RNA–Protein interactions for RNA: ENSMUST00000074067.3

Trim38-201, Transcript of Tripartite motif-containing 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim38, Length 1,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38-201ENSMUST00000074067 Krtap19-1Q925H2 87 aa2.39□□□□□ -2.03
Trim38-201ENSMUST00000074067 Crct1Q6PAI5 102 aa2.39□□□□□ -2.03
Trim38-201ENSMUST00000074067 Sprr2a3Q4KL71 83 aa2.38□□□□□ -2.03
Trim38-201ENSMUST00000074067 Sprr2a1Q9CQK8 83 aa2.38□□□□□ -2.03
Trim38-201ENSMUST00000074067 Krtap19-3Q925H6 87 aa2.37□□□□□ -2.03
Trim38-201ENSMUST00000074067 Lce3dE9Q8V1 98 aa2.35□□□□□ -2.03
Trim38-201ENSMUST00000074067 Lce3aQ497I5 98 aa2.35□□□□□ -2.03
Trim38-201ENSMUST00000074067 Krtap1-4Q3V2D6 188 aa2.33□□□□□ -2.04
Trim38-201ENSMUST00000074067 Herc1E9PZP8 4859 aa2.32□□□□□ -2.04
Trim38-201ENSMUST00000074067 Prm1P02319 51 aa2.31□□□□□ -2.04
Trim38-201ENSMUST00000074067 Gm9789Q8BIG3 52 aa2.3□□□□□ -2.04
Trim38-201ENSMUST00000074067 Gm7735D3YX18 52 aa2.26□□□□□ -2.05
Trim38-201ENSMUST00000074067 Krtap19-9aF8WH65 55 aa2.26□□□□□ -2.05
Trim38-201ENSMUST00000074067 Gm11562A0PK51 136 aa2.26□□□□□ -2.05
Trim38-201ENSMUST00000074067 Ush2AQ2QI47 5193 aa2.25□□□□□ -2.05
Trim38-201ENSMUST00000074067 Hmcn2A2AJ76 5100 aa2.25□□□□□ -2.05
Trim38-201ENSMUST00000074067 Krtap7-1Q9D3I6 87 aa2.24□□□□□ -2.05
Trim38-201ENSMUST00000074067 ZanO88799 5376 aa2.23□□□□□ -2.05
Trim38-201ENSMUST00000074067 4932415D10RikA0A1W2P6U8 4986 aa2.23□□□□□ -2.05
Trim38-201ENSMUST00000074067 Ubr4A2AN08 5180 aa2.21□□□□□ -2.05
Trim38-201ENSMUST00000074067 Gm11564A2A4L9 201 aa2.21□□□□□ -2.06
Trim38-201ENSMUST00000074067 Rnf213E9Q555 5152 aaKnown RBP2.2□□□□□ -2.06
Trim38-201ENSMUST00000074067 Tnp1P10856 55 aa2.19□□□□□ -2.06
Trim38-201ENSMUST00000074067 Krtap17-1A2A5X6 109 aa2.18□□□□□ -2.06
Trim38-201ENSMUST00000074067 Krtap5-5Q2TA51 241 aa2.18□□□□□ -2.06
Trim38-201ENSMUST00000074067 Fat4Q2PZL6 4981 aa2.17□□□□□ -2.06
Trim38-201ENSMUST00000074067 4933428G20RikQ9D3X4 101 aa2.14□□□□□ -2.07
Trim38-201ENSMUST00000074067 Krtap8-1O08633 61 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Lce3fQ6PAI4 98 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Lce3cQ91V05 98 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Krtap19-9bQ99NG9 58 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Krtap19-2Q925I0 141 aa2.11□□□□□ -2.07
Trim38-201ENSMUST00000074067 SspoQ8CG65 4998 aa2.08□□□□□ -2.08
Trim38-201ENSMUST00000074067 Gm10061D3Z714 54 aa2.07□□□□□ -2.08
Trim38-201ENSMUST00000074067 Gm10229O08631 77 aa2.03□□□□□ -2.08
Trim38-201ENSMUST00000074067 Kmt2dQ6PDK2 5588 aa2□□□□□ -2.09
Trim38-201ENSMUST00000074067 Gm6358A0A087WPH4 74 aa2□□□□□ -2.09
Trim38-201ENSMUST00000074067 Krtap6-5Q925H3 78 aa1.99□□□□□ -2.09
Trim38-201ENSMUST00000074067 Mt2P02798 61 aa1.98□□□□□ -2.09
