RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W ZAP1P47043 880 aa1.19□□□□□ -2.22
PRP16YKR086W NOP15P53927 220 aaPredicted RBP1.19□□□□□ -2.22
PRP16YKR086W DAK1P54838 584 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W PRP3Q03338 469 aaPredicted RBP1.19□□□□□ -2.22
PRP16YKR086W YDR179W-AQ03983 463 aa1.19□□□□□ -2.22
PRP16YKR086W AHA1Q12449 350 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W RPN13O13563 156 aa1.19□□□□□ -2.22
PRP16YKR086W HOP1P20050 605 aa1.19□□□□□ -2.22
PRP16YKR086W YJU2P28320 278 aaPredicted RBP1.19□□□□□ -2.22
PRP16YKR086W TMT1P32643 299 aa1.19□□□□□ -2.22
PRP16YKR086W NUP120P35729 1037 aa1.19□□□□□ -2.22
PRP16YKR086W CBP4P37267 147 aa1.19□□□□□ -2.22
PRP16YKR086W UBA4P38820 440 aa1.19□□□□□ -2.22
PRP16YKR086W UBP12P39538 1254 aa1.19□□□□□ -2.22
PRP16YKR086W SCS2P40075 244 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W UFO1Q04511 668 aa1.19□□□□□ -2.22
PRP16YKR086W HFI1Q12060 488 aa1.19□□□□□ -2.22
PRP16YKR086W HUA2Q12134 243 aa1.19□□□□□ -2.22
PRP16YKR086W YLR111WQ12528 110 aa1.19□□□□□ -2.22
PRP16YKR086W YER190C-BP0CX94 160 aa1.18□□□□□ -2.22
PRP16YKR086W YEL077W-AP0CX95 160 aa1.18□□□□□ -2.22
PRP16YKR086W YGR296C-BP0CX96 160 aa1.18□□□□□ -2.22
PRP16YKR086W YPL283W-BP0CX97 160 aa1.18□□□□□ -2.22
PRP16YKR086W YPR204C-AP0CX98 160 aa1.18□□□□□ -2.22
PRP16YKR086W ATP12P22135 325 aa1.18□□□□□ -2.22
PRP16YKR086W URE2P23202 354 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W PHO3P24031 467 aa1.18□□□□□ -2.22
PRP16YKR086W SER1P33330 395 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W DHR2P36009 735 aaPredicted RBP1.18□□□□□ -2.22
PRP16YKR086W OAF3P36023 863 aa1.18□□□□□ -2.22
PRP16YKR086W YJL193WP39542 402 aa1.18□□□□□ -2.22
PRP16YKR086W YEL057CP39983 233 aa1.18□□□□□ -2.22
PRP16YKR086W YEL025CP39991 1188 aa1.18□□□□□ -2.22
PRP16YKR086W TDA10P42938 290 aa1.18□□□□□ -2.22
PRP16YKR086W ATG21Q02887 496 aa1.18□□□□□ -2.22
PRP16YKR086W RIM13Q03792 727 aa1.18□□□□□ -2.22
PRP16YKR086W ARA2Q04212 335 aa1.18□□□□□ -2.22
PRP16YKR086W PGK1P00560 416 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W ACO1P19414 778 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
PRP16YKR086W CBP3P21560 335 aa1.18□□□□□ -2.22
PRP16YKR086W SAT4P25333 603 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W DBF4P32325 704 aa1.18□□□□□ -2.22
PRP16YKR086W MSS51P32335 436 aa1.18□□□□□ -2.22
PRP16YKR086W EUG1P32474 517 aa1.18□□□□□ -2.22
PRP16YKR086W UGP1P32861 499 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W EXO1P39875 702 aa1.18□□□□□ -2.22
PRP16YKR086W YIP4P53093 235 aa1.18□□□□□ -2.22
PRP16YKR086W OGG1P53397 376 aaPredicted RBP1.18□□□□□ -2.22
PRP16YKR086W EFR3Q03653 782 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W YDL073WQ07454 984 aa1.18□□□□□ -2.22
PRP16YKR086W YRM1Q12340 786 aa1.18□□□□□ -2.22
PRP16YKR086W SEC18P18759 758 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W MAK32P23060 363 aa1.17□□□□□ -2.22
PRP16YKR086W DSS4P32601 143 aa1.17□□□□□ -2.22
PRP16YKR086W SLC1P33333 303 aa1.17□□□□□ -2.22
PRP16YKR086W EHT1P38295 451 aa1.17□□□□□ -2.22
PRP16YKR086W EAF5P39995 279 aa1.17□□□□□ -2.22
PRP16YKR086W VFA1P40080 203 aa1.17□□□□□ -2.22
PRP16YKR086W GPP1P41277 250 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W TAX4P47030 604 aa1.17□□□□□ -2.22
PRP16YKR086W YJL055WP47044 245 aa1.17□□□□□ -2.22
PRP16YKR086W ASK10P48361 1146 aa1.17□□□□□ -2.22
PRP16YKR086W SAP4P53036 818 aa1.17□□□□□ -2.22
PRP16YKR086W YPL108WQ02872 168 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W FDC1Q03034 503 aa1.17□□□□□ -2.22
PRP16YKR086W SEG1Q04279 960 aa1.17□□□□□ -2.22
PRP16YKR086W TDA9Q04545 1251 aa1.17□□□□□ -2.22
PRP16YKR086W TSR2Q06672 205 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W PCL8Q08966 492 aa1.17□□□□□ -2.22
PRP16YKR086W HMG2P12684 1045 aa1.17□□□□□ -2.22
PRP16YKR086W APN1P22936 367 aa1.17□□□□□ -2.22
PRP16YKR086W AAD3P25612 363 aa1.17□□□□□ -2.22
PRP16YKR086W GSY2P27472 705 aa1.17□□□□□ -2.22
PRP16YKR086W PRP45P28004 379 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W NIC96P34077 839 aa1.17□□□□□ -2.22
PRP16YKR086W HOT13P36078 116 aa1.17□□□□□ -2.22
PRP16YKR086W STV1P37296 890 aa1.17□□□□□ -2.22
PRP16YKR086W APE3P37302 537 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W ENP1P38333 483 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W VPS8P39702 1274 aa1.17□□□□□ -2.22
PRP16YKR086W ERP2P39704 215 aa1.17□□□□□ -2.22
PRP16YKR086W LRO1P40345 661 aa1.17□□□□□ -2.22
PRP16YKR086W PRM2P40534 656 aa1.17□□□□□ -2.22
PRP16YKR086W YFL040WP43562 540 aa1.17□□□□□ -2.22
PRP16YKR086W BPL1P48445 690 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W YGR054WP53235 642 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W NNF2P53253 936 aa1.17□□□□□ -2.22
PRP16YKR086W RBG2P53295 368 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W ATP23P53722 227 aa1.17□□□□□ -2.22
PRP16YKR086W HLR1Q04429 423 aa1.17□□□□□ -2.22
PRP16YKR086W DIS3Q08162 1001 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W ULA1Q12059 462 aa1.17□□□□□ -2.22
PRP16YKR086W APC2Q12440 853 aa1.17□□□□□ -2.22
PRP16YKR086W SEC3P33332 1336 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W NUC1P08466 329 aa1.17□□□□□ -2.22
PRP16YKR086W YUR1P26725 428 aa1.17□□□□□ -2.22
PRP16YKR086W CNE1P27825 502 aa1.17□□□□□ -2.22
PRP16YKR086W PSF2P40359 213 aa1.17□□□□□ -2.22
PRP16YKR086W CAB2P40506 365 aa1.17□□□□□ -2.22
PRP16YKR086W YIR016WP40572 265 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms