RNA–Protein interactions for RNA: ENSMUST00000074067.3

Trim38-201, Transcript of Tripartite motif-containing 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim38, Length 1,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38-201ENSMUST00000074067 Krtap19-1Q925H2 87 aa2.39□□□□□ -2.03
Trim38-201ENSMUST00000074067 Crct1Q6PAI5 102 aa2.39□□□□□ -2.03
Trim38-201ENSMUST00000074067 Sprr2a3Q4KL71 83 aa2.38□□□□□ -2.03
Trim38-201ENSMUST00000074067 Sprr2a1Q9CQK8 83 aa2.38□□□□□ -2.03
Trim38-201ENSMUST00000074067 Krtap19-3Q925H6 87 aa2.37□□□□□ -2.03
Trim38-201ENSMUST00000074067 Lce3dE9Q8V1 98 aa2.35□□□□□ -2.03
Trim38-201ENSMUST00000074067 Lce3aQ497I5 98 aa2.35□□□□□ -2.03
Trim38-201ENSMUST00000074067 Krtap1-4Q3V2D6 188 aa2.33□□□□□ -2.04
Trim38-201ENSMUST00000074067 Herc1E9PZP8 4859 aa2.32□□□□□ -2.04
Trim38-201ENSMUST00000074067 Prm1P02319 51 aa2.31□□□□□ -2.04
Trim38-201ENSMUST00000074067 Gm9789Q8BIG3 52 aa2.3□□□□□ -2.04
Trim38-201ENSMUST00000074067 Gm7735D3YX18 52 aa2.26□□□□□ -2.05
Trim38-201ENSMUST00000074067 Krtap19-9aF8WH65 55 aa2.26□□□□□ -2.05
Trim38-201ENSMUST00000074067 Gm11562A0PK51 136 aa2.26□□□□□ -2.05
Trim38-201ENSMUST00000074067 Ush2AQ2QI47 5193 aa2.25□□□□□ -2.05
Trim38-201ENSMUST00000074067 Hmcn2A2AJ76 5100 aa2.25□□□□□ -2.05
Trim38-201ENSMUST00000074067 Krtap7-1Q9D3I6 87 aa2.24□□□□□ -2.05
Trim38-201ENSMUST00000074067 ZanO88799 5376 aa2.23□□□□□ -2.05
Trim38-201ENSMUST00000074067 4932415D10RikA0A1W2P6U8 4986 aa2.23□□□□□ -2.05
Trim38-201ENSMUST00000074067 Ubr4A2AN08 5180 aa2.21□□□□□ -2.05
Trim38-201ENSMUST00000074067 Gm11564A2A4L9 201 aa2.21□□□□□ -2.06
Trim38-201ENSMUST00000074067 Rnf213E9Q555 5152 aaKnown RBP2.2□□□□□ -2.06
Trim38-201ENSMUST00000074067 Tnp1P10856 55 aa2.19□□□□□ -2.06
Trim38-201ENSMUST00000074067 Krtap17-1A2A5X6 109 aa2.18□□□□□ -2.06
Trim38-201ENSMUST00000074067 Krtap5-5Q2TA51 241 aa2.18□□□□□ -2.06
Trim38-201ENSMUST00000074067 Fat4Q2PZL6 4981 aa2.17□□□□□ -2.06
Trim38-201ENSMUST00000074067 4933428G20RikQ9D3X4 101 aa2.14□□□□□ -2.07
Trim38-201ENSMUST00000074067 Krtap8-1O08633 61 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Lce3fQ6PAI4 98 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Lce3cQ91V05 98 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Krtap19-9bQ99NG9 58 aa2.12□□□□□ -2.07
Trim38-201ENSMUST00000074067 Krtap19-2Q925I0 141 aa2.11□□□□□ -2.07
Trim38-201ENSMUST00000074067 SspoQ8CG65 4998 aa2.08□□□□□ -2.08
Trim38-201ENSMUST00000074067 Gm10061D3Z714 54 aa2.07□□□□□ -2.08
Trim38-201ENSMUST00000074067 Gm10229O08631 77 aa2.03□□□□□ -2.08
Trim38-201ENSMUST00000074067 Kmt2dQ6PDK2 5588 aa2□□□□□ -2.09
Trim38-201ENSMUST00000074067 Gm6358A0A087WPH4 74 aa2□□□□□ -2.09
Trim38-201ENSMUST00000074067 Krtap6-5Q925H3 78 aa1.99□□□□□ -2.09
Trim38-201ENSMUST00000074067 Mt2P02798 61 aa1.98□□□□□ -2.09
Trim38-201ENSMUST00000074067 2310046K23RikA0A0A6YVW6 87 aa1.97□□□□□ -2.09
Trim38-201ENSMUST00000074067 Gm40460A0A1B0GR10 244 aa1.97□□□□□ -2.09
Trim38-201ENSMUST00000074067 Hmcn1D3YXG0 5634 aa1.96□□□□□ -2.1
Trim38-201ENSMUST00000074067 Muc5bE9Q5I3 4800 aa1.96□□□□□ -2.1
Trim38-201ENSMUST00000074067 Krtap22-2J3QNX6 67 aa1.89□□□□□ -2.11
Trim38-201ENSMUST00000074067 Lce3eF8VQJ0 98 aa1.78□□□□□ -2.12
Trim38-201ENSMUST00000074067 Sprr2gO70558 76 aa1.78□□□□□ -2.12
Trim38-201ENSMUST00000074067 Mdn1A2ANY6 5589 aaKnown RBP1.76□□□□□ -2.13
Trim38-201ENSMUST00000074067 Syne2Q6ZWQ0 6874 aaKnown RBP1.75□□□□□ -2.13
Trim38-201ENSMUST00000074067 Sprr2dO70555 85 aa1.75□□□□□ -2.13
Trim38-201ENSMUST00000074067 Gm11938Q9D3H4 131 aa1.75□□□□□ -2.13
Trim38-201ENSMUST00000074067 Gm10024A0A0A0MQA4 119 aa1.73□□□□□ -2.13
Trim38-201ENSMUST00000074067 Sprr2iO70560 76 aa1.71□□□□□ -2.14
Trim38-201ENSMUST00000074067 Krtap19-4Q925H7 84 aa1.7□□□□□ -2.14
Trim38-201ENSMUST00000074067 Lce3bQ9CQM7 98 aa1.7□□□□□ -2.14
Trim38-201ENSMUST00000074067 Fsip2A2ARZ3 6995 aa1.67□□□□□ -2.14
Trim38-201ENSMUST00000074067 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Trim38-201ENSMUST00000074067 Mt4P47945 62 aa1.66□□□□□ -2.14
Trim38-201ENSMUST00000074067 Sprr2kO70562 68 aa1.64□□□□□ -2.15
Trim38-201ENSMUST00000074067 Sprr2fO70557 76 aa1.6□□□□□ -2.15
Trim38-201ENSMUST00000074067 Syne1Q6ZWR6 8799 aa1.59□□□□□ -2.16
Trim38-201ENSMUST00000074067 Krtap4-16Q91W93 202 aa1.56□□□□□ -2.16
Trim38-201ENSMUST00000074067 Sprr2hO70559 108 aa1.51□□□□□ -2.17
Trim38-201ENSMUST00000074067 Mt1P02802 61 aaKnown RBP1.5□□□□□ -2.17
Trim38-201ENSMUST00000074067 Krtap6-3A0A087WQL6 57 aa1.49□□□□□ -2.17
Trim38-201ENSMUST00000074067 Sprr2eO70556 76 aa1.49□□□□□ -2.17
Trim38-201ENSMUST00000074067 ObscnA2AAJ9 8891 aaKnown RBP1.47□□□□□ -2.17
Trim38-201ENSMUST00000074067 Krtap20-2E9Q0A8 60 aa1.44□□□□□ -2.18
Trim38-201ENSMUST00000074067 Krtap21-1Q925H4 128 aa1.39□□□□□ -2.19
Trim38-201ENSMUST00000074067 1110025L11RikO09048 78 aa1.35□□□□□ -2.19
Trim38-201ENSMUST00000074067 Macf1Q9QXZ0 7354 aaKnown RBP1.32□□□□□ -2.2
Trim38-201ENSMUST00000074067 DstQ91ZU6 7393 aaKnown RBP1.23□□□□□ -2.21
Trim38-201ENSMUST00000074067 Eppk1Q8R0W0 6548 aa1.21□□□□□ -2.22
Trim38-201ENSMUST00000074067 Muc19Q6PZE0 7524 aa1.15□□□□□ -2.23
Trim38-201ENSMUST00000074067 Gm11639A0A1D5RLM8 5808 aa1.14□□□□□ -2.23
Trim38-201ENSMUST00000074067 Gpr98Q8VHN7 6298 aaKnown RBP1.13□□□□□ -2.23
Trim38-201ENSMUST00000074067 AhnakE9Q616 5656 aaKnown RBP1.11□□□□□ -2.23
Trim38-201ENSMUST00000074067 Sprr2bO70554 98 aa1.11□□□□□ -2.23
Trim38-201ENSMUST00000074067 NebE9Q1W3 7152 aa1.07□□□□□ -2.24
Trim38-201ENSMUST00000074067 Muc16A0A140LJ72 8478 aa1.03□□□□□ -2.24
Trim38-201ENSMUST00000074067 Phgr1Q8K0G7 91 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 13.6 ms