RNA–Protein interactions for RNA: YLR079W

SIC1, Transcript of Cyclin-dependent kinase inhibitor (CKI), yeast

Gene SIC1, Length 855 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIC1	YLR079W	SMK1	P41808	388 aa		4.69	□□□□□ -1.66
SIC1	YLR079W	SAE2	P46946	345 aa		4.69	□□□□□ -1.66
SIC1	YLR079W	BPL1	P48445	690 aa	Predicted RBP	4.69	□□□□□ -1.66
SIC1	YLR079W	YRB30	P53107	440 aa	Predicted RBP	4.69	□□□□□ -1.66
SIC1	YLR079W	THI7	Q05998	598 aa		4.69	□□□□□ -1.66
SIC1	YLR079W	BAG7	Q12128	409 aa		4.69	□□□□□ -1.66
SIC1	YLR079W	SUL2	Q12325	893 aa		4.69	□□□□□ -1.66
SIC1	YLR079W	SSM4	P40318	1319 aa		4.69	□□□□□ -1.66
SIC1	YLR079W	CET1	O13297	549 aa	Predicted RBP	4.68	□□□□□ -1.66
SIC1	YLR079W	APN1	P22936	367 aa		4.68	□□□□□ -1.66
SIC1	YLR079W	RRP43	P25359	394 aa	Predicted RBP	4.68	□□□□□ -1.66
SIC1	YLR079W	URK1	P27515	501 aa		4.68	□□□□□ -1.66
SIC1	YLR079W	RAD16	P31244	790 aa		4.68	□□□□□ -1.66
SIC1	YLR079W	SAP1	P39955	897 aa	Known RBP	4.68	□□□□□ -1.66
SIC1	YLR079W	YIL161W	P40449	235 aa	Known RBP	4.68	□□□□□ -1.66
SIC1	YLR079W	SNO3	P43544	222 aa		4.68	□□□□□ -1.66
SIC1	YLR079W	ZAP1	P47043	880 aa		4.68	□□□□□ -1.66
SIC1	YLR079W	YML053C	Q04978	212 aa		4.68	□□□□□ -1.66
SIC1	YLR079W	PNO1	Q99216	274 aa	Known RBP	4.68	□□□□□ -1.66
SIC1	YLR079W	SES1	P07284	462 aa	Known RBP	4.67	□□□□□ -1.66
SIC1	YLR079W	ILV2	P07342	687 aa	Known RBP	4.67	□□□□□ -1.66
SIC1	YLR079W	UBC1	P21734	215 aa	Known RBP	4.67	□□□□□ -1.66
SIC1	YLR079W	LRE1	P25579	583 aa	Known RBP	4.67	□□□□□ -1.66
SIC1	YLR079W	LAC1	P28496	418 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	HES1	P35843	434 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	YBR138C	P38277	524 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	ERC1	P38767	581 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	UME6	P39001	836 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	NMD5	P46970	1048 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	YPL071C	Q02864	156 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	RIM13	Q03792	727 aa		4.67	□□□□□ -1.66
SIC1	YLR079W	ILS1	P09436	1072 aa	Known RBP	4.66	□□□□□ -1.66
SIC1	YLR079W	APA1	P16550	321 aa	Known RBP	4.66	□□□□□ -1.66
SIC1	YLR079W	NCP1	P16603	691 aa	Known RBP	4.66	□□□□□ -1.66
SIC1	YLR079W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
SIC1	YLR079W	NUP1	P20676	1076 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	MBR1	P23493	339 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	BEM3	P32873	1128 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	FTH1	P38310	465 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	PHM8	P40025	321 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	YML122C	Q03207	126 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	CIA1	Q05583	330 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	TPO3	Q06451	622 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	CSR1	Q06705	408 aa	Known RBP	4.66	□□□□□ -1.66
SIC1	YLR079W	VAM6	Q07468	1049 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	YOR389W	Q08912	624 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	SWT1	Q12104	458 aa		4.66	□□□□□ -1.66
SIC1	YLR079W	MON2	P48563	1636 aa	Predicted RBP	4.65	□□□□□ -1.66
