RNA–Protein interactions for RNA: YOR357C

SNX3, Transcript of Sorting nexin for late-Golgi enzymes, yeastyeast

Gene SNX3, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX3YOR357C HRD3Q05787 833 aa8.66□□□□□ -1.02
SNX3YOR357C MEU1Q07938 337 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
SNX3YOR357C SLD7Q08457 257 aa8.66□□□□□ -1.02
SNX3YOR357C RPS10AQ08745 105 aaPredicted RBP8.66□□□□□ -1.02
SNX3YOR357C APC9Q12107 265 aa8.66□□□□□ -1.02
SNX3YOR357C REC8Q12188 680 aa8.66□□□□□ -1.02
SNX3YOR357C TAF3Q12297 353 aa8.66□□□□□ -1.02
SNX3YOR357C YPR089WO13585 888 aa8.65□□□□□ -1.02
SNX3YOR357C CCP1P00431 361 aa8.65□□□□□ -1.02
SNX3YOR357C HSC82P15108 705 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C MET16P18408 261 aaPredicted RBP8.65□□□□□ -1.02
SNX3YOR357C ATP12P22135 325 aa8.65□□□□□ -1.02
SNX3YOR357C GFD2P25370 566 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C YIH1P25637 258 aa8.65□□□□□ -1.02
SNX3YOR357C BIO2P32451 375 aa8.65□□□□□ -1.02
SNX3YOR357C RIM4P38741 713 aa8.65□□□□□ -1.02
SNX3YOR357C SEC31P38968 1273 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C MAM33P40513 266 aa8.65□□□□□ -1.02
SNX3YOR357C INP51P40559 946 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C SEC27P41811 889 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C CCT7P42943 550 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C NCS6P53088 359 aa8.65□□□□□ -1.02
SNX3YOR357C COG2P53271 262 aa8.65□□□□□ -1.02
SNX3YOR357C ADE12P80210 433 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C MET14Q02196 202 aa8.65□□□□□ -1.02
SNX3YOR357C RPM2Q02773 1202 aa8.65□□□□□ -1.02
SNX3YOR357C SPO19Q03029 223 aa8.65□□□□□ -1.02
SNX3YOR357C ENT5Q03769 411 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C ENT4Q07872 247 aa8.65□□□□□ -1.02
SNX3YOR357C CHS5Q12114 671 aaKnown RBP8.65□□□□□ -1.02
SNX3YOR357C ARP7Q12406 477 aa8.65□□□□□ -1.02
SNX3YOR357C CAR1P00812 333 aaKnown RBP8.64□□□□□ -1.03
SNX3YOR357C RHO2P06781 192 aa8.64□□□□□ -1.03
SNX3YOR357C YAK1P14680 807 aa8.64□□□□□ -1.03
SNX3YOR357C RGR1P19263 1082 aa8.64□□□□□ -1.03
SNX3YOR357C AST1P35183 429 aa8.64□□□□□ -1.03
SNX3YOR357C SRP68P38687 599 aaKnown RBP8.64□□□□□ -1.03
SNX3YOR357C YHI9P38765 294 aa8.64□□□□□ -1.03
SNX3YOR357C YHR182WP38870 785 aa8.64□□□□□ -1.03
SNX3YOR357C SHU2P38957 223 aa8.64□□□□□ -1.03
SNX3YOR357C TVP23P38962 199 aa8.64□□□□□ -1.03
SNX3YOR357C MEF2P39677 819 aa8.64□□□□□ -1.03
SNX3YOR357C ESL1P40456 1118 aa8.64□□□□□ -1.03
SNX3YOR357C NRD1P53617 575 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
SNX3YOR357C YMR155WQ03795 547 aa8.64□□□□□ -1.03
SNX3YOR357C NHX1Q04121 633 aa8.64□□□□□ -1.03
SNX3YOR357C ESC8Q08119 714 aa8.64□□□□□ -1.03
SNX3YOR357C SUT2Q12286 268 aa8.64□□□□□ -1.03
SNX3YOR357C LDB19Q12502 818 aa8.64□□□□□ -1.03
SNX3YOR357C HAP2P06774 265 aa8.63□□□□□ -1.03
SNX3YOR357C CIT2P08679 460 aa8.63□□□□□ -1.03
SNX3YOR357C APE1P14904 514 aa8.63□□□□□ -1.03
SNX3YOR357C HSP26P15992 214 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
SNX3YOR357C URA4P20051 364 aa8.63□□□□□ -1.03
SNX3YOR357C ADY2P25613 283 aa8.63□□□□□ -1.03
SNX3YOR357C PAT1P25644 796 aaKnown RBP8.63□□□□□ -1.03
SNX3YOR357C FUB1P25659 250 aa8.63□□□□□ -1.03
SNX3YOR357C GCD11P32481 527 aaKnown RBP8.63□□□□□ -1.03
SNX3YOR357C DMA1P38823 416 aa8.63□□□□□ -1.03
SNX3YOR357C EDC3P39998 551 aaKnown RBP8.63□□□□□ -1.03
SNX3YOR357C ROK1P45818 564 aaPredicted RBP8.63□□□□□ -1.03
SNX3YOR357C GUF1P46943 645 aa8.63□□□□□ -1.03
SNX3YOR357C TRF5P48561 642 aaKnown RBP8.63□□□□□ -1.03
SNX3YOR357C YGR016WP53209 190 aa8.63□□□□□ -1.03
SNX3YOR357C CUS2P53830 285 aaPredicted RBP8.63□□□□□ -1.03
SNX3YOR357C YET2Q04210 160 aa8.63□□□□□ -1.03
SNX3YOR357C SPG3Q04398 127 aaPredicted RBP8.63□□□□□ -1.03
SNX3YOR357C BUD20Q08004 166 aaPredicted RBP8.63□□□□□ -1.03
SNX3YOR357C HIS1P00498 297 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C ATP2P00830 511 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C VPS34P22543 875 aa8.62□□□□□ -1.03
SNX3YOR357C MEF1P25039 761 aa8.62□□□□□ -1.03
SNX3YOR357C TFC1P32367 649 aa8.62□□□□□ -1.03
SNX3YOR357C MET4P32389 672 aa8.62□□□□□ -1.03
SNX3YOR357C MRS6P32864 603 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C FUI1P38196 639 aa8.62□□□□□ -1.03
SNX3YOR357C FHL1P39521 936 aa8.62□□□□□ -1.03
SNX3YOR357C MGS1P40151 587 aa8.62□□□□□ -1.03
SNX3YOR357C IAH1P41734 238 aa8.62□□□□□ -1.03
SNX3YOR357C SCY1P53009 804 aa8.62□□□□□ -1.03
SNX3YOR357C PRO2P54885 456 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C HPT1Q04178 221 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C PMT7Q06644 662 aa8.62□□□□□ -1.03
SNX3YOR357C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
SNX3YOR357C PKH2Q12236 1081 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C TIF6Q12522 245 aaKnown RBP8.62□□□□□ -1.03
SNX3YOR357C COX6P00427 148 aa8.61□□□□□ -1.03
SNX3YOR357C ERG20P08524 352 aaKnown RBP8.61□□□□□ -1.03
SNX3YOR357C SAN1P22470 610 aa8.61□□□□□ -1.03
SNX3YOR357C DAL1P32375 460 aa8.61□□□□□ -1.03
SNX3YOR357C ZUO1P32527 433 aaKnown RBP8.61□□□□□ -1.03
SNX3YOR357C ASK1P35734 292 aa8.61□□□□□ -1.03
SNX3YOR357C YKR078WP36158 585 aaKnown RBP8.61□□□□□ -1.03
SNX3YOR357C MAP2P38174 421 aaKnown RBP8.61□□□□□ -1.03
SNX3YOR357C MNN1P39106 762 aa8.61□□□□□ -1.03
SNX3YOR357C YHB1P39676 399 aaKnown RBP8.61□□□□□ -1.03
SNX3YOR357C AFG3P39925 761 aa8.61□□□□□ -1.03
SNX3YOR357C TGL3P40308 642 aa8.61□□□□□ -1.03
SNX3YOR357C YJR061WP40355 935 aa8.61□□□□□ -1.03
SNX3YOR357C CNN1P43618 361 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms