RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C GPN2Q08726 347 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C PGC1Q08959 321 aa2.38□□□□□ -2.03
SCD5YOR329C ADE4P04046 510 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C ARG4P04076 463 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C CMD1P06787 147 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C RAD3P06839 778 aa2.38□□□□□ -2.03
SCD5YOR329C RPL40AP0CH08 128 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C RPL40BP0CH09 128 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C EXO70P19658 623 aa2.38□□□□□ -2.03
SCD5YOR329C ATP12P22135 325 aa2.38□□□□□ -2.03
SCD5YOR329C PMI40P29952 429 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C SEC6P32844 805 aa2.38□□□□□ -2.03
SCD5YOR329C YKL100CP34248 587 aa2.38□□□□□ -2.03
SCD5YOR329C TOM20P35180 183 aa2.38□□□□□ -2.03
SCD5YOR329C ETR1P38071 380 aa2.38□□□□□ -2.03
SCD5YOR329C AGP2P38090 596 aa2.38□□□□□ -2.03
SCD5YOR329C YBR225WP38321 900 aa2.38□□□□□ -2.03
SCD5YOR329C YBR259WP38338 688 aa2.38□□□□□ -2.03
SCD5YOR329C PPX1P38698 397 aa2.38□□□□□ -2.03
SCD5YOR329C RIM4P38741 713 aa2.38□□□□□ -2.03
SCD5YOR329C RIX1P38883 763 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C YHB1P39676 399 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C FRT2P39734 528 aa2.38□□□□□ -2.03
SCD5YOR329C YEL028WP39989 153 aa2.38□□□□□ -2.03
SCD5YOR329C EDC3P39998 551 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C MRX1P40050 688 aa2.38□□□□□ -2.03
SCD5YOR329C ELO3P40319 345 aa2.38□□□□□ -2.03
SCD5YOR329C PRK1P40494 810 aa2.38□□□□□ -2.03
SCD5YOR329C NUP84P52891 726 aa2.38□□□□□ -2.03
SCD5YOR329C TPO2P53283 614 aa2.38□□□□□ -2.03
SCD5YOR329C SIW14P53965 281 aa2.38□□□□□ -2.03
SCD5YOR329C KTR6P54070 446 aa2.38□□□□□ -2.03
SCD5YOR329C SLG1P54867 378 aa2.38□□□□□ -2.03
SCD5YOR329C SPP2Q02521 185 aa2.38□□□□□ -2.03
SCD5YOR329C PNP1Q05788 311 aa2.38□□□□□ -2.03
SCD5YOR329C CDC123Q05791 360 aa2.38□□□□□ -2.03
SCD5YOR329C ECM38Q05902 660 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C ADE13Q05911 482 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C ECM22Q05958 814 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C BLS1Q06071 122 aa2.38□□□□□ -2.03
SCD5YOR329C TRE2Q08693 809 aa2.38□□□□□ -2.03
SCD5YOR329C DDC1Q08949 612 aa2.38□□□□□ -2.03
SCD5YOR329C GTT2Q12390 233 aa2.38□□□□□ -2.03
SCD5YOR329C NOT5Q12514 560 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C FRT1Q99332 602 aa2.38□□□□□ -2.03
SCD5YOR329C AI5_ALPHAQ9ZZX1 630 aa2.38□□□□□ -2.03
SCD5YOR329C RAD10P06838 210 aa2.38□□□□□ -2.03
SCD5YOR329C MPH2P0CD99 609 aa2.38□□□□□ -2.03
SCD5YOR329C CBF1P17106 351 aa2.38□□□□□ -2.03
SCD5YOR329C RPB4P20433 221 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C YCR015CP25616 317 aa2.38□□□□□ -2.03
SCD5YOR329C URK1P27515 501 aa2.38□□□□□ -2.03
SCD5YOR329C PHA2P32452 334 aa2.38□□□□□ -2.03
SCD5YOR329C STL1P39932 569 aa2.38□□□□□ -2.03
SCD5YOR329C HAT2P39984 401 aa2.38□□□□□ -2.03
SCD5YOR329C YER034WP40022 185 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C RIO2P40160 425 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C YJR061WP40355 935 aa2.38□□□□□ -2.03
SCD5YOR329C ALA1P40825 983 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C CDC1P40986 491 aa2.38□□□□□ -2.03
SCD5YOR329C BST1P43571 1029 aa2.38□□□□□ -2.03
SCD5YOR329C SIP4P46954 829 aa2.38□□□□□ -2.03
SCD5YOR329C ZAP1P47043 880 aa2.38□□□□□ -2.03
SCD5YOR329C MIG2P53035 382 aa2.38□□□□□ -2.03
SCD5YOR329C YGL140CP53120 1219 aa2.38□□□□□ -2.03
SCD5YOR329C TUB4P53378 473 aa2.38□□□□□ -2.03
SCD5YOR329C YNL011CP53980 444 aa2.38□□□□□ -2.03
SCD5YOR329C GTR1Q00582 310 aa2.38□□□□□ -2.03
SCD5YOR329C PET117Q02771 107 aa2.38□□□□□ -2.03
SCD5YOR329C RTN1Q04947 295 aaKnown RBP2.38□□□□□ -2.03
SCD5YOR329C FLC1Q08967 793 aa2.38□□□□□ -2.03
SCD5YOR329C HRT3Q12347 344 aa2.38□□□□□ -2.03
SCD5YOR329C YOR012WQ12351 137 aa2.38□□□□□ -2.03
SCD5YOR329C BRR1Q99177 341 aaPredicted RBP2.38□□□□□ -2.03
SCD5YOR329C RGS2Q99188 309 aa2.38□□□□□ -2.03
SCD5YOR329C YPT6Q99260 215 aa2.38□□□□□ -2.03
SCD5YOR329C AI3P03877 415 aa2.37□□□□□ -2.03
SCD5YOR329C HEM2P05373 342 aa2.37□□□□□ -2.03
SCD5YOR329C SSC1P0CS90 654 aaKnown RBP2.37□□□□□ -2.03
SCD5YOR329C MAS1P10507 462 aa2.37□□□□□ -2.03
SCD5YOR329C NMT1P14743 455 aa2.37□□□□□ -2.03
SCD5YOR329C PRP16P15938 1071 aaPredicted RBP2.37□□□□□ -2.03
SCD5YOR329C AAT2P23542 418 aaKnown RBP2.37□□□□□ -2.03
SCD5YOR329C ADK2P26364 225 aa2.37□□□□□ -2.03
SCD5YOR329C PBP2P38151 413 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SCD5YOR329C APM3P38153 483 aa2.37□□□□□ -2.03
SCD5YOR329C MRP21P38175 177 aa2.37□□□□□ -2.03
SCD5YOR329C PPE1P38796 400 aa2.37□□□□□ -2.03
SCD5YOR329C BEM4P39011 633 aa2.37□□□□□ -2.03
SCD5YOR329C EXO1P39875 702 aa2.37□□□□□ -2.03
SCD5YOR329C RPH1P39956 796 aa2.37□□□□□ -2.03
SCD5YOR329C FMP10P40098 244 aa2.37□□□□□ -2.03
SCD5YOR329C RRT5P43607 289 aa2.37□□□□□ -2.03
SCD5YOR329C RPS10BP46784 105 aaKnown RBP2.37□□□□□ -2.03
SCD5YOR329C MTR3P48240 250 aaPredicted RBP2.37□□□□□ -2.03
SCD5YOR329C PAN2P53010 1115 aaPredicted RBP2.37□□□□□ -2.03
SCD5YOR329C STR3P53101 465 aaKnown RBP2.37□□□□□ -2.03
SCD5YOR329C IPI3P53877 555 aa2.37□□□□□ -2.03
SCD5YOR329C SLM2P53955 656 aa2.37□□□□□ -2.03
SCD5YOR329C ADE12P80210 433 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms