Pdlim5-203ENSMUST00000090134 Sprr2bO70554 98 aa1.54□□□□□ -2.16
Pdlim5-203ENSMUST00000090134 AhnakE9Q616 5656 aaKnown RBP1.49□□□□□ -2.17
Pdlim5-203ENSMUST00000090134 Muc16A0A140LJ72 8478 aa1.48□□□□□ -2.17
Pdlim5-203ENSMUST00000090134 Krtap21-1Q925H4 128 aa1.39□□□□□ -2.19
Pdlim5-203ENSMUST00000090134 Phgr1Q8K0G7 91 aa1.29□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 132 ms