SIC1	YLR079W	URE2	P23202	354 aa	Known RBP	4.65	□□□□□ -1.67
SIC1	YLR079W	PTC6	P25646	442 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	RPT3	P33298	428 aa	Known RBP	4.65	□□□□□ -1.67
SIC1	YLR079W	PSY4	P38193	441 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	BUD16	P39988	312 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	IML2	P47031	731 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	NPA3	P47122	385 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	ASE1	P50275	885 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	YGR079W	P53249	370 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	DCP2	P53550	970 aa	Known RBP	4.65	□□□□□ -1.67
SIC1	YLR079W	ARC35	P53731	342 aa	Known RBP	4.65	□□□□□ -1.67
SIC1	YLR079W	ERG13	P54839	491 aa	Known RBP	4.65	□□□□□ -1.67
SIC1	YLR079W	LYS21	Q12122	440 aa	Known RBP	4.65	□□□□□ -1.67
SIC1	YLR079W	Q0010	Q9ZZX9	128 aa		4.65	□□□□□ -1.67
SIC1	YLR079W	TPK1	P06244	397 aa		4.64	□□□□□ -1.67
SIC1	YLR079W	FUI1	P38196	639 aa		4.64	□□□□□ -1.67
SIC1	YLR079W	KAP123	P40069	1113 aa	Known RBP	4.64	□□□□□ -1.67
SIC1	YLR079W	ULP2	P40537	1034 aa	Predicted RBP	4.64	□□□□□ -1.67
SIC1	YLR079W	IST3	P40565	148 aa	Predicted RBP	4.64	□□□□□ -1.67
SIC1	YLR079W	IRC7	P43623	340 aa		4.64	□□□□□ -1.67
SIC1	YLR079W	CSL4	P53859	292 aa	Predicted RBP	4.64	□□□□□ -1.67
SIC1	YLR079W	IDP3	P53982	420 aa	Known RBP	4.64	□□□□□ -1.67
SIC1	YLR079W	YDR109C	Q04585	715 aa		4.64	□□□□□ -1.67
SIC1	YLR079W	LEA1	Q08963	238 aa	Predicted RBP	4.64	□□□□□ -1.67
SIC1	YLR079W	COX1	P00401	534 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	ATP2	P00830	511 aa	Known RBP	4.63	□□□□□ -1.67
SIC1	YLR079W	MAK32	P23060	363 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	PTP1	P25044	335 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	TEF4	P36008	412 aa	Known RBP	4.63	□□□□□ -1.67
SIC1	YLR079W	ASG1	P40467	964 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	ERR3	P42222	437 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	BNA3	P47039	444 aa	Known RBP	4.63	□□□□□ -1.67
SIC1	YLR079W	CTF18	P49956	741 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	TAM41	P53230	385 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	ECM16	Q04217	1267 aa	Known RBP	4.63	□□□□□ -1.67
SIC1	YLR079W	RAD34	Q06665	692 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	ERG27	Q12452	347 aa	Known RBP	4.63	□□□□□ -1.67
SIC1	YLR079W	YLR111W	Q12528	110 aa		4.63	□□□□□ -1.67
SIC1	YLR079W	MSS51	P32335	436 aa		4.62	□□□□□ -1.67
SIC1	YLR079W	PSA1	P41940	361 aa	Known RBP	4.62	□□□□□ -1.67
SIC1	YLR079W	MSY1	P48527	492 aa		4.62	□□□□□ -1.67
SIC1	YLR079W	THI3	Q07471	609 aa		4.62	□□□□□ -1.67
SIC1	YLR079W	PRS5	Q12265	496 aa	Known RBP	4.62	□□□□□ -1.67
SIC1	YLR079W	COX17	Q12287	69 aa		4.62	□□□□□ -1.67
SIC1	YLR079W	RTC1	Q08281	1341 aa		4.62	□□□□□ -1.67
SIC1	YLR079W	CDC15	P27636	974 aa		4.61	□□□□□ -1.67
SIC1	YLR079W	TFC3	P34111	1160 aa		4.61	□□□□□ -1.67
SIC1	YLR079W	XBP1	P40489	647 aa		4.61	□□□□□ -1.67
SIC1	YLR079W	ORC5	P50874	479 aa		4.61	□□□□□ -1.67
SIC1	YLR079W	SNU56	Q03782	492 aa	Known RBP	4.61	□□□□□ -1.67
SIC1	YLR079W	YML003W	P0CF16	290 aa		4.6	□□□□□ -1.67
SIC1	YLR079W	TRX2	P22803	104 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms