RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 Krtap4-13Q9D7P3 165 aa4.68□□□□□ -1.66
Rai1-201ENSMUST00000064190 Lce1kJ3QP15 125 aa4.67□□□□□ -1.66
Rai1-201ENSMUST00000064190 Gm11562A0PK51 136 aa4.64□□□□□ -1.67
Rai1-201ENSMUST00000064190 Herc2Q4U2R1 4836 aa4.57□□□□□ -1.68
Rai1-201ENSMUST00000064190 Krtap17-1A2A5X6 109 aa4.49□□□□□ -1.69
Rai1-201ENSMUST00000064190 PcloQ9QYX7 5068 aa4.49□□□□□ -1.69
Rai1-201ENSMUST00000064190 Fsip2A2ARZ3 6995 aa4.47□□□□□ -1.69
Rai1-201ENSMUST00000064190 Gm11938Q9D3H4 131 aa4.47□□□□□ -1.69
Rai1-201ENSMUST00000064190 Mt3P28184 68 aa4.45□□□□□ -1.7
Rai1-201ENSMUST00000064190 Syne2Q6ZWQ0 6874 aaKnown RBP4.43□□□□□ -1.7
Rai1-201ENSMUST00000064190 Ryr2E9Q401 4966 aaKnown RBP4.43□□□□□ -1.7
Rai1-201ENSMUST00000064190 HydinQ80W93 5154 aa4.42□□□□□ -1.7
Rai1-201ENSMUST00000064190 Birc6O88738 4882 aa4.35□□□□□ -1.71
Rai1-201ENSMUST00000064190 Herc1E9PZP8 4859 aa4.32□□□□□ -1.72
Rai1-201ENSMUST00000064190 Syne1Q6ZWR6 8799 aa4.32□□□□□ -1.72
Rai1-201ENSMUST00000064190 Gm11554B1AQB2 190 aa4.3□□□□□ -1.72
Rai1-201ENSMUST00000064190 Mdn1A2ANY6 5589 aaKnown RBP4.3□□□□□ -1.72
Rai1-201ENSMUST00000064190 Kiaa1109A2AAE1 5005 aa4.26□□□□□ -1.73
Rai1-201ENSMUST00000064190 Hmcn2A2AJ76 5100 aa4.11□□□□□ -1.75
Rai1-201ENSMUST00000064190 ZanO88799 5376 aa4.09□□□□□ -1.76
Rai1-201ENSMUST00000064190 Krtap6-3A0A087WQL6 57 aa4.06□□□□□ -1.76
Rai1-201ENSMUST00000064190 Abca13Q5SSE9 5034 aa4□□□□□ -1.77
Rai1-201ENSMUST00000064190 Ubr4A2AN08 5180 aa3.95□□□□□ -1.78
Rai1-201ENSMUST00000064190 4932415D10RikA0A1W2P6U8 4986 aa3.9□□□□□ -1.78
Rai1-201ENSMUST00000064190 Muc5bE9Q5I3 4800 aa3.9□□□□□ -1.79
Rai1-201ENSMUST00000064190 Krtap20-2E9Q0A8 60 aa3.89□□□□□ -1.79
Rai1-201ENSMUST00000064190 Mt1P02802 61 aaKnown RBP3.82□□□□□ -1.8
Rai1-201ENSMUST00000064190 Fat4Q2PZL6 4981 aa3.81□□□□□ -1.8
Rai1-201ENSMUST00000064190 Rnf213E9Q555 5152 aaKnown RBP3.53□□□□□ -1.84
Rai1-201ENSMUST00000064190 ObscnA2AAJ9 8891 aaKnown RBP3.52□□□□□ -1.85
Rai1-201ENSMUST00000064190 Ush2AQ2QI47 5193 aa3.51□□□□□ -1.85
Rai1-201ENSMUST00000064190 Muc16A0A140LJ72 8478 aa3.5□□□□□ -1.85
Rai1-201ENSMUST00000064190 Gm11555B1AQ89 175 aa3.37□□□□□ -1.87
Rai1-201ENSMUST00000064190 SspoQ8CG65 4998 aa3.36□□□□□ -1.87
Rai1-201ENSMUST00000064190 Macf1Q9QXZ0 7354 aaKnown RBP3.31□□□□□ -1.88
Rai1-201ENSMUST00000064190 NebE9Q1W3 7152 aa3.3□□□□□ -1.88
Rai1-201ENSMUST00000064190 Phgr1Q8K0G7 91 aa3.22□□□□□ -1.89
Rai1-201ENSMUST00000064190 1110025L11RikO09048 78 aa3.2□□□□□ -1.9
Rai1-201ENSMUST00000064190 Krtap6-5Q925H3 78 aa3.2□□□□□ -1.9
Rai1-201ENSMUST00000064190 Muc19Q6PZE0 7524 aa3.2□□□□□ -1.9
Rai1-201ENSMUST00000064190 DstQ91ZU6 7393 aaKnown RBP3.15□□□□□ -1.9
Rai1-201ENSMUST00000064190 Gm10229O08631 77 aa3.15□□□□□ -1.91
Rai1-201ENSMUST00000064190 Eppk1Q8R0W0 6548 aa3.01□□□□□ -1.93
Rai1-201ENSMUST00000064190 Gm11568A2A4M2 211 aa2.99□□□□□ -1.93
Rai1-201ENSMUST00000064190 Krtap9-1Q64526 186 aa2.99□□□□□ -1.93
Rai1-201ENSMUST00000064190 Gm11559Q9D3H7 191 aa2.99□□□□□ -1.93
Rai1-201ENSMUST00000064190 Gm11567Q9D141 195 aa2.78□□□□□ -1.96
Rai1-201ENSMUST00000064190 Kmt2dQ6PDK2 5588 aa2.71□□□□□ -1.98
Rai1-201ENSMUST00000064190 Gpr98Q8VHN7 6298 aaKnown RBP2.53□□□□□ -2
Rai1-201ENSMUST00000064190 Gm11639A0A1D5RLM8 5808 aa2.5□□□□□ -2.01
Rai1-201ENSMUST00000064190 Krtap6-2O08884 159 aa2.43□□□□□ -2.02
Rai1-201ENSMUST00000064190 Krtap5-2Q9D5Z7 189 aa2.22□□□□□ -2.05
Rai1-201ENSMUST00000064190 Hmcn1D3YXG0 5634 aa2.18□□□□□ -2.06
Rai1-201ENSMUST00000064190 Krtap21-1Q925H4 128 aa2.17□□□□□ -2.06
Rai1-201ENSMUST00000064190 Gm4553A0A1B0GSA9 284 aa2.11□□□□□ -2.07
Rai1-201ENSMUST00000064190 Gm2431E9Q8S1 172 aa2.09□□□□□ -2.08
Rai1-201ENSMUST00000064190 AhnakE9Q616 5656 aaKnown RBP1.96□□□□□ -2.1
Rai1-201ENSMUST00000064190 A030005L19RikA0A1Y7VIU2 113 aa1.94□□□□□ -2.1
Rai1-201ENSMUST00000064190 Gm10153A0A1B0GRL1 320 aa1.93□□□□□ -2.1
Rai1-201ENSMUST00000064190 A0A1Y7VLE6 161 aa1.8□□□□□ -2.12
Rai1-201ENSMUST00000064190 Gm45337A0A1B0GS71 263 aa1.79□□□□□ -2.12
Rai1-201ENSMUST00000064190 Gm40460A0A1B0GR10 244 aa1.75□□□□□ -2.13
Rai1-201ENSMUST00000064190 Gm7579A0A1B0GRJ4 243 aa1.75□□□□□ -2.13
Rai1-201ENSMUST00000064190 Krtap5-5Q2TA51 241 aa1.75□□□□□ -2.13
Rai1-201ENSMUST00000064190 Krtap5-4Q62220 223 aa1.75□□□□□ -2.13
Rai1-201ENSMUST00000064190 A0A1Y7VJH8 109 aa1.7□□□□□ -2.14
Rai1-201ENSMUST00000064190 Gm39115A0A1B0GSH7 232 aa1.6□□□□□ -2.15
Rai1-201ENSMUST00000064190 A030003K21RikA0A1Y7VIM3 128 aa1.58□□□□□ -2.16
Rai1-201ENSMUST00000064190 A0A1Y7VJ07 166 aa1.51□□□□□ -2.17
Rai1-201ENSMUST00000064190 Krtap28-10A0A1Y7VP58 119 aa1.47□□□□□ -2.17
Rai1-201ENSMUST00000064190 Gm7544A0A1Y7VJ58 118 aa1.46□□□□□ -2.18
Rai1-201ENSMUST00000064190 Gm6217A0A1Y7VJK9 128 aa1.45□□□□□ -2.18
Rai1-201ENSMUST00000064190 Krtap5-1Q64507 230 aa1.4□□□□□ -2.18
Rai1-201ENSMUST00000064190 A030005K14RikA0A1Y7VNY1 122 aa1.34□□□□□ -2.19
Rai1-201ENSMUST00000064190 Gm29735A0A1B0GT06 219 aa1.33□□□□□ -2.2
Rai1-201ENSMUST00000064190 Krtap28-13A0A087WQP5 138 aa1.32□□□□□ -2.2
Rai1-201ENSMUST00000064190 Gm45618A0A1B0GSA0 219 aa1.3□□□□□ -2.2
Rai1-201ENSMUST00000064190 A030014E15RikA0A1Y7VJV2 120 aa1.27□□□□□ -2.21
Rai1-201ENSMUST00000064190 A0A286YCP9 139 aa1.16□□□□□ -2.22
Rai1-201ENSMUST00000064190 Gm4559A4IF42 199 aa0.67□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 80.7 ms