RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C CAD1P24813 409 aaKnown RBP5.59□□□□□ -1.52
VBA1YMR088C GRR1P24814 1151 aa5.59□□□□□ -1.52
VBA1YMR088C MLF3P32047 452 aa5.59□□□□□ -1.52
VBA1YMR088C KTR2P33550 425 aa5.59□□□□□ -1.52
VBA1YMR088C LRG1P35688 1017 aa5.59□□□□□ -1.52
VBA1YMR088C AAP1P37898 856 aaKnown RBP5.59□□□□□ -1.52
VBA1YMR088C YBR225WP38321 900 aa5.59□□□□□ -1.52
VBA1YMR088C APM2P38700 605 aa5.59□□□□□ -1.52
VBA1YMR088C STL1P39932 569 aa5.59□□□□□ -1.52
VBA1YMR088C YJR120WP47157 116 aa5.59□□□□□ -1.52
VBA1YMR088C ARI1P53111 347 aaKnown RBP5.59□□□□□ -1.52
VBA1YMR088C LCL3P53153 274 aa5.59□□□□□ -1.52
VBA1YMR088C YGR012WP53206 393 aa5.59□□□□□ -1.52
VBA1YMR088C TOF2Q02208 771 aa5.59□□□□□ -1.52
VBA1YMR088C MEC3Q02574 474 aa5.59□□□□□ -1.52
VBA1YMR088C RLI1Q03195 608 aaKnown RBP5.59□□□□□ -1.52
VBA1YMR088C COA4Q05809 96 aa5.59□□□□□ -1.52
VBA1YMR088C MLC2Q06580 163 aa5.59□□□□□ -1.52
VBA1YMR088C UIP4Q08926 304 aa5.59□□□□□ -1.52
VBA1YMR088C RRG1Q12167 365 aaPredicted RBP5.59□□□□□ -1.52
VBA1YMR088C OSW2Q12202 724 aa5.59□□□□□ -1.52
VBA1YMR088C HOS1Q12214 470 aa5.59□□□□□ -1.52
VBA1YMR088C YCL001W-BQ96VH2 84 aa5.59□□□□□ -1.52
VBA1YMR088C TRM732Q03496 1420 aa5.58□□□□□ -1.52
VBA1YMR088C CDC19P00549 500 aaKnown RBP5.58□□□□□ -1.52
VBA1YMR088C PMA1P05030 918 aaKnown RBP5.58□□□□□ -1.52
VBA1YMR088C CBP6P07253 162 aaPredicted RBP5.58□□□□□ -1.52
VBA1YMR088C CKI1P20485 582 aa5.58□□□□□ -1.52
VBA1YMR088C VMA16P23968 213 aa5.58□□□□□ -1.52
VBA1YMR088C VMA3P25515 160 aa5.58□□□□□ -1.52
VBA1YMR088C YCR101CP25607 182 aa5.58□□□□□ -1.52
VBA1YMR088C DBF20P32328 564 aa5.58□□□□□ -1.52
VBA1YMR088C CBF2P32504 956 aa5.58□□□□□ -1.52
VBA1YMR088C PRP40P33203 583 aaKnown RBP5.58□□□□□ -1.52
VBA1YMR088C SQT1P35184 431 aa5.58□□□□□ -1.52
VBA1YMR088C SHM1P37292 490 aaPredicted RBP5.58□□□□□ -1.52
VBA1YMR088C LNP1P38878 278 aa5.58□□□□□ -1.52
VBA1YMR088C PZF1P39933 429 aa5.58□□□□□ -1.52
VBA1YMR088C DDI1P40087 428 aa5.58□□□□□ -1.52
VBA1YMR088C KHA1P40309 873 aa5.58□□□□□ -1.52
VBA1YMR088C GUS1P46655 708 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
VBA1YMR088C YJR098CP47139 656 aa5.58□□□□□ -1.52
VBA1YMR088C RMR1P53060 241 aa5.58□□□□□ -1.52
VBA1YMR088C MRM2P53123 320 aa5.58□□□□□ -1.52
VBA1YMR088C CNM67P53865 581 aaKnown RBP5.58□□□□□ -1.52
VBA1YMR088C TRS120Q04183 1289 aa5.58□□□□□ -1.52
VBA1YMR088C STE23Q06010 1027 aa5.58□□□□□ -1.52
VBA1YMR088C RGC1Q06108 1083 aaKnown RBP5.58□□□□□ -1.52
VBA1YMR088C YLR345WQ06137 509 aa5.58□□□□□ -1.52
VBA1YMR088C YPR091CQ06833 770 aa5.58□□□□□ -1.52
VBA1YMR088C THI3Q07471 609 aa5.58□□□□□ -1.52
VBA1YMR088C YLL007CQ07799 665 aa5.58□□□□□ -1.52
VBA1YMR088C YLR125WQ12138 136 aa5.58□□□□□ -1.52
VBA1YMR088C YPR022CQ12139 1133 aa5.58□□□□□ -1.52
VBA1YMR088C RBD2Q12270 262 aa5.58□□□□□ -1.52
VBA1YMR088C HSH49Q99181 213 aaPredicted RBP5.58□□□□□ -1.52
VBA1YMR088C SNT2P53127 1403 aa5.58□□□□□ -1.52
VBA1YMR088C SSK2P53599 1579 aa5.58□□□□□ -1.52
VBA1YMR088C ROM2P51862 1356 aaKnown RBP5.58□□□□□ -1.52
VBA1YMR088C RPS31P05759 152 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C CHS1P08004 1131 aa5.57□□□□□ -1.52
VBA1YMR088C PRB1P09232 635 aa5.57□□□□□ -1.52
VBA1YMR088C TUB1P09733 447 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C TRK1P12685 1235 aa5.57□□□□□ -1.52
VBA1YMR088C PRP4P20053 465 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C DBP5P20449 482 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C DBP2P24783 546 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C PDB1P32473 366 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C TPO5P36029 618 aa5.57□□□□□ -1.52
VBA1YMR088C GLG1P36143 616 aa5.57□□□□□ -1.52
VBA1YMR088C AHP1P38013 176 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C MGE1P38523 228 aa5.57□□□□□ -1.52
VBA1YMR088C RCK2P38623 610 aa5.57□□□□□ -1.52
VBA1YMR088C SPF1P39986 1215 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C SCS2P40075 244 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C AXL1P40851 1208 aa5.57□□□□□ -1.52
VBA1YMR088C THI12P42883 340 aa5.57□□□□□ -1.52
VBA1YMR088C THI5P43534 340 aa5.57□□□□□ -1.52
VBA1YMR088C YJR141WP47172 347 aaPredicted RBP5.57□□□□□ -1.52
VBA1YMR088C GTO1P48239 356 aa5.57□□□□□ -1.52
VBA1YMR088C BPL1P48445 690 aaPredicted RBP5.57□□□□□ -1.52
VBA1YMR088C SUT1P53032 299 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C RCF2P53721 224 aa5.57□□□□□ -1.52
VBA1YMR088C CBK1P53894 756 aa5.57□□□□□ -1.52
VBA1YMR088C PGA2P53903 129 aa5.57□□□□□ -1.52
VBA1YMR088C SLU7Q02775 382 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C EAR1Q03212 550 aa5.57□□□□□ -1.52
VBA1YMR088C YMR010WQ03687 405 aa5.57□□□□□ -1.52
VBA1YMR088C PPM1Q04081 328 aa5.57□□□□□ -1.52
VBA1YMR088C DUS3Q06053 668 aaKnown RBP5.57□□□□□ -1.52
VBA1YMR088C THI13Q07748 340 aa5.57□□□□□ -1.52
VBA1YMR088C MNL2Q12205 849 aa5.57□□□□□ -1.52
VBA1YMR088C TY1A-DR3Q12441 440 aa5.57□□□□□ -1.52
VBA1YMR088C POL3P15436 1097 aa5.56□□□□□ -1.52
VBA1YMR088C COX11P19516 300 aaKnown RBP5.56□□□□□ -1.52
VBA1YMR088C PRE10P21242 288 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
VBA1YMR088C RET1P22276 1149 aaKnown RBP5.56□□□□□ -1.52
VBA1YMR088C MIH1P23748 554 aa5.56□□□□□ -1.52
VBA1YMR088C SWI4P25302 1093 aaKnown RBP5.56□□□□□ -1.52
VBA1YMR088C CYM1P32898 989 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms