RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM12	YML005W	ALY1	P36117	915 aa		4.15	□□□□□ -1.74
TRM12	YML005W	APL3	P38065	1025 aa		4.15	□□□□□ -1.74
TRM12	YML005W	PCL5	P38794	229 aa		4.15	□□□□□ -1.74
TRM12	YML005W	TPA1	P40032	644 aa	Known RBP	4.15	□□□□□ -1.74
TRM12	YML005W	SKP2	P42843	763 aa		4.15	□□□□□ -1.74
TRM12	YML005W	IRC6	P43615	237 aa		4.15	□□□□□ -1.74
TRM12	YML005W	ARC1	P46672	376 aa	Known RBP	4.15	□□□□□ -1.74
TRM12	YML005W	SGM1	P47166	707 aa		4.15	□□□□□ -1.74
TRM12	YML005W	ASE1	P50275	885 aa		4.15	□□□□□ -1.74
TRM12	YML005W	YGR079W	P53249	370 aa		4.15	□□□□□ -1.74
TRM12	YML005W	RIA1	P53893	1110 aa		4.15	□□□□□ -1.74
TRM12	YML005W	MUK1	Q02866	612 aa		4.15	□□□□□ -1.74
TRM12	YML005W	NGL3	Q03210	505 aa		4.15	□□□□□ -1.74
TRM12	YML005W	RAD30	Q04049	632 aa		4.15	□□□□□ -1.74
TRM12	YML005W	TAF11	Q04226	346 aa		4.15	□□□□□ -1.74
TRM12	YML005W	YPL216W	Q08964	1102 aa		4.15	□□□□□ -1.74
TRM12	YML005W	YER175W-A	Q8TGU4	54 aa		4.15	□□□□□ -1.74
TRM12	YML005W	YOR111W	Q99210	232 aa		4.15	□□□□□ -1.74
TRM12	YML005W	CDC24	P11433	854 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM12	YML005W	KAR3	P17119	729 aa		4.14	□□□□□ -1.75
TRM12	YML005W	SWC3	P31376	625 aa		4.14	□□□□□ -1.75
TRM12	YML005W	TRM2	P33753	639 aa		4.14	□□□□□ -1.75
TRM12	YML005W	TDP1	P38319	544 aa		4.14	□□□□□ -1.75
TRM12	YML005W	CBR1	P38626	284 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	NDC80	P40460	691 aa		4.14	□□□□□ -1.75
TRM12	YML005W	VTC2	P43585	828 aa		4.14	□□□□□ -1.75
TRM12	YML005W	RMD8	P43620	662 aa		4.14	□□□□□ -1.75
TRM12	YML005W	DSD1	P53095	428 aa		4.14	□□□□□ -1.75
TRM12	YML005W	PIL1	P53252	339 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	SLI1	P53304	468 aa		4.14	□□□□□ -1.75
TRM12	YML005W	INN1	P53901	409 aa		4.14	□□□□□ -1.75
TRM12	YML005W	SMX3	P54999	86 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM12	YML005W	SSL2	Q00578	843 aa		4.14	□□□□□ -1.75
TRM12	YML005W	YMR206W	Q03695	313 aa		4.14	□□□□□ -1.75
TRM12	YML005W	TAH18	Q12181	623 aa		4.14	□□□□□ -1.75
TRM12	YML005W	YBR255C-A	Q3E776	120 aa		4.14	□□□□□ -1.75
TRM12	YML005W	HSH49	Q99181	213 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM12	YML005W	CET1	O13297	549 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM12	YML005W	YCK1	P23291	538 aa		4.14	□□□□□ -1.75
TRM12	YML005W	RFA2	P26754	273 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	SAC6	P32599	642 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	MIT1	P40002	666 aa		4.14	□□□□□ -1.75
TRM12	YML005W	PFK26	P40433	827 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	YIL161W	P40449	235 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	PMT6	P42934	759 aa		4.14	□□□□□ -1.75
TRM12	YML005W	MRX6	P48564	524 aa		4.14	□□□□□ -1.75
TRM12	YML005W	SPC98	P53540	846 aa		4.14	□□□□□ -1.75
TRM12	YML005W	YDR179W-A	Q03983	463 aa		4.14	□□□□□ -1.75
TRM12	YML005W	GTB1	Q04924	702 aa		4.14	□□□□□ -1.75
TRM12	YML005W	UTP21	Q06078	939 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM12	YML005W	RIX7	Q07844	837 aa	Known RBP	4.14	□□□□□ -1.75
TRM12	YML005W	SWT1	Q12104	458 aa		4.14	□□□□□ -1.75
TRM12	YML005W	NBP2	Q12163	236 aa		4.14	□□□□□ -1.75
TRM12	YML005W	YBR126W-A	Q8TGU7	68 aa		4.14	□□□□□ -1.75
TRM12	YML005W	YOR019W	Q99248	730 aa		4.14	□□□□□ -1.75
TRM12	YML005W	PDE1	P22434	369 aa		4.13	□□□□□ -1.75
TRM12	YML005W	LRE1	P25579	583 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	PMI40	P29952	429 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	KTR3	P38130	404 aa	Predicted RBP	4.13	□□□□□ -1.75
TRM12	YML005W	YJL206C	P39529	758 aa		4.13	□□□□□ -1.75
TRM12	YML005W	JHD1	P40034	492 aa		4.13	□□□□□ -1.75
TRM12	YML005W	CCT7	P42943	550 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	UBP16	Q02863	499 aa		4.13	□□□□□ -1.75
TRM12	YML005W	NGL2	Q03264	515 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	MRI1	Q06489	411 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	YDL242W	Q07746	117 aa		4.13	□□□□□ -1.75
TRM12	YML005W	BMS1	Q08965	1183 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	HUA2	Q12134	243 aa		4.13	□□□□□ -1.75
TRM12	YML005W	PGA3	Q12746	312 aa	Known RBP	4.13	□□□□□ -1.75
TRM12	YML005W	COX1	P00401	534 aa		4.12	□□□□□ -1.75
TRM12	YML005W	ARG3	P05150	338 aa		4.12	□□□□□ -1.75
TRM12	YML005W	SPO16	P17122	198 aa		4.12	□□□□□ -1.75
TRM12	YML005W	YSP3	P25036	478 aa		4.12	□□□□□ -1.75
TRM12	YML005W	PGS1	P25578	521 aa		4.12	□□□□□ -1.75
TRM12	YML005W	GDA1	P32621	518 aa		4.12	□□□□□ -1.75
TRM12	YML005W	GMH1	P36125	273 aa		4.12	□□□□□ -1.75
TRM12	YML005W	ERC1	P38767	581 aa		4.12	□□□□□ -1.75
TRM12	YML005W	LNP1	P38878	278 aa		4.12	□□□□□ -1.75
TRM12	YML005W	SLZ1	P40167	298 aa		4.12	□□□□□ -1.75
TRM12	YML005W	ARG2	P40360	574 aa		4.12	□□□□□ -1.75
TRM12	YML005W	THI6	P41835	540 aa		4.12	□□□□□ -1.75
TRM12	YML005W	NPA3	P47122	385 aa		4.12	□□□□□ -1.75
TRM12	YML005W	AAD10	P47182	288 aa		4.12	□□□□□ -1.75
TRM12	YML005W	YGL036W	P53185	909 aa	Predicted RBP	4.12	□□□□□ -1.75
TRM12	YML005W	VPS75	P53853	264 aa		4.12	□□□□□ -1.75
TRM12	YML005W	YPL071C	Q02864	156 aa		4.12	□□□□□ -1.75
TRM12	YML005W	MUB1	Q03162	620 aa		4.12	□□□□□ -1.75
TRM12	YML005W	SPC19	Q03954	165 aa		4.12	□□□□□ -1.75
TRM12	YML005W	YML053C	Q04978	212 aa		4.12	□□□□□ -1.75
TRM12	YML005W	YLR287C	Q05881	355 aa		4.12	□□□□□ -1.75
TRM12	YML005W	PCL8	Q08966	492 aa		4.12	□□□□□ -1.75
TRM12	YML005W	ERG27	Q12452	347 aa	Known RBP	4.12	□□□□□ -1.75
TRM12	YML005W	AI5_ALPHA	Q9ZZX1	630 aa		4.12	□□□□□ -1.75
TRM12	YML005W	AAC1	P04710	309 aa		4.11	□□□□□ -1.75
TRM12	YML005W	MET17	P06106	444 aa		4.11	□□□□□ -1.75
TRM12	YML005W	SEC53	P07283	254 aa	Known RBP	4.11	□□□□□ -1.75
TRM12	YML005W	YHL017W	P38745	532 aa		4.11	□□□□□ -1.75
TRM12	YML005W	SEC24	P40482	926 aa	Known RBP	4.11	□□□□□ -1.75
TRM12	YML005W	LYS4	P49367	693 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM12	YML005W	CTR1	P49573	406 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms