RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C ERG4P25340 473 aa3.38□□□□□ -1.87
LCB4YOR171C LAS1P36146 502 aaPredicted RBP3.38□□□□□ -1.87
LCB4YOR171C PEX32P38292 413 aa3.38□□□□□ -1.87
LCB4YOR171C EFM2P38347 419 aa3.38□□□□□ -1.87
LCB4YOR171C GND1P38720 489 aaKnown RBP3.38□□□□□ -1.87
LCB4YOR171C PIH1P38768 344 aa3.38□□□□□ -1.87
LCB4YOR171C GIP4P39732 760 aa3.38□□□□□ -1.87
LCB4YOR171C STL1P39932 569 aa3.38□□□□□ -1.87
LCB4YOR171C BUD16P39988 312 aa3.38□□□□□ -1.87
LCB4YOR171C PKP1P40530 394 aa3.38□□□□□ -1.87
LCB4YOR171C AMA1P50082 593 aa3.38□□□□□ -1.87
LCB4YOR171C RTC4P53850 401 aa3.38□□□□□ -1.87
LCB4YOR171C INP2Q03824 705 aa3.38□□□□□ -1.87
LCB4YOR171C YDR131CQ03899 556 aa3.38□□□□□ -1.87
LCB4YOR171C ARR2Q06597 130 aa3.38□□□□□ -1.87
LCB4YOR171C YLR040CQ07988 224 aa3.38□□□□□ -1.87
LCB4YOR171C YOL114CQ12322 202 aa3.38□□□□□ -1.87
LCB4YOR171C ADF1Q2V2Q1 113 aa3.38□□□□□ -1.87
LCB4YOR171C YBL111CQ3E7Y5 667 aa3.38□□□□□ -1.87
LCB4YOR171C IKI3Q06706 1349 aaKnown RBP3.38□□□□□ -1.87
LCB4YOR171C CKA1P15790 372 aa3.37□□□□□ -1.87
LCB4YOR171C RRP7P25368 297 aaPredicted RBP3.37□□□□□ -1.87
LCB4YOR171C PMI40P29952 429 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C ERG3P32353 365 aa3.37□□□□□ -1.87
LCB4YOR171C ASF2P32448 525 aaPredicted RBP3.37□□□□□ -1.87
LCB4YOR171C HXT4P32467 576 aa3.37□□□□□ -1.87
LCB4YOR171C DPH5P32469 300 aaPredicted RBP3.37□□□□□ -1.87
LCB4YOR171C BUD2P33314 1104 aa3.37□□□□□ -1.87
LCB4YOR171C FMO1P38866 432 aa3.37□□□□□ -1.87
LCB4YOR171C LTP1P40347 161 aa3.37□□□□□ -1.87
LCB4YOR171C DPH1P40487 425 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C BUD8P41698 603 aa3.37□□□□□ -1.87
LCB4YOR171C CIR1P42940 261 aa3.37□□□□□ -1.87
LCB4YOR171C MDR1P53258 950 aa3.37□□□□□ -1.87
LCB4YOR171C LSC1P53598 329 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C YNR068CP53754 272 aa3.37□□□□□ -1.87
LCB4YOR171C SSL2Q00578 843 aa3.37□□□□□ -1.87
LCB4YOR171C ADA2Q02336 434 aa3.37□□□□□ -1.87
LCB4YOR171C YPL107WQ02873 248 aa3.37□□□□□ -1.87
LCB4YOR171C CTK1Q03957 528 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C YLR345WQ06137 509 aa3.37□□□□□ -1.87
LCB4YOR171C HIM1Q06674 414 aa3.37□□□□□ -1.87
LCB4YOR171C YCG1Q06680 1035 aa3.37□□□□□ -1.87
LCB4YOR171C AIM39Q08223 395 aa3.37□□□□□ -1.87
LCB4YOR171C IRC13Q08630 104 aa3.37□□□□□ -1.87
LCB4YOR171C FRE5Q08908 694 aa3.37□□□□□ -1.87
LCB4YOR171C YIL002W-AQ3E7Z5 69 aa3.37□□□□□ -1.87
LCB4YOR171C SEM1O94742 89 aa3.37□□□□□ -1.87
LCB4YOR171C PFK2P16862 959 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
LCB4YOR171C HCA4P20448 770 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C STE50P25344 346 aa3.37□□□□□ -1.87
LCB4YOR171C SPB1P25582 841 aaPredicted RBP3.37□□□□□ -1.87
LCB4YOR171C GPI10P30777 616 aa3.37□□□□□ -1.87
LCB4YOR171C HSP104P31539 908 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C LOT5P34234 306 aa3.37□□□□□ -1.87
LCB4YOR171C YUH1P35127 236 aa3.37□□□□□ -1.87
LCB4YOR171C ECM4P36156 370 aa3.37□□□□□ -1.87
LCB4YOR171C YBR225WP38321 900 aa3.37□□□□□ -1.87
LCB4YOR171C MTG2P38860 518 aa3.37□□□□□ -1.87
LCB4YOR171C DUN1P39009 513 aa3.37□□□□□ -1.87
LCB4YOR171C OSW5P40219 148 aa3.37□□□□□ -1.87
LCB4YOR171C NAS2P40555 220 aa3.37□□□□□ -1.87
LCB4YOR171C LCB2P40970 561 aa3.37□□□□□ -1.87
LCB4YOR171C STU2P46675 888 aa3.37□□□□□ -1.87
LCB4YOR171C YJL163CP46996 555 aa3.37□□□□□ -1.87
LCB4YOR171C BIT61P47041 543 aa3.37□□□□□ -1.87
LCB4YOR171C SLD3P53135 668 aa3.37□□□□□ -1.87
LCB4YOR171C ARE2P53629 642 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C MOT3P54785 490 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C CIK1Q01649 594 aa3.37□□□□□ -1.87
LCB4YOR171C KIN4Q01919 800 aa3.37□□□□□ -1.87
LCB4YOR171C ADY4Q05955 493 aa3.37□□□□□ -1.87
LCB4YOR171C THI22Q06490 572 aa3.37□□□□□ -1.87
LCB4YOR171C PEX15Q08215 383 aa3.37□□□□□ -1.87
LCB4YOR171C MDY2Q12285 212 aa3.37□□□□□ -1.87
LCB4YOR171C TAF3Q12297 353 aa3.37□□□□□ -1.87
LCB4YOR171C SFI1Q12369 946 aa3.37□□□□□ -1.87
LCB4YOR171C RVB2Q12464 471 aaKnown RBP3.37□□□□□ -1.87
LCB4YOR171C ERG20P08524 352 aaKnown RBP3.36□□□□□ -1.87
LCB4YOR171C CLC1P17891 233 aa3.36□□□□□ -1.87
LCB4YOR171C DBP3P20447 523 aaKnown RBP3.36□□□□□ -1.87
LCB4YOR171C PEX1P24004 1043 aa3.36□□□□□ -1.87
LCB4YOR171C DMC1P25453 334 aa3.36□□□□□ -1.87
LCB4YOR171C YCR015CP25616 317 aa3.36□□□□□ -1.87
LCB4YOR171C ITR1P30605 584 aa3.36□□□□□ -1.87
LCB4YOR171C PUP2P32379 260 aa3.36□□□□□ -1.87
LCB4YOR171C MF(ALPHA)2P32435 120 aa3.36□□□□□ -1.87
LCB4YOR171C DOA4P32571 926 aa3.36□□□□□ -1.87
LCB4YOR171C GYP6P32806 458 aa3.36□□□□□ -1.87
LCB4YOR171C SLX1P38324 304 aa3.36□□□□□ -1.87
LCB4YOR171C STN1P38960 494 aa3.36□□□□□ -1.87
LCB4YOR171C NUP60P39705 539 aa3.36□□□□□ -1.87
LCB4YOR171C YIR014WP40570 242 aa3.36□□□□□ -1.87
LCB4YOR171C INA22P40576 216 aa3.36□□□□□ -1.87
LCB4YOR171C DAK1P54838 584 aaKnown RBP3.36□□□□□ -1.87
LCB4YOR171C TOF2Q02208 771 aa3.36□□□□□ -1.87
LCB4YOR171C RMT2Q03305 412 aa3.36□□□□□ -1.87
LCB4YOR171C GIS1Q03833 894 aa3.36□□□□□ -1.87
LCB4YOR171C RBA50Q04418 439 aa3.36□□□□□ -1.87
LCB4YOR171C YOR389WQ08912 624 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms