RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C RPL34AP87262 121 aaPredicted RBP10.59□□□□□ -0.71
SHM2YLR058C CDC14Q00684 551 aa10.59□□□□□ -0.71
SHM2YLR058C REG1Q00816 1014 aa10.59□□□□□ -0.71
SHM2YLR058C YHM2Q04013 314 aa10.59□□□□□ -0.71
SHM2YLR058C OMS1Q06668 471 aa10.59□□□□□ -0.71
SHM2YLR058C LDB18Q07887 179 aa10.59□□□□□ -0.71
SHM2YLR058C CMS1Q07897 291 aaKnown RBP10.59□□□□□ -0.71
SHM2YLR058C YLR046CQ12253 270 aa10.59□□□□□ -0.71
SHM2YLR058C PEX11Q12462 236 aa10.59□□□□□ -0.71
SHM2YLR058C GGA2P38817 585 aaKnown RBP10.58□□□□□ -0.72
SHM2YLR058C SPC97P38863 823 aa10.58□□□□□ -0.72
SHM2YLR058C DUN1P39009 513 aa10.58□□□□□ -0.72
SHM2YLR058C CIN4P39110 191 aa10.58□□□□□ -0.72
SHM2YLR058C DOT6P40059 670 aaKnown RBP10.58□□□□□ -0.72
SHM2YLR058C CHS6P40955 746 aa10.58□□□□□ -0.72
SHM2YLR058C SLT2Q00772 484 aa10.58□□□□□ -0.72
SHM2YLR058C YSH1Q06224 779 aaPredicted RBP10.58□□□□□ -0.72
SHM2YLR058C GPA2P10823 449 aa10.58□□□□□ -0.72
SHM2YLR058C SST2P11972 698 aaKnown RBP10.58□□□□□ -0.72
SHM2YLR058C HSP60P19882 572 aaKnown RBP10.58□□□□□ -0.72
SHM2YLR058C DAL81P21657 970 aa10.58□□□□□ -0.72
SHM2YLR058C SGF29P25554 259 aa10.58□□□□□ -0.72
SHM2YLR058C GEX1P25596 615 aa10.58□□□□□ -0.72
SHM2YLR058C GEX2P36173 615 aa10.58□□□□□ -0.72
SHM2YLR058C ETR1P38071 380 aa10.58□□□□□ -0.72
SHM2YLR058C VEL1P53058 206 aa10.58□□□□□ -0.72
SHM2YLR058C SFB2P53953 876 aa10.58□□□□□ -0.72
SHM2YLR058C PIR1Q03178 341 aa10.58□□□□□ -0.72
SHM2YLR058C YET3Q07451 203 aa10.58□□□□□ -0.72
SHM2YLR058C BUD20Q08004 166 aaPredicted RBP10.58□□□□□ -0.72
SHM2YLR058C YEL077CQ3E7X8 1277 aa10.58□□□□□ -0.72
SHM2YLR058C INO1P11986 533 aa10.57□□□□□ -0.72
SHM2YLR058C CLN1P20437 546 aa10.57□□□□□ -0.72
SHM2YLR058C AMS1P22855 1083 aa10.57□□□□□ -0.72
SHM2YLR058C PXA1P41909 870 aa10.57□□□□□ -0.72
SHM2YLR058C BUD13P46947 266 aaPredicted RBP10.57□□□□□ -0.72
SHM2YLR058C YTP1P53584 459 aa10.57□□□□□ -0.72
SHM2YLR058C RSC4Q02206 625 aa10.57□□□□□ -0.72
SHM2YLR058C BUD22Q04347 519 aaKnown RBP10.57□□□□□ -0.72
SHM2YLR058C RAD59Q12223 238 aa10.57□□□□□ -0.72
SHM2YLR058C YMR084WA2P2R3 262 aa10.56□□□□□ -0.72
SHM2YLR058C GDA1P32621 518 aa10.56□□□□□ -0.72
SHM2YLR058C GYP8P43570 497 aa10.56□□□□□ -0.72
SHM2YLR058C AIM23P47015 356 aa10.56□□□□□ -0.72
SHM2YLR058C AIM14P53109 570 aa10.56□□□□□ -0.72
SHM2YLR058C NUP100Q02629 959 aa10.56□□□□□ -0.72
SHM2YLR058C TRS31Q03337 283 aa10.56□□□□□ -0.72
SHM2YLR058C NHX1Q04121 633 aa10.56□□□□□ -0.72
SHM2YLR058C FLC1Q08967 793 aa10.56□□□□□ -0.72
SHM2YLR058C RPS14AP06367 137 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C ERG20P08524 352 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C SSC1P0CS90 654 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C SCH9P11792 824 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C RBK1P25332 333 aa10.55□□□□□ -0.72
SHM2YLR058C PUP3P25451 205 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C YCR051WP25631 222 aa10.55□□□□□ -0.72
SHM2YLR058C STE5P32917 917 aa10.55□□□□□ -0.72
SHM2YLR058C ALY1P36117 915 aa10.55□□□□□ -0.72
SHM2YLR058C SET3P36124 751 aa10.55□□□□□ -0.72
SHM2YLR058C NEM1P38757 446 aa10.55□□□□□ -0.72
SHM2YLR058C RPS14BP39516 138 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C SLX8P40072 274 aa10.55□□□□□ -0.72
SHM2YLR058C RMD8P43620 662 aa10.55□□□□□ -0.72
SHM2YLR058C CCT8P47079 568 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C HST2P53686 357 aa10.55□□□□□ -0.72
SHM2YLR058C YNR065CP53751 1116 aa10.55□□□□□ -0.72
SHM2YLR058C IPI3P53877 555 aa10.55□□□□□ -0.72
SHM2YLR058C UTP13Q05946 817 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C TDA5Q06417 326 aaKnown RBP10.55□□□□□ -0.72
SHM2YLR058C TRE2Q08693 809 aa10.55□□□□□ -0.72
SHM2YLR058C HIS5P07172 385 aa10.54□□□□□ -0.72
SHM2YLR058C HSP26P15992 214 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
SHM2YLR058C SRV2P17555 526 aaKnown RBP10.54□□□□□ -0.72
SHM2YLR058C TYE7P33122 291 aaPredicted RBP10.54□□□□□ -0.72
SHM2YLR058C TFA2P36145 328 aa10.54□□□□□ -0.72
SHM2YLR058C CRP1P38845 465 aaKnown RBP10.54□□□□□ -0.72
SHM2YLR058C REV7P38927 245 aa10.54□□□□□ -0.72
SHM2YLR058C SEO1P39709 593 aa10.54□□□□□ -0.72
SHM2YLR058C PAN6P40459 309 aa10.54□□□□□ -0.72
SHM2YLR058C TFG1P41895 735 aaPredicted RBP10.54□□□□□ -0.72
SHM2YLR058C PYK2P52489 506 aaKnown RBP10.54□□□□□ -0.72
SHM2YLR058C SAP4P53036 818 aa10.54□□□□□ -0.72
SHM2YLR058C LSC1P53598 329 aaKnown RBP10.54□□□□□ -0.72
SHM2YLR058C NOP15P53927 220 aaPredicted RBP10.54□□□□□ -0.72
SHM2YLR058C IMP4P53941 290 aaKnown RBP10.54□□□□□ -0.72
SHM2YLR058C FAR8Q05040 523 aa10.54□□□□□ -0.72
SHM2YLR058C CDC123Q05791 360 aa10.54□□□□□ -0.72
SHM2YLR058C PER33Q12144 273 aa10.54□□□□□ -0.72
SHM2YLR058C NCA2Q12374 616 aa10.54□□□□□ -0.72
SHM2YLR058C YSP3P25036 478 aa10.53□□□□□ -0.72
SHM2YLR058C DCC1P25559 380 aa10.53□□□□□ -0.72
SHM2YLR058C MSH1P25846 959 aa10.53□□□□□ -0.72
SHM2YLR058C AEP1P32493 518 aa10.53□□□□□ -0.72
SHM2YLR058C MRP21P38175 177 aa10.53□□□□□ -0.72
SHM2YLR058C YHI9P38765 294 aa10.53□□□□□ -0.72
SHM2YLR058C MEF2P39677 819 aa10.53□□□□□ -0.72
SHM2YLR058C RAD26P40352 1085 aa10.53□□□□□ -0.72
SHM2YLR058C BIO4P53630 237 aa10.53□□□□□ -0.72
SHM2YLR058C ORC3P54790 616 aa10.53□□□□□ -0.72
SHM2YLR058C RSB1Q08417 382 aa10.53□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms