RNA–Protein interactions for RNA: ENSMUST00000033540.5

Vbp1-201, Transcript of Prefoldin subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vbp1, Length 1,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1-201ENSMUST00000033540 Gm10337F7DEP7 55 aa4.49□□□□□ -1.69
Vbp1-201ENSMUST00000033540 H2al1mQ9DAD9 105 aa4.49□□□□□ -1.69
Vbp1-201ENSMUST00000033540 Gm11562A0PK51 136 aa4.48□□□□□ -1.69
Vbp1-201ENSMUST00000033540 Gm6358A0A087WPH4 74 aa4.45□□□□□ -1.7
Vbp1-201ENSMUST00000033540 Gm3880A0A1B0GSB3 72 aa4.44□□□□□ -1.7
Vbp1-201ENSMUST00000033540 Gm3646F6S692 53 aa4.44□□□□□ -1.7
Vbp1-201ENSMUST00000033540 Ndufs5Q99LY9 106 aa4.43□□□□□ -1.7
Vbp1-201ENSMUST00000033540 Gm11568A2A4M2 211 aa4.41□□□□□ -1.7
Vbp1-201ENSMUST00000033540 Krtap9-1Q64526 186 aa4.41□□□□□ -1.7
Vbp1-201ENSMUST00000033540 Krtap5-2Q9D5Z7 189 aa4.4□□□□□ -1.71
Vbp1-201ENSMUST00000033540 Krtap9-3Q3V2C1 136 aa4.35□□□□□ -1.71
Vbp1-201ENSMUST00000033540 Krtap5-1Q64507 230 aa4.32□□□□□ -1.72
Vbp1-201ENSMUST00000033540 Gm7579A0A1B0GRJ4 243 aa4.3□□□□□ -1.72
Vbp1-201ENSMUST00000033540 Mt2P02798 61 aa4.3□□□□□ -1.72
Vbp1-201ENSMUST00000033540 Gm12216A0A1W2P827 62 aa4.27□□□□□ -1.73
Vbp1-201ENSMUST00000033540 Mdn1A2ANY6 5589 aaKnown RBP4.26□□□□□ -1.73
Vbp1-201ENSMUST00000033540 Camk2n1Q6QWF9 78 aa4.24□□□□□ -1.73
Vbp1-201ENSMUST00000033540 Gm4559A4IF42 199 aa4.23□□□□□ -1.73
Vbp1-201ENSMUST00000033540 Gm10272F7CZ33 110 aa4.23□□□□□ -1.73
Vbp1-201ENSMUST00000033540 Romo1P60603 79 aa4.23□□□□□ -1.73
Vbp1-201ENSMUST00000033540 Syne2Q6ZWQ0 6874 aaKnown RBP4.21□□□□□ -1.74
Vbp1-201ENSMUST00000033540 Krtap8-1O08633 61 aa4.19□□□□□ -1.74
Vbp1-201ENSMUST00000033540 Krtap19-9bQ99NG9 58 aa4.16□□□□□ -1.74
Vbp1-201ENSMUST00000033540 SvipQ3UZP4 77 aa4.12□□□□□ -1.75
Vbp1-201ENSMUST00000033540 Gm11564A2A4L9 201 aa4.1□□□□□ -1.75
Vbp1-201ENSMUST00000033540 Krtap22-2J3QNX6 67 aa4.09□□□□□ -1.75
Vbp1-201ENSMUST00000033540 Mt3P28184 68 aa4.02□□□□□ -1.77
Vbp1-201ENSMUST00000033540 Mt4P47945 62 aa3.95□□□□□ -1.78
Vbp1-201ENSMUST00000033540 Gm40193A0A1B0GT39 78 aa3.86□□□□□ -1.79
Vbp1-201ENSMUST00000033540 Krtap7-1Q9D3I6 87 aa3.86□□□□□ -1.79
Vbp1-201ENSMUST00000033540 Fsip2A2ARZ3 6995 aa3.81□□□□□ -1.8
Vbp1-201ENSMUST00000033540 Tnp1P10856 55 aa3.8□□□□□ -1.8
Vbp1-201ENSMUST00000033540 Krtap5-5Q2TA51 241 aa3.8□□□□□ -1.8
Vbp1-201ENSMUST00000033540 Krtap6-3A0A087WQL6 57 aa3.73□□□□□ -1.81
Vbp1-201ENSMUST00000033540 Sprr2kO70562 68 aa3.73□□□□□ -1.81
Vbp1-201ENSMUST00000033540 2310046K23RikA0A0A6YVW6 87 aa3.63□□□□□ -1.83
Vbp1-201ENSMUST00000033540 Mp68P56379 58 aa3.59□□□□□ -1.83
Vbp1-201ENSMUST00000033540 Syne1Q6ZWR6 8799 aa3.56□□□□□ -1.84
Vbp1-201ENSMUST00000033540 Lce3bQ9CQM7 98 aa3.51□□□□□ -1.85
Vbp1-201ENSMUST00000033540 Sprr2gO70558 76 aa3.5□□□□□ -1.85
Vbp1-201ENSMUST00000033540 Gm11938Q9D3H4 131 aa3.48□□□□□ -1.85
Vbp1-201ENSMUST00000033540 Krtap20-2E9Q0A8 60 aa3.44□□□□□ -1.86
Vbp1-201ENSMUST00000033540 Sprr2iO70560 76 aa3.42□□□□□ -1.86
Vbp1-201ENSMUST00000033540 Kmt2dQ6PDK2 5588 aa3.37□□□□□ -1.87
Vbp1-201ENSMUST00000033540 Gm40460A0A1B0GR10 244 aa3.37□□□□□ -1.87
Vbp1-201ENSMUST00000033540 Sprr2dO70555 85 aa3.29□□□□□ -1.88
Vbp1-201ENSMUST00000033540 Mt1P02802 61 aaKnown RBP3.27□□□□□ -1.89
Vbp1-201ENSMUST00000033540 Lce3cQ91V05 98 aa3.22□□□□□ -1.89
Vbp1-201ENSMUST00000033540 Krtap19-4Q925H7 84 aa3.22□□□□□ -1.89
Vbp1-201ENSMUST00000033540 Gm20538F6Z9R1 75 aa3.21□□□□□ -1.9
Vbp1-201ENSMUST00000033540 Lce3dE9Q8V1 98 aa3.17□□□□□ -1.9
Vbp1-201ENSMUST00000033540 Lce3eF8VQJ0 98 aa3.14□□□□□ -1.91
Vbp1-201ENSMUST00000033540 Lce3fQ6PAI4 98 aa3.14□□□□□ -1.91
Vbp1-201ENSMUST00000033540 ObscnA2AAJ9 8891 aaKnown RBP3.12□□□□□ -1.91
Vbp1-201ENSMUST00000033540 Macf1Q9QXZ0 7354 aaKnown RBP3.11□□□□□ -1.91
Vbp1-201ENSMUST00000033540 Eppk1Q8R0W0 6548 aa3.07□□□□□ -1.92
Vbp1-201ENSMUST00000033540 Krtap6-5Q925H3 78 aa3.04□□□□□ -1.92
Vbp1-201ENSMUST00000033540 4933428G20RikQ9D3X4 101 aa3.02□□□□□ -1.93
Vbp1-201ENSMUST00000033540 Lce3aQ497I5 98 aa3□□□□□ -1.93
Vbp1-201ENSMUST00000033540 Hmcn1D3YXG0 5634 aa2.98□□□□□ -1.93
Vbp1-201ENSMUST00000033540 Ndufaf8A2AMZ4 74 aa2.98□□□□□ -1.93
Vbp1-201ENSMUST00000033540 Gm11639A0A1D5RLM8 5808 aa2.88□□□□□ -1.95
Vbp1-201ENSMUST00000033540 Sprr2hO70559 108 aa2.84□□□□□ -1.95
Vbp1-201ENSMUST00000033540 Muc19Q6PZE0 7524 aa2.8□□□□□ -1.96
Vbp1-201ENSMUST00000033540 DstQ91ZU6 7393 aaKnown RBP2.72□□□□□ -1.97
Vbp1-201ENSMUST00000033540 Gpr98Q8VHN7 6298 aaKnown RBP2.71□□□□□ -1.98
Vbp1-201ENSMUST00000033540 Sprr2fO70557 76 aa2.62□□□□□ -1.99
Vbp1-201ENSMUST00000033540 Sprr2eO70556 76 aa2.61□□□□□ -1.99
Vbp1-201ENSMUST00000033540 Krtap4-16Q91W93 202 aa2.61□□□□□ -1.99
Vbp1-201ENSMUST00000033540 Gm10024A0A0A0MQA4 119 aa2.6□□□□□ -1.99
Vbp1-201ENSMUST00000033540 NebE9Q1W3 7152 aa2.59□□□□□ -2
Vbp1-201ENSMUST00000033540 AhnakE9Q616 5656 aaKnown RBP2.55□□□□□ -2
Vbp1-201ENSMUST00000033540 Gm10229O08631 77 aa2.49□□□□□ -2.01
Vbp1-201ENSMUST00000033540 Krtap6-2O08884 159 aa2.46□□□□□ -2.02
Vbp1-201ENSMUST00000033540 1110025L11RikO09048 78 aa2.41□□□□□ -2.02
Vbp1-201ENSMUST00000033540 Gm9112A2AI92 75 aa2.4□□□□□ -2.02
Vbp1-201ENSMUST00000033540 Muc16A0A140LJ72 8478 aa2.3□□□□□ -2.04
Vbp1-201ENSMUST00000033540 Sprr2bO70554 98 aa2.02□□□□□ -2.09
Vbp1-201ENSMUST00000033540 Krtap21-1Q925H4 128 aa1.97□□□□□ -2.09
Vbp1-201ENSMUST00000033540 Phgr1Q8K0G7 91 aa1.7□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 194.3 ms