RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W ZAP1P47043 880 aa1.19□□□□□ -2.22
PRP16YKR086W NOP15P53927 220 aaPredicted RBP1.19□□□□□ -2.22
PRP16YKR086W DAK1P54838 584 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W PRP3Q03338 469 aaPredicted RBP1.19□□□□□ -2.22
PRP16YKR086W YDR179W-AQ03983 463 aa1.19□□□□□ -2.22
PRP16YKR086W AHA1Q12449 350 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W RPN13O13563 156 aa1.19□□□□□ -2.22
PRP16YKR086W HOP1P20050 605 aa1.19□□□□□ -2.22
PRP16YKR086W YJU2P28320 278 aaPredicted RBP1.19□□□□□ -2.22
PRP16YKR086W TMT1P32643 299 aa1.19□□□□□ -2.22
PRP16YKR086W NUP120P35729 1037 aa1.19□□□□□ -2.22
PRP16YKR086W CBP4P37267 147 aa1.19□□□□□ -2.22
PRP16YKR086W UBA4P38820 440 aa1.19□□□□□ -2.22
PRP16YKR086W UBP12P39538 1254 aa1.19□□□□□ -2.22
PRP16YKR086W SCS2P40075 244 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W UFO1Q04511 668 aa1.19□□□□□ -2.22
PRP16YKR086W HFI1Q12060 488 aa1.19□□□□□ -2.22
PRP16YKR086W HUA2Q12134 243 aa1.19□□□□□ -2.22
PRP16YKR086W YLR111WQ12528 110 aa1.19□□□□□ -2.22
PRP16YKR086W YER190C-BP0CX94 160 aa1.18□□□□□ -2.22
PRP16YKR086W YEL077W-AP0CX95 160 aa1.18□□□□□ -2.22
PRP16YKR086W YGR296C-BP0CX96 160 aa1.18□□□□□ -2.22
PRP16YKR086W YPL283W-BP0CX97 160 aa1.18□□□□□ -2.22
PRP16YKR086W YPR204C-AP0CX98 160 aa1.18□□□□□ -2.22
PRP16YKR086W ATP12P22135 325 aa1.18□□□□□ -2.22
PRP16YKR086W URE2P23202 354 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W PHO3P24031 467 aa1.18□□□□□ -2.22
PRP16YKR086W SER1P33330 395 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W DHR2P36009 735 aaPredicted RBP1.18□□□□□ -2.22
PRP16YKR086W OAF3P36023 863 aa1.18□□□□□ -2.22
PRP16YKR086W YJL193WP39542 402 aa1.18□□□□□ -2.22
PRP16YKR086W YEL057CP39983 233 aa1.18□□□□□ -2.22
PRP16YKR086W YEL025CP39991 1188 aa1.18□□□□□ -2.22
PRP16YKR086W TDA10P42938 290 aa1.18□□□□□ -2.22
PRP16YKR086W ATG21Q02887 496 aa1.18□□□□□ -2.22
PRP16YKR086W RIM13Q03792 727 aa1.18□□□□□ -2.22
PRP16YKR086W ARA2Q04212 335 aa1.18□□□□□ -2.22
PRP16YKR086W PGK1P00560 416 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W ACO1P19414 778 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
PRP16YKR086W CBP3P21560 335 aa1.18□□□□□ -2.22
PRP16YKR086W SAT4P25333 603 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W DBF4P32325 704 aa1.18□□□□□ -2.22
PRP16YKR086W MSS51P32335 436 aa1.18□□□□□ -2.22
PRP16YKR086W EUG1P32474 517 aa1.18□□□□□ -2.22
PRP16YKR086W UGP1P32861 499 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W EXO1P39875 702 aa1.18□□□□□ -2.22
PRP16YKR086W YIP4P53093 235 aa1.18□□□□□ -2.22
PRP16YKR086W OGG1P53397 376 aaPredicted RBP1.18□□□□□ -2.22
PRP16YKR086W EFR3Q03653 782 aaKnown RBP1.18□□□□□ -2.22
PRP16YKR086W YDL073WQ07454 984 aa1.18□□□□□ -2.22
PRP16YKR086W YRM1Q12340 786 aa1.18□□□□□ -2.22
PRP16YKR086W SEC18P18759 758 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W MAK32P23060 363 aa1.17□□□□□ -2.22
PRP16YKR086W DSS4P32601 143 aa1.17□□□□□ -2.22
PRP16YKR086W SLC1P33333 303 aa1.17□□□□□ -2.22
PRP16YKR086W EHT1P38295 451 aa1.17□□□□□ -2.22
PRP16YKR086W EAF5P39995 279 aa1.17□□□□□ -2.22
PRP16YKR086W VFA1P40080 203 aa1.17□□□□□ -2.22
PRP16YKR086W GPP1P41277 250 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W TAX4P47030 604 aa1.17□□□□□ -2.22
PRP16YKR086W YJL055WP47044 245 aa1.17□□□□□ -2.22
PRP16YKR086W ASK10P48361 1146 aa1.17□□□□□ -2.22
PRP16YKR086W SAP4P53036 818 aa1.17□□□□□ -2.22
PRP16YKR086W YPL108WQ02872 168 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W FDC1Q03034 503 aa1.17□□□□□ -2.22
PRP16YKR086W SEG1Q04279 960 aa1.17□□□□□ -2.22
PRP16YKR086W TDA9Q04545 1251 aa1.17□□□□□ -2.22
PRP16YKR086W TSR2Q06672 205 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W PCL8Q08966 492 aa1.17□□□□□ -2.22
PRP16YKR086W HMG2P12684 1045 aa1.17□□□□□ -2.22
PRP16YKR086W APN1P22936 367 aa1.17□□□□□ -2.22
PRP16YKR086W AAD3P25612 363 aa1.17□□□□□ -2.22
PRP16YKR086W GSY2P27472 705 aa1.17□□□□□ -2.22
PRP16YKR086W PRP45P28004 379 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W NIC96P34077 839 aa1.17□□□□□ -2.22
PRP16YKR086W HOT13P36078 116 aa1.17□□□□□ -2.22
PRP16YKR086W STV1P37296 890 aa1.17□□□□□ -2.22
PRP16YKR086W APE3P37302 537 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W ENP1P38333 483 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W VPS8P39702 1274 aa1.17□□□□□ -2.22
PRP16YKR086W ERP2P39704 215 aa1.17□□□□□ -2.22
PRP16YKR086W LRO1P40345 661 aa1.17□□□□□ -2.22
PRP16YKR086W PRM2P40534 656 aa1.17□□□□□ -2.22
PRP16YKR086W YFL040WP43562 540 aa1.17□□□□□ -2.22
PRP16YKR086W BPL1P48445 690 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W YGR054WP53235 642 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W NNF2P53253 936 aa1.17□□□□□ -2.22
PRP16YKR086W RBG2P53295 368 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W ATP23P53722 227 aa1.17□□□□□ -2.22
PRP16YKR086W HLR1Q04429 423 aa1.17□□□□□ -2.22
PRP16YKR086W DIS3Q08162 1001 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W ULA1Q12059 462 aa1.17□□□□□ -2.22
PRP16YKR086W APC2Q12440 853 aa1.17□□□□□ -2.22
PRP16YKR086W SEC3P33332 1336 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W NUC1P08466 329 aa1.17□□□□□ -2.22
PRP16YKR086W YUR1P26725 428 aa1.17□□□□□ -2.22
PRP16YKR086W CNE1P27825 502 aa1.17□□□□□ -2.22
PRP16YKR086W PSF2P40359 213 aa1.17□□□□□ -2.22
PRP16YKR086W CAB2P40506 365 aa1.17□□□□□ -2.22
PRP16YKR086W YIR016WP40572 265 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 104.6 ms