RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	YML096W	Q04489	525 aa		4.98	□□□□□ -1.61
RCL1	YOL010W	EIS1	Q05050	843 aa	Known RBP	4.98	□□□□□ -1.61
RCL1	YOL010W	YLR224W	Q05947	369 aa		4.98	□□□□□ -1.61
RCL1	YOL010W	YLR407W	Q06070	228 aa		4.98	□□□□□ -1.61
RCL1	YOL010W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RCL1	YOL010W	SAM4	Q08985	325 aa	Known RBP	4.98	□□□□□ -1.61
RCL1	YOL010W	NBP2	Q12163	236 aa		4.98	□□□□□ -1.61
RCL1	YOL010W	PTC5	Q12511	572 aa		4.98	□□□□□ -1.61
RCL1	YOL010W	RPL19A	P0CX82	189 aa	Known RBP	4.97	□□□□□ -1.61
RCL1	YOL010W	RPL19B	P0CX83	189 aa	Predicted RBP	4.97	□□□□□ -1.61
RCL1	YOL010W	ARF2	P19146	181 aa	Known RBP	4.97	□□□□□ -1.61
RCL1	YOL010W	CKA2	P19454	339 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	MSS4	P38994	779 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	SER33	P40510	469 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	OSW7	P43611	510 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	DAS1	P47005	663 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	RPN4	Q03465	531 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	YMR206W	Q03695	313 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	ENT2	Q05785	613 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	YDR061W	Q12298	539 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	RIB2	Q12362	591 aa	Known RBP	4.97	□□□□□ -1.61
RCL1	YOL010W	NAG1	Q8TGN9	163 aa		4.97	□□□□□ -1.61
RCL1	YOL010W	HEM13	P11353	328 aa	Known RBP	4.96	□□□□□ -1.62
RCL1	YOL010W	MUD1	P32605	298 aa	Known RBP	4.96	□□□□□ -1.62
RCL1	YOL010W	YEL1	P34225	687 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	PET10	P36139	283 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	ECM13	P38195	257 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	GEM1	P39722	662 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	CDC1	P40986	491 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	ATG36	P46983	293 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	CIS3	P47001	227 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	PIL1	P53252	339 aa	Known RBP	4.96	□□□□□ -1.62
RCL1	YOL010W	PIR3	Q03180	325 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	RSM10	Q03201	203 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	NUT2	Q06213	157 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	YSH1	Q06224	779 aa	Predicted RBP	4.96	□□□□□ -1.62
RCL1	YOL010W	DDC1	Q08949	612 aa		4.96	□□□□□ -1.62
RCL1	YOL010W	PHO8	P11491	566 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	NAT1	P12945	854 aa	Known RBP	4.95	□□□□□ -1.62
RCL1	YOL010W	SEC63	P14906	663 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	ALG1	P16661	449 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
RCL1	YOL010W	PPS1	P38148	807 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	KAP123	P40069	1113 aa	Known RBP	4.95	□□□□□ -1.62
RCL1	YOL010W	DSE1	P40077	573 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	FTR1	P40088	404 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	YJL070C	P40361	888 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	MDJ2	P42834	146 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	SMC3	P47037	1230 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	YJR054W	P47114	497 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	CTF18	P49956	741 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	YGL140C	P53120	1219 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	THI73	Q07904	523 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	CLP1	Q08685	445 aa	Predicted RBP	4.95	□□□□□ -1.62
RCL1	YOL010W	NDD1	Q08887	554 aa		4.95	□□□□□ -1.62
RCL1	YOL010W	GET3	Q12154	354 aa	Known RBP	4.95	□□□□□ -1.62
RCL1	YOL010W	FOB1	O13329	566 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	PGI1	P12709	554 aa	Known RBP	4.94	□□□□□ -1.62
RCL1	YOL010W	EMC1	P25574	760 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	LRE1	P25579	583 aa	Known RBP	4.94	□□□□□ -1.62
RCL1	YOL010W	CAP1	P28495	268 aa	Known RBP	4.94	□□□□□ -1.62
RCL1	YOL010W	DCG1	P32460	244 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	EFB1	P32471	206 aa	Known RBP	4.94	□□□□□ -1.62
RCL1	YOL010W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RCL1	YOL010W	RSM25	P40496	264 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	YFL054C	P43549	646 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	YPL113C	Q02961	396 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	MZM1	Q03429	123 aa	Predicted RBP	4.94	□□□□□ -1.62
RCL1	YOL010W	DAL4	Q04895	635 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	ECM38	Q05902	660 aa	Predicted RBP	4.94	□□□□□ -1.62
RCL1	YOL010W	YOL073C	Q08232	322 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	DCS2	Q12123	353 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	YPL066W	Q12194	479 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	LCB4	Q12246	624 aa		4.94	□□□□□ -1.62
RCL1	YOL010W	ISY1	P21374	235 aa	Predicted RBP	4.93	□□□□□ -1.62
RCL1	YOL010W	CWP1	P28319	239 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	BEM1	P29366	551 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	PXA2	P34230	853 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	MPE1	P35728	441 aa	Known RBP	4.93	□□□□□ -1.62
RCL1	YOL010W	ALG3	P38179	458 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	EXO1	P39875	702 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	UBX6	P47049	396 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	UBA2	P52488	636 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	HRD3	Q05787	833 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	RTT10	Q08924	1013 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	YPL272C	Q08984	517 aa		4.93	□□□□□ -1.62
RCL1	YOL010W	KIN2	P13186	1147 aa	Known RBP	4.92	□□□□□ -1.62
RCL1	YOL010W	ABF1	P14164	731 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	IME1	P21190	360 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	RNR1	P21524	888 aa	Known RBP	4.92	□□□□□ -1.62
RCL1	YOL010W	DAL7	P21826	554 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	SAT4	P25333	603 aa	Known RBP	4.92	□□□□□ -1.62
RCL1	YOL010W	MUM2	P38236	366 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	ERP5	P38819	212 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	YIL108W	P40483	696 aa	Known RBP	4.92	□□□□□ -1.62
RCL1	YOL010W	ALR2	P43553	858 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	CEF1	Q03654	590 aa	Predicted RBP	4.92	□□□□□ -1.62
RCL1	YOL010W	MCP2	Q06567	569 aa		4.92	□□□□□ -1.62
RCL1	YOL010W	ABP140	Q08641	628 aa	Known RBP	4.92	□□□□□ -1.62
RCL1	YOL010W	HMI1	Q12039	706 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 144.9 ms