RNA–Protein interactions for RNA: ENSMUST00000016781.6

Ift27-201, Transcript of Intraflagellar transport protein 27 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift27, Length 1,012 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27-201ENSMUST00000016781 Gm40460A0A1B0GR10 244 aa4.69□□□□□ -1.66
Ift27-201ENSMUST00000016781 Gm7579A0A1B0GRJ4 243 aa4.69□□□□□ -1.66
Ift27-201ENSMUST00000016781 Gm10153A0A1B0GRL1 320 aa4.69□□□□□ -1.66
Ift27-201ENSMUST00000016781 Krtap5-5Q2TA51 241 aa4.69□□□□□ -1.66
Ift27-201ENSMUST00000016781 Krtap5-4Q62220 223 aa4.69□□□□□ -1.66
Ift27-201ENSMUST00000016781 Krtap7-1Q9D3I6 87 aa4.66□□□□□ -1.66
Ift27-201ENSMUST00000016781 Cdc42se1Q8BHL7 80 aa4.64□□□□□ -1.67
Ift27-201ENSMUST00000016781 Krtap4-16Q91W93 202 aa4.64□□□□□ -1.67
Ift27-201ENSMUST00000016781 Uqcr11Q9CPX8 56 aa4.64□□□□□ -1.67
Ift27-201ENSMUST00000016781 Pet100P0DJE0 76 aa4.62□□□□□ -1.67
Ift27-201ENSMUST00000016781 Gm10197F6QEY5 67 aa4.61□□□□□ -1.67
Ift27-201ENSMUST00000016781 Gm11938Q9D3H4 131 aa4.59□□□□□ -1.67
Ift27-201ENSMUST00000016781 Mt1P02802 61 aaKnown RBP4.56□□□□□ -1.68
Ift27-201ENSMUST00000016781 Phxr4P15974 95 aa4.56□□□□□ -1.68
Ift27-201ENSMUST00000016781 H2al1bA0A087WP11 105 aa4.55□□□□□ -1.68
Ift27-201ENSMUST00000016781 Tmem258P61166 79 aa4.53□□□□□ -1.68
Ift27-201ENSMUST00000016781 Sprr2fO70557 76 aa4.5□□□□□ -1.69
Ift27-201ENSMUST00000016781 Gm45618A0A1B0GSA0 219 aa4.48□□□□□ -1.69
Ift27-201ENSMUST00000016781 Ndufb1P0DN34 57 aa4.48□□□□□ -1.69
Ift27-201ENSMUST00000016781 Gm19935A0A1B0GSF9 52 aa4.47□□□□□ -1.69
Ift27-201ENSMUST00000016781 AhnakE9Q616 5656 aaKnown RBP4.42□□□□□ -1.7
Ift27-201ENSMUST00000016781 Brk1Q91VR8 75 aa4.39□□□□□ -1.71
Ift27-201ENSMUST00000016781 Lce3cQ91V05 98 aa4.34□□□□□ -1.71
Ift27-201ENSMUST00000016781 Mt3P28184 68 aa4.29□□□□□ -1.72
Ift27-201ENSMUST00000016781 SmcpP15265 143 aa4.28□□□□□ -1.72
Ift27-201ENSMUST00000016781 Gm3880A0A1B0GSB3 72 aa4.27□□□□□ -1.73
Ift27-201ENSMUST00000016781 Lce3dE9Q8V1 98 aa4.26□□□□□ -1.73
Ift27-201ENSMUST00000016781 4933415A04RikQ9D443 101 aa4.17□□□□□ -1.74
Ift27-201ENSMUST00000016781 Rps28P62858 69 aaKnown RBP4.14□□□□□ -1.75
Ift27-201ENSMUST00000016781 H2al1kJ3QP08 105 aa4.12□□□□□ -1.75
Ift27-201ENSMUST00000016781 H2al1mQ9DAD9 105 aa4.1□□□□□ -1.75
Ift27-201ENSMUST00000016781 Lce3eF8VQJ0 98 aa4.07□□□□□ -1.76
Ift27-201ENSMUST00000016781 Lce3fQ6PAI4 98 aa4.07□□□□□ -1.76
Ift27-201ENSMUST00000016781 ObscnA2AAJ9 8891 aaKnown RBP4.06□□□□□ -1.76
Ift27-201ENSMUST00000016781 Gm12216A0A1W2P827 62 aa4.02□□□□□ -1.77
Ift27-201ENSMUST00000016781 Gm10100J3QK64 120 aa4□□□□□ -1.77
Ift27-201ENSMUST00000016781 A0A1Y7VLE6 161 aa3.99□□□□□ -1.77
Ift27-201ENSMUST00000016781 Tnp1P10856 55 aa3.96□□□□□ -1.78
Ift27-201ENSMUST00000016781 4933428G20RikQ9D3X4 101 aa3.95□□□□□ -1.78
Ift27-201ENSMUST00000016781 Ndufs5Q99LY9 106 aa3.93□□□□□ -1.78
Ift27-201ENSMUST00000016781 Lce3aQ497I5 98 aa3.9□□□□□ -1.79
Ift27-201ENSMUST00000016781 Romo1P60603 79 aa3.89□□□□□ -1.79
Ift27-201ENSMUST00000016781 Sox16Q62247 57 aa3.8□□□□□ -1.8
Ift27-201ENSMUST00000016781 Sprr2eO70556 76 aa3.79□□□□□ -1.8
Ift27-201ENSMUST00000016781 Gm3646F6S692 53 aa3.77□□□□□ -1.81
Ift27-201ENSMUST00000016781 Sprr2hO70559 108 aa3.62□□□□□ -1.83
Ift27-201ENSMUST00000016781 Gm10024A0A0A0MQA4 119 aa3.59□□□□□ -1.83
Ift27-201ENSMUST00000016781 Gm40193A0A1B0GT39 78 aa3.55□□□□□ -1.84
Ift27-201ENSMUST00000016781 Sprr2dO70555 85 aa3.5□□□□□ -1.85
Ift27-201ENSMUST00000016781 Muc16A0A140LJ72 8478 aa3.49□□□□□ -1.85
Ift27-201ENSMUST00000016781 A0A1Y7VJ07 166 aa3.44□□□□□ -1.86
Ift27-201ENSMUST00000016781 Gm29735A0A1B0GT06 219 aa3.42□□□□□ -1.86
Ift27-201ENSMUST00000016781 Gm10337F7DEP7 55 aa3.42□□□□□ -1.86
Ift27-201ENSMUST00000016781 Pcp4P63054 62 aa3.34□□□□□ -1.87
Ift27-201ENSMUST00000016781 Gm10142J3KMP7 120 aa3.33□□□□□ -1.88
Ift27-201ENSMUST00000016781 SvipQ3UZP4 77 aa3.23□□□□□ -1.89
Ift27-201ENSMUST00000016781 Gm11567Q9D141 195 aa3.21□□□□□ -1.9
Ift27-201ENSMUST00000016781 Krtap28-10A0A1Y7VP58 119 aa3.18□□□□□ -1.9
Ift27-201ENSMUST00000016781 1110025L11RikO09048 78 aa3.18□□□□□ -1.9
Ift27-201ENSMUST00000016781 Krtap6-5Q925H3 78 aa3.18□□□□□ -1.9
Ift27-201ENSMUST00000016781 Mp68P56379 58 aa3.06□□□□□ -1.92
Ift27-201ENSMUST00000016781 Krtap28-13A0A087WQP5 138 aa3.03□□□□□ -1.92
Ift27-201ENSMUST00000016781 A030003K21RikA0A1Y7VIM3 128 aa2.97□□□□□ -1.93
Ift27-201ENSMUST00000016781 A030005K14RikA0A1Y7VNY1 122 aa2.94□□□□□ -1.94
Ift27-201ENSMUST00000016781 Gm20538F6Z9R1 75 aa2.93□□□□□ -1.94
Ift27-201ENSMUST00000016781 Gm10229O08631 77 aa2.88□□□□□ -1.95
Ift27-201ENSMUST00000016781 Krtap5-1Q64507 230 aa2.84□□□□□ -1.95
Ift27-201ENSMUST00000016781 Gm7544A0A1Y7VJ58 118 aa2.83□□□□□ -1.96
Ift27-201ENSMUST00000016781 Sprr2bO70554 98 aa2.82□□□□□ -1.96
Ift27-201ENSMUST00000016781 Krtap31-2Q8CAY5 177 aa2.76□□□□□ -1.97
Ift27-201ENSMUST00000016781 Krtap31-1Q9D644 177 aa2.76□□□□□ -1.97
Ift27-201ENSMUST00000016781 Krtap6-2O08884 159 aa2.63□□□□□ -1.99
Ift27-201ENSMUST00000016781 A030014E15RikA0A1Y7VJV2 120 aa2.55□□□□□ -2
Ift27-201ENSMUST00000016781 Krtap21-1Q925H4 128 aa2.54□□□□□ -2
Ift27-201ENSMUST00000016781 A0A286YCP9 139 aa2.37□□□□□ -2.03
Ift27-201ENSMUST00000016781 Gm6217A0A1Y7VJK9 128 aa2.36□□□□□ -2.03
Ift27-201ENSMUST00000016781 Ndufaf8A2AMZ4 74 aa2.12□□□□□ -2.07
Ift27-201ENSMUST00000016781 Phgr1Q8K0G7 91 aa2.09□□□□□ -2.07
Ift27-201ENSMUST00000016781 Gm4559A4IF42 199 aa2□□□□□ -2.09
Ift27-201ENSMUST00000016781 Gm9112A2AI92 75 aa1.84□□□□□ -2.11
Retrieved 80 of 22,080 RNA–protein pairs in 110.2 ms