Trim38-201ENSMUST00000074067 2310046K23RikA0A0A6YVW6 87 aa1.97□□□□□ -2.09
Trim38-201ENSMUST00000074067 Gm40460A0A1B0GR10 244 aa1.97□□□□□ -2.09
Trim38-201ENSMUST00000074067 Hmcn1D3YXG0 5634 aa1.96□□□□□ -2.1
Trim38-201ENSMUST00000074067 Muc5bE9Q5I3 4800 aa1.96□□□□□ -2.1
Trim38-201ENSMUST00000074067 Krtap22-2J3QNX6 67 aa1.89□□□□□ -2.11
Trim38-201ENSMUST00000074067 Lce3eF8VQJ0 98 aa1.78□□□□□ -2.12
Trim38-201ENSMUST00000074067 Sprr2gO70558 76 aa1.78□□□□□ -2.12
Trim38-201ENSMUST00000074067 Mdn1A2ANY6 5589 aaKnown RBP1.76□□□□□ -2.13
Trim38-201ENSMUST00000074067 Syne2Q6ZWQ0 6874 aaKnown RBP1.75□□□□□ -2.13
Trim38-201ENSMUST00000074067 Sprr2dO70555 85 aa1.75□□□□□ -2.13
Trim38-201ENSMUST00000074067 Gm11938Q9D3H4 131 aa1.75□□□□□ -2.13
Trim38-201ENSMUST00000074067 Gm10024A0A0A0MQA4 119 aa1.73□□□□□ -2.13
Trim38-201ENSMUST00000074067 Sprr2iO70560 76 aa1.71□□□□□ -2.14
Trim38-201ENSMUST00000074067 Krtap19-4Q925H7 84 aa1.7□□□□□ -2.14
Trim38-201ENSMUST00000074067 Lce3bQ9CQM7 98 aa1.7□□□□□ -2.14
Trim38-201ENSMUST00000074067 Fsip2A2ARZ3 6995 aa1.67□□□□□ -2.14
Trim38-201ENSMUST00000074067 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Trim38-201ENSMUST00000074067 Mt4P47945 62 aa1.66□□□□□ -2.14
Trim38-201ENSMUST00000074067 Sprr2kO70562 68 aa1.64□□□□□ -2.15
Trim38-201ENSMUST00000074067 Sprr2fO70557 76 aa1.6□□□□□ -2.15
Trim38-201ENSMUST00000074067 Syne1Q6ZWR6 8799 aa1.59□□□□□ -2.16
Trim38-201ENSMUST00000074067 Krtap4-16Q91W93 202 aa1.56□□□□□ -2.16
Trim38-201ENSMUST00000074067 Sprr2hO70559 108 aa1.51□□□□□ -2.17
Trim38-201ENSMUST00000074067 Mt1P02802 61 aaKnown RBP1.5□□□□□ -2.17
Trim38-201ENSMUST00000074067 Krtap6-3A0A087WQL6 57 aa1.49□□□□□ -2.17
Trim38-201ENSMUST00000074067 Sprr2eO70556 76 aa1.49□□□□□ -2.17
Trim38-201ENSMUST00000074067 ObscnA2AAJ9 8891 aaKnown RBP1.47□□□□□ -2.17
Trim38-201ENSMUST00000074067 Krtap20-2E9Q0A8 60 aa1.44□□□□□ -2.18
Trim38-201ENSMUST00000074067 Krtap21-1Q925H4 128 aa1.39□□□□□ -2.19
Trim38-201ENSMUST00000074067 1110025L11RikO09048 78 aa1.35□□□□□ -2.19
Trim38-201ENSMUST00000074067 Macf1Q9QXZ0 7354 aaKnown RBP1.32□□□□□ -2.2
Trim38-201ENSMUST00000074067 DstQ91ZU6 7393 aaKnown RBP1.23□□□□□ -2.21
Trim38-201ENSMUST00000074067 Eppk1Q8R0W0 6548 aa1.21□□□□□ -2.22
Trim38-201ENSMUST00000074067 Muc19Q6PZE0 7524 aa1.15□□□□□ -2.23
Trim38-201ENSMUST00000074067 Gm11639A0A1D5RLM8 5808 aa1.14□□□□□ -2.23
Trim38-201ENSMUST00000074067 Gpr98Q8VHN7 6298 aaKnown RBP1.13□□□□□ -2.23
Trim38-201ENSMUST00000074067 AhnakE9Q616 5656 aaKnown RBP1.11□□□□□ -2.23
Trim38-201ENSMUST00000074067 Sprr2bO70554 98 aa1.11□□□□□ -2.23
Trim38-201ENSMUST00000074067 NebE9Q1W3 7152 aa1.07□□□□□ -2.24
Trim38-201ENSMUST00000074067 Muc16A0A140LJ72 8478 aa1.03□□□□□ -2.24
Trim38-201ENSMUST00000074067 Phgr1Q8K0G7 91 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 179.6 ms