RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Sprr2a3Q4KL71 83 aa5.25□□□□□ -1.57
Col6a3-208ENSMUST00000188587 Sprr2a1Q9CQK8 83 aa5.25□□□□□ -1.57
Col6a3-208ENSMUST00000188587 Krtap19-9bQ99NG9 58 aa5.24□□□□□ -1.57
Col6a3-208ENSMUST00000188587 Dnah14A0A140LIJ4 4489 aa5.2□□□□□ -1.58
Col6a3-208ENSMUST00000188587 LorP18165 486 aa5.17□□□□□ -1.58
Col6a3-208ENSMUST00000188587 Krtap1-4Q3V2D6 188 aa5.15□□□□□ -1.58
Col6a3-208ENSMUST00000188587 Dnah10D3YYQ8 4591 aa5.1□□□□□ -1.59
Col6a3-208ENSMUST00000188587 Fras1Q80T14 4010 aa5.1□□□□□ -1.59
Col6a3-208ENSMUST00000188587 Krtap12-1Q9Z287 130 aa5.09□□□□□ -1.59
Col6a3-208ENSMUST00000188587 Dnah1E9Q8T7 4250 aa5.09□□□□□ -1.6
Col6a3-208ENSMUST00000188587 Gm19402J3QJV4 266 aa5.08□□□□□ -1.6
Col6a3-208ENSMUST00000188587 Vps13dB1ART2 4390 aa4.95□□□□□ -1.62
Col6a3-208ENSMUST00000188587 Dync2h1Q45VK7 4306 aa4.95□□□□□ -1.62
Col6a3-208ENSMUST00000188587 Lce3bQ9CQM7 98 aa4.94□□□□□ -1.62
Col6a3-208ENSMUST00000188587 Dnah2P0C6F1 4456 aa4.94□□□□□ -1.62
Col6a3-208ENSMUST00000188587 Dnah11E9Q7N9 4488 aa4.9□□□□□ -1.62
Col6a3-208ENSMUST00000188587 Lce3cQ91V05 98 aa4.86□□□□□ -1.63
Col6a3-208ENSMUST00000188587 2310046K23RikA0A0A6YVW6 87 aa4.84□□□□□ -1.63
Col6a3-208ENSMUST00000188587 Lce1mQ9CR91 182 aa4.8□□□□□ -1.64
Col6a3-208ENSMUST00000188587 Dnah17Q69Z23 4481 aa4.78□□□□□ -1.64
Col6a3-208ENSMUST00000188587 Pkhd1E9PZ36 4059 aa4.77□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Gm10100J3QK64 120 aa4.76□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Dnah5Q8VHE6 4621 aa4.75□□□□□ -1.65
Col6a3-208ENSMUST00000188587 ApobE9Q414 4505 aa4.74□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Gm10272F7CZ33 110 aa4.74□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Stard9Q80TF6 4561 aa4.74□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Hectd4E9Q2E4 4418 aa4.71□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Lce3eF8VQJ0 98 aa4.71□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Sprr2iO70560 76 aa4.71□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Lce3fQ6PAI4 98 aa4.71□□□□□ -1.65
Col6a3-208ENSMUST00000188587 Dnah9B1AR51 4484 aa4.7□□□□□ -1.66
Col6a3-208ENSMUST00000188587 Pkd1O08852 4293 aa4.7□□□□□ -1.66
Col6a3-208ENSMUST00000188587 Lce3dE9Q8V1 98 aa4.69□□□□□ -1.66
Col6a3-208ENSMUST00000188587 Krtap9-5A2A5X3 358 aa4.65□□□□□ -1.66
Col6a3-208ENSMUST00000188587 Gm10142J3KMP7 120 aa4.62□□□□□ -1.67
Col6a3-208ENSMUST00000188587 Fat2Q5F226 4351 aa4.58□□□□□ -1.68
Col6a3-208ENSMUST00000188587 Pkhd1l1Q80ZA4 4249 aa4.57□□□□□ -1.68
Col6a3-208ENSMUST00000188587 Gm38119A0A0A6YX29 146 aa4.57□□□□□ -1.68
Col6a3-208ENSMUST00000188587 Lce3aQ497I5 98 aa4.56□□□□□ -1.68
Col6a3-208ENSMUST00000188587 Krtap16-3Q8C1I6 86 aa4.55□□□□□ -1.68
Col6a3-208ENSMUST00000188587 Sprr2fO70557 76 aa4.55□□□□□ -1.68
Col6a3-208ENSMUST00000188587 Lce1jD3YUU5 139 aa4.5□□□□□ -1.69
Col6a3-208ENSMUST00000188587 Lce1gQ9D195 139 aa4.5□□□□□ -1.69
Col6a3-208ENSMUST00000188587 Lce1iQ9D6P5 149 aa4.5□□□□□ -1.69
Col6a3-208ENSMUST00000188587 Lce1hQ9D6R3 140 aa4.5□□□□□ -1.69
Col6a3-208ENSMUST00000188587 Krtap19-3Q925H6 87 aa4.46□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Mycbp2Q7TPH6 4711 aa4.43□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Krtap22-2J3QNX6 67 aa4.42□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Mt2P02798 61 aa4.42□□□□□ -1.7
Col6a3-208ENSMUST00000188587 PlecQ9QXS1 4691 aaKnown RBP4.42□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Prm1P02319 51 aa4.42□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Fat1A0A1L1SQU7 4645 aa4.41□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Lrp1bQ9JI18 4599 aa4.41□□□□□ -1.7
Col6a3-208ENSMUST00000188587 Lrp1Q91ZX7 4545 aaKnown RBP4.39□□□□□ -1.71
Col6a3-208ENSMUST00000188587 Gm10024A0A0A0MQA4 119 aa4.39□□□□□ -1.71
Col6a3-208ENSMUST00000188587 Lce1bQ9D149 137 aa4.39□□□□□ -1.71
Col6a3-208ENSMUST00000188587 Fat3Q8BNA6 4555 aa4.38□□□□□ -1.71
Col6a3-208ENSMUST00000188587 Sprr2eO70556 76 aa4.33□□□□□ -1.72
Col6a3-208ENSMUST00000188587 Lce1fB9EJP6 147 aa4.32□□□□□ -1.72
Col6a3-208ENSMUST00000188587 Lce1cQ9D1C5 147 aa4.32□□□□□ -1.72
Col6a3-208ENSMUST00000188587 Lce1lQ9D1G7 135 aa4.32□□□□□ -1.72
Col6a3-208ENSMUST00000188587 Lce1dQ9D731 133 aa4.32□□□□□ -1.72
Col6a3-208ENSMUST00000188587 SacsQ9JLC8 4582 aa4.31□□□□□ -1.72
Col6a3-208ENSMUST00000188587 Lce1eQ9D139 143 aa4.27□□□□□ -1.73
Col6a3-208ENSMUST00000188587 Dync1h1Q9JHU4 4644 aaKnown RBP4.26□□□□□ -1.73
Col6a3-208ENSMUST00000188587 Krtap19-1Q925H2 87 aa4.25□□□□□ -1.73
Col6a3-208ENSMUST00000188587 Krtap19-2Q925I0 141 aa4.21□□□□□ -1.74
Col6a3-208ENSMUST00000188587 Gm7735D3YX18 52 aa4.19□□□□□ -1.74
Col6a3-208ENSMUST00000188587 Krtap1-3A2A588 173 aa4.15□□□□□ -1.74
Col6a3-208ENSMUST00000188587 Gm9789Q8BIG3 52 aa4.12□□□□□ -1.75
Col6a3-208ENSMUST00000188587 Gm11569B1AQB1 180 aa4.11□□□□□ -1.75
Col6a3-208ENSMUST00000188587 Mt4P47945 62 aa4.06□□□□□ -1.76
Col6a3-208ENSMUST00000188587 Krtap19-4Q925H7 84 aa4.06□□□□□ -1.76
Col6a3-208ENSMUST00000188587 Krtap9-3Q3V2C1 136 aa4.04□□□□□ -1.76
Col6a3-208ENSMUST00000188587 Dnah8Q91XQ0 4731 aa4.04□□□□□ -1.76
Col6a3-208ENSMUST00000188587 Gm10061D3Z714 54 aa4.02□□□□□ -1.77
Col6a3-208ENSMUST00000188587 Krtap4-2B1AQ85 167 aa3.97□□□□□ -1.77
Col6a3-208ENSMUST00000188587 Krtap4-6Q3V4B7 195 aa3.89□□□□□ -1.79
Col6a3-208ENSMUST00000188587 Lrp2A2ARV4 4660 aa3.84□□□□□ -1.8
Col6a3-208ENSMUST00000188587 Sprr2hO70559 108 aa3.82□□□□□ -1.8
Col6a3-208ENSMUST00000188587 Sprr2dO70555 85 aa3.74□□□□□ -1.81
Col6a3-208ENSMUST00000188587 Gm11562A0PK51 136 aa3.71□□□□□ -1.81
Col6a3-208ENSMUST00000188587 Krtap4-7Q9D732 168 aa3.7□□□□□ -1.82
Col6a3-208ENSMUST00000188587 2300003K06RikA2A4M0 262 aa3.69□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Kmt2cQ8BRH4 4903 aa3.69□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Krtap31-1Q9D644 177 aa3.68□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Krtap4-1Q3UUY3 169 aa3.67□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Krtap31-2Q8CAY5 177 aa3.67□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Ryr1E9PZQ0 5035 aa3.66□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Gm11596B1AQB0 205 aa3.66□□□□□ -1.82
Col6a3-208ENSMUST00000188587 Gm11938Q9D3H4 131 aa3.63□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Gm11564A2A4L9 201 aa3.61□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Gm11563B1AQ90 168 aa3.61□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Gm11595B1AQA7 289 aa3.61□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Krtap4-8B1AQA8 209 aa3.61□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Lce1a2Q9D1K4 149 aa3.61□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Krtap4-9B1AQA9 244 aa3.59□□□□□ -1.83
Col6a3-208ENSMUST00000188587 Dnhd1D3Z2X2 4750 aa3.59□□□□□ -1.84
Col6a3-208ENSMUST00000188587 Mt3P28184 68 aa3.56□□□□□ -1.84
Col6a3-208ENSMUST00000188587 Lce1kJ3QP15 125 aa3.55□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms