RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C VBA2P38358 474 aaKnown RBP3.28□□□□□ -1.88
SHE4YOR035C TRS130Q03660 1102 aa3.28□□□□□ -1.88
SHE4YOR035C RVB2Q12464 471 aaKnown RBP3.28□□□□□ -1.88
SHE4YOR035C YLR111WQ12528 110 aa3.28□□□□□ -1.88
SHE4YOR035C URK1P27515 501 aa3.27□□□□□ -1.89
SHE4YOR035C KES1P35844 434 aaKnown RBP3.27□□□□□ -1.89
SHE4YOR035C RPT2P40327 437 aaKnown RBP3.27□□□□□ -1.89
SHE4YOR035C LTP1P40347 161 aa3.27□□□□□ -1.89
SHE4YOR035C UBX6P47049 396 aa3.27□□□□□ -1.89
SHE4YOR035C NPA3P47122 385 aa3.27□□□□□ -1.89
SHE4YOR035C BLS1Q06071 122 aa3.27□□□□□ -1.89
SHE4YOR035C YPL191CQ08930 360 aa3.27□□□□□ -1.89
SHE4YOR035C COX1P00401 534 aa3.27□□□□□ -1.89
SHE4YOR035C SES1P07284 462 aaKnown RBP3.27□□□□□ -1.89
SHE4YOR035C PTH2P34222 208 aa3.27□□□□□ -1.89
SHE4YOR035C MRPL36P36531 177 aa3.27□□□□□ -1.89
SHE4YOR035C PSF2P40359 213 aa3.27□□□□□ -1.89
SHE4YOR035C ULP2P40537 1034 aaPredicted RBP3.27□□□□□ -1.89
SHE4YOR035C ERG13P54839 491 aaKnown RBP3.27□□□□□ -1.89
SHE4YOR035C PRS5Q12265 496 aaKnown RBP3.27□□□□□ -1.89
SHE4YOR035C SNO3P43544 222 aa3.26□□□□□ -1.89
SHE4YOR035C NMD5P46970 1048 aa3.26□□□□□ -1.89
SHE4YOR035C MTG1Q03151 367 aaPredicted RBP3.26□□□□□ -1.89
SHE4YOR035C VMS1Q04311 632 aaKnown RBP3.26□□□□□ -1.89
SHE4YOR035C RAD34Q06665 692 aa3.26□□□□□ -1.89
SHE4YOR035C NUC1P08466 329 aa3.26□□□□□ -1.89
SHE4YOR035C BIK1P11709 440 aa3.26□□□□□ -1.89
SHE4YOR035C NCP1P16603 691 aaKnown RBP3.26□□□□□ -1.89
SHE4YOR035C YCL049CP25577 312 aa3.26□□□□□ -1.89
SHE4YOR035C LAC1P28496 418 aa3.26□□□□□ -1.89
SHE4YOR035C DBF20P32328 564 aa3.26□□□□□ -1.89
SHE4YOR035C MRS6P32864 603 aaKnown RBP3.26□□□□□ -1.89
SHE4YOR035C IMD2P38697 523 aaKnown RBP3.26□□□□□ -1.89
SHE4YOR035C ERR3P42222 437 aa3.26□□□□□ -1.89
SHE4YOR035C IMD3P50095 523 aaKnown RBP3.26□□□□□ -1.89
SHE4YOR035C YAT1P80235 687 aa3.26□□□□□ -1.89
SHE4YOR035C RSC9Q03124 581 aa3.26□□□□□ -1.89
SHE4YOR035C SNU56Q03782 492 aaKnown RBP3.26□□□□□ -1.89
SHE4YOR035C PSA1P41940 361 aaKnown RBP3.25□□□□□ -1.89
SHE4YOR035C NET1P47035 1189 aa3.25□□□□□ -1.89
SHE4YOR035C BNA3P47039 444 aaKnown RBP3.25□□□□□ -1.89
SHE4YOR035C ARC35P53731 342 aaKnown RBP3.25□□□□□ -1.89
SHE4YOR035C GTB1Q04924 702 aa3.25□□□□□ -1.89
SHE4YOR035C STP3Q05937 343 aa3.25□□□□□ -1.89
SHE4YOR035C LYS21Q12122 440 aaKnown RBP3.25□□□□□ -1.89
SHE4YOR035C ILS1P09436 1072 aaKnown RBP3.25□□□□□ -1.89
SHE4YOR035C IDP3P53982 420 aaKnown RBP3.25□□□□□ -1.89
SHE4YOR035C STP1Q00947 519 aa3.25□□□□□ -1.89
SHE4YOR035C MRPL13Q02204 264 aa3.25□□□□□ -1.89
SHE4YOR035C ATG16Q03818 150 aa3.25□□□□□ -1.89
SHE4YOR035C YDR109CQ04585 715 aa3.25□□□□□ -1.89
SHE4YOR035C CIA1Q05583 330 aa3.25□□□□□ -1.89
SHE4YOR035C CET1O13297 549 aaPredicted RBP3.24□□□□□ -1.89
SHE4YOR035C RAD16P31244 790 aa3.24□□□□□ -1.89
SHE4YOR035C NUP120P35729 1037 aa3.24□□□□□ -1.89
SHE4YOR035C AFT2Q08957 416 aa3.24□□□□□ -1.89
SHE4YOR035C PTC6P25646 442 aa3.24□□□□□ -1.89
SHE4YOR035C HES1P35843 434 aa3.24□□□□□ -1.89
SHE4YOR035C YIL161WP40449 235 aaKnown RBP3.24□□□□□ -1.89
SHE4YOR035C SAP185P40856 1058 aa3.24□□□□□ -1.89
SHE4YOR035C CIN1P40987 1014 aa3.24□□□□□ -1.89
SHE4YOR035C IRC7P43623 340 aa3.24□□□□□ -1.89
SHE4YOR035C LEA1Q08963 238 aaPredicted RBP3.24□□□□□ -1.89
SHE4YOR035C ATP2P00830 511 aaKnown RBP3.23□□□□□ -1.89
SHE4YOR035C TPK1P06244 397 aa3.23□□□□□ -1.89
SHE4YOR035C MAK32P23060 363 aa3.23□□□□□ -1.89
SHE4YOR035C NPR3P38742 1146 aa3.23□□□□□ -1.89
SHE4YOR035C ERV46P39727 415 aa3.23□□□□□ -1.89
SHE4YOR035C SMK1P41808 388 aa3.23□□□□□ -1.89
SHE4YOR035C COX17Q12287 69 aa3.23□□□□□ -1.89
SHE4YOR035C CRC1Q12289 327 aa3.23□□□□□ -1.89
SHE4YOR035C YMR085WP0CF18 432 aa3.23□□□□□ -1.89
SHE4YOR035C RFA2P26754 273 aaKnown RBP3.23□□□□□ -1.89
SHE4YOR035C GSH1P32477 678 aa3.23□□□□□ -1.89
SHE4YOR035C VPS24P36095 224 aaKnown RBP3.23□□□□□ -1.89
SHE4YOR035C BUD16P39988 312 aa3.23□□□□□ -1.89
SHE4YOR035C VAM6Q07468 1049 aa3.23□□□□□ -1.89
SHE4YOR035C THI3Q07471 609 aa3.23□□□□□ -1.89
SHE4YOR035C YAP1P19880 650 aaKnown RBP3.22□□□□□ -1.89
SHE4YOR035C PWP2P25635 923 aaKnown RBP3.22□□□□□ -1.89
SHE4YOR035C DJP1P40564 432 aa3.22□□□□□ -1.89
SHE4YOR035C YRB30P53107 440 aaPredicted RBP3.22□□□□□ -1.89
SHE4YOR035C ATG23Q06671 453 aa3.22□□□□□ -1.89
SHE4YOR035C SWT1Q12104 458 aa3.22□□□□□ -1.89
SHE4YOR035C SSM4P40318 1319 aa3.22□□□□□ -1.89
SHE4YOR035C MTF2P10849 440 aa3.22□□□□□ -1.89
SHE4YOR035C PFK2P16862 959 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SHE4YOR035C UBC1P21734 215 aaKnown RBP3.22□□□□□ -1.89
SHE4YOR035C COQ3P27680 312 aa3.22□□□□□ -1.89
SHE4YOR035C MSS51P32335 436 aa3.22□□□□□ -1.89
SHE4YOR035C IFA38P38286 347 aa3.22□□□□□ -1.89
SHE4YOR035C IES5P40060 125 aa3.22□□□□□ -1.89
SHE4YOR035C ORC5P50874 479 aa3.22□□□□□ -1.89
SHE4YOR035C ADE16P54113 591 aaKnown RBP3.22□□□□□ -1.89
SHE4YOR035C CSR1Q06705 408 aaKnown RBP3.22□□□□□ -1.89
SHE4YOR035C PSR2Q07949 397 aa3.22□□□□□ -1.89
SHE4YOR035C PCD1Q12524 340 aa3.22□□□□□ -1.89
SHE4YOR035C SUI3P09064 285 aaKnown RBP3.21□□□□□ -1.9
SHE4YOR035C YML003WP0CF16 290 aa3.21□□□□□ -1.9
SHE4YOR035C LRE1P25579 583 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms