RNA–Protein interactions for RNA: ENSMUST00000190780.6

Fn1-217, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,694 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-217ENSMUST00000190780 Krtap1-5A2A590 122 aa4.95□□□□□ -1.62
Fn1-217ENSMUST00000190780 Hspg2Q05793 3707 aaKnown RBP4.95□□□□□ -1.62
Fn1-217ENSMUST00000190780 Lce3dE9Q8V1 98 aa4.91□□□□□ -1.62
Fn1-217ENSMUST00000190780 Lce3eF8VQJ0 98 aa4.89□□□□□ -1.63
Fn1-217ENSMUST00000190780 Lce3fQ6PAI4 98 aa4.89□□□□□ -1.63
Fn1-217ENSMUST00000190780 Xirp2Q4U4S6 3784 aa4.88□□□□□ -1.63
Fn1-217ENSMUST00000190780 Gm10272F7CZ33 110 aa4.86□□□□□ -1.63
Fn1-217ENSMUST00000190780 Krtap19-3Q925H6 87 aa4.86□□□□□ -1.63
Fn1-217ENSMUST00000190780 Sprr2eO70556 76 aa4.83□□□□□ -1.64
Fn1-217ENSMUST00000190780 Sprr2a3Q4KL71 83 aa4.81□□□□□ -1.64
Fn1-217ENSMUST00000190780 Sprr2a1Q9CQK8 83 aa4.81□□□□□ -1.64
Fn1-217ENSMUST00000190780 BsnO88737 3942 aa4.8□□□□□ -1.64
Fn1-217ENSMUST00000190780 Krtap9-5A2A5X3 358 aa4.8□□□□□ -1.64
Fn1-217ENSMUST00000190780 Lce3aQ497I5 98 aa4.75□□□□□ -1.65
Fn1-217ENSMUST00000190780 Muc6Q80T03 2850 aa4.75□□□□□ -1.65
Fn1-217ENSMUST00000190780 Lce1bQ9D149 137 aa4.73□□□□□ -1.65
Fn1-217ENSMUST00000190780 Krtap16-3Q8C1I6 86 aa4.69□□□□□ -1.66
Fn1-217ENSMUST00000190780 Lce1fB9EJP6 147 aa4.69□□□□□ -1.66
Fn1-217ENSMUST00000190780 Gm10100J3QK64 120 aa4.69□□□□□ -1.66
Fn1-217ENSMUST00000190780 Lce1cQ9D1C5 147 aa4.69□□□□□ -1.66
Fn1-217ENSMUST00000190780 Lce1lQ9D1G7 135 aa4.69□□□□□ -1.66
Fn1-217ENSMUST00000190780 Lce1dQ9D731 133 aa4.69□□□□□ -1.66
Fn1-217ENSMUST00000190780 Krtap3-2Q9D638 99 aa4.67□□□□□ -1.66
Fn1-217ENSMUST00000190780 Krtap3-3Q9D7P0 99 aa4.67□□□□□ -1.66
Fn1-217ENSMUST00000190780 Gm10024A0A0A0MQA4 119 aa4.61□□□□□ -1.67
Fn1-217ENSMUST00000190780 Krtap4-2B1AQ85 167 aa4.59□□□□□ -1.67
Fn1-217ENSMUST00000190780 Gm10142J3KMP7 120 aa4.56□□□□□ -1.68
Fn1-217ENSMUST00000190780 Lce1eQ9D139 143 aa4.55□□□□□ -1.68
Fn1-217ENSMUST00000190780 Mt4P47945 62 aa4.55□□□□□ -1.68
Fn1-217ENSMUST00000190780 Prm1P02319 51 aa4.53□□□□□ -1.68
Fn1-217ENSMUST00000190780 Dnah14A0A140LIJ4 4489 aa4.51□□□□□ -1.69
Fn1-217ENSMUST00000190780 Krtap22-2J3QNX6 67 aa4.5□□□□□ -1.69
Fn1-217ENSMUST00000190780 Sprr2hO70559 108 aa4.5□□□□□ -1.69
Fn1-217ENSMUST00000190780 Dnah7bL7N1Y0 4068 aa4.46□□□□□ -1.7
Fn1-217ENSMUST00000190780 TnxbO35452 4006 aa4.45□□□□□ -1.7
Fn1-217ENSMUST00000190780 Vps13bQ80TY5 3993 aa4.45□□□□□ -1.7
Fn1-217ENSMUST00000190780 Gm11569B1AQB1 180 aa4.44□□□□□ -1.7
Fn1-217ENSMUST00000190780 Krtap19-4Q925H7 84 aa4.41□□□□□ -1.7
Fn1-217ENSMUST00000190780 Dnah10D3YYQ8 4591 aa4.41□□□□□ -1.7
Fn1-217ENSMUST00000190780 Mt2P02798 61 aa4.41□□□□□ -1.7
Fn1-217ENSMUST00000190780 Krtap19-2Q925I0 141 aa4.37□□□□□ -1.71
Fn1-217ENSMUST00000190780 Krtap4-6Q3V4B7 195 aa4.31□□□□□ -1.72
Fn1-217ENSMUST00000190780 Kmt2aP55200 3966 aa4.31□□□□□ -1.72
Fn1-217ENSMUST00000190780 Gm7735D3YX18 52 aa4.3□□□□□ -1.72
Fn1-217ENSMUST00000190780 Dnah6E9Q0B6 4144 aa4.3□□□□□ -1.72
Fn1-217ENSMUST00000190780 Sprr2dO70555 85 aa4.27□□□□□ -1.73
Fn1-217ENSMUST00000190780 Dnah3Q8BW94 4083 aa4.27□□□□□ -1.73
Fn1-217ENSMUST00000190780 Dnah5Q8VHE6 4621 aa4.25□□□□□ -1.73
Fn1-217ENSMUST00000190780 PrkdcP97313 4128 aa4.25□□□□□ -1.73
Fn1-217ENSMUST00000190780 Fat1A0A1L1SQU7 4645 aa4.22□□□□□ -1.73
Fn1-217ENSMUST00000190780 Vps13dB1ART2 4390 aa4.22□□□□□ -1.73
Fn1-217ENSMUST00000190780 Dnah11E9Q7N9 4488 aa4.19□□□□□ -1.74
Fn1-217ENSMUST00000190780 Dnah1E9Q8T7 4250 aa4.19□□□□□ -1.74
Fn1-217ENSMUST00000190780 Dnah7cA0A087WR13 4024 aa4.19□□□□□ -1.74
Fn1-217ENSMUST00000190780 Dnah17Q69Z23 4481 aa4.18□□□□□ -1.74
Fn1-217ENSMUST00000190780 Krtap9-3Q3V2C1 136 aa4.18□□□□□ -1.74
Fn1-217ENSMUST00000190780 Dnah7aE9Q0T8 4024 aa4.15□□□□□ -1.75
Fn1-217ENSMUST00000190780 Gm10061D3Z714 54 aa4.15□□□□□ -1.75
Fn1-217ENSMUST00000190780 Krtap17-1A2A5X6 109 aa4.14□□□□□ -1.75
Fn1-217ENSMUST00000190780 Dnah2P0C6F1 4456 aa4.13□□□□□ -1.75
Fn1-217ENSMUST00000190780 Gm11596B1AQB0 205 aa4.12□□□□□ -1.75
Fn1-217ENSMUST00000190780 PlecQ9QXS1 4691 aaKnown RBP4.11□□□□□ -1.75
Fn1-217ENSMUST00000190780 Gm9789Q8BIG3 52 aa4.11□□□□□ -1.75
Fn1-217ENSMUST00000190780 Krtap31-2Q8CAY5 177 aa4.1□□□□□ -1.75
Fn1-217ENSMUST00000190780 Sprr2bO70554 98 aa4.1□□□□□ -1.75
Fn1-217ENSMUST00000190780 ApobE9Q414 4505 aa4.09□□□□□ -1.75
Fn1-217ENSMUST00000190780 Krtap1-3A2A588 173 aa4.09□□□□□ -1.75
Fn1-217ENSMUST00000190780 Fras1Q80T14 4010 aa4.09□□□□□ -1.76
Fn1-217ENSMUST00000190780 2300003K06RikA2A4M0 262 aa4.08□□□□□ -1.76
Fn1-217ENSMUST00000190780 Krtap4-7Q9D732 168 aa4.08□□□□□ -1.76
Fn1-217ENSMUST00000190780 Dync2h1Q45VK7 4306 aa4.08□□□□□ -1.76
Fn1-217ENSMUST00000190780 Krtap4-1Q3UUY3 169 aa4.07□□□□□ -1.76
Fn1-217ENSMUST00000190780 Stard9Q80TF6 4561 aa4.06□□□□□ -1.76
Fn1-217ENSMUST00000190780 Lce1a1Q9CQH5 143 aa4.04□□□□□ -1.76
Fn1-217ENSMUST00000190780 Lce1a2Q9D1K4 149 aa4.04□□□□□ -1.76
Fn1-217ENSMUST00000190780 Gm11564A2A4L9 201 aa4.01□□□□□ -1.77
Fn1-217ENSMUST00000190780 Gm11563B1AQ90 168 aa4.01□□□□□ -1.77
Fn1-217ENSMUST00000190780 Gm11595B1AQA7 289 aa4.01□□□□□ -1.77
Fn1-217ENSMUST00000190780 Krtap4-8B1AQA8 209 aa4.01□□□□□ -1.77
Fn1-217ENSMUST00000190780 Dnah9B1AR51 4484 aa4□□□□□ -1.77
Fn1-217ENSMUST00000190780 Krtap19-1Q925H2 87 aa3.98□□□□□ -1.77
Fn1-217ENSMUST00000190780 Krtap4-9B1AQA9 244 aa3.97□□□□□ -1.77
Fn1-217ENSMUST00000190780 Pkd1O08852 4293 aa3.96□□□□□ -1.78
Fn1-217ENSMUST00000190780 SacsQ9JLC8 4582 aa3.95□□□□□ -1.78
Fn1-217ENSMUST00000190780 Krtap4-13Q9D7P3 165 aa3.94□□□□□ -1.78
Fn1-217ENSMUST00000190780 Dync1h1Q9JHU4 4644 aaKnown RBP3.93□□□□□ -1.78
Fn1-217ENSMUST00000190780 Mycbp2Q7TPH6 4711 aa3.92□□□□□ -1.78
Fn1-217ENSMUST00000190780 Hectd4E9Q2E4 4418 aa3.88□□□□□ -1.79
Fn1-217ENSMUST00000190780 Dnhd1D3Z2X2 4750 aa3.84□□□□□ -1.8
Fn1-217ENSMUST00000190780 Lrp1Q91ZX7 4545 aaKnown RBP3.81□□□□□ -1.8
Fn1-217ENSMUST00000190780 Lce1kJ3QP15 125 aa3.77□□□□□ -1.81
Fn1-217ENSMUST00000190780 Lrp1bQ9JI18 4599 aa3.76□□□□□ -1.81
Fn1-217ENSMUST00000190780 Pkhd1E9PZ36 4059 aa3.74□□□□□ -1.81
Fn1-217ENSMUST00000190780 Fat2Q5F226 4351 aa3.73□□□□□ -1.81
Fn1-217ENSMUST00000190780 Ryr3A2AGL3 4863 aa3.72□□□□□ -1.81
Fn1-217ENSMUST00000190780 Gm11562A0PK51 136 aa3.72□□□□□ -1.81
Fn1-217ENSMUST00000190780 Gm11554B1AQB2 190 aa3.71□□□□□ -1.82
Fn1-217ENSMUST00000190780 Krtap31-1Q9D644 177 aa3.71□□□□□ -1.82
Fn1-217ENSMUST00000190780 Mt3P28184 68 aa3.7□□□□□ -1.82
Fn1-217ENSMUST00000190780 Fat3Q8BNA6 4555 aa3.7□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 519.7 ms