RNA–Protein interactions for RNA: YKL071W

YKL071W, Transcript of Putative protein of unknown function, yeast

Gene YKL071W, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL071W	YKL071W	RFA2	P26754	273 aa	Known RBP	4.92	□□□□□ -1.62
YKL071W	YKL071W	NFU1	P32860	256 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	ALY1	P36117	915 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	YBR225W	P38321	900 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	GIP4	P39732	760 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	NPR2	P39923	615 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	THI6	P41835	540 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	INN1	P53901	409 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	UBP16	Q02863	499 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	TDA9	Q04545	1251 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	GSF2	Q04697	403 aa	Known RBP	4.92	□□□□□ -1.62
YKL071W	YKL071W	YDL242W	Q07746	117 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	CIR2	Q08822	631 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	SKM1	Q12469	655 aa		4.92	□□□□□ -1.62
YKL071W	YKL071W	CET1	O13297	549 aa	Predicted RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	FOB1	O13329	566 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	AAC1	P04710	309 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	OLE1	P21147	510 aa	Known RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	YSP3	P25036	478 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	CMK1	P27466	446 aa	Known RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	GDA1	P32621	518 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	NUP120	P35729	1037 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	SKP2	P42843	763 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	NPA3	P47122	385 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	PIL1	P53252	339 aa	Known RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	RBG2	P53295	368 aa	Known RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	SLI1	P53304	468 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	NGL2	Q03264	515 aa	Known RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	RAD30	Q04049	632 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	GTB1	Q04924	702 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	YML053C	Q04978	212 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	MRI1	Q06489	411 aa	Known RBP	4.91	□□□□□ -1.62
YKL071W	YKL071W	YOR019W	Q99248	730 aa		4.91	□□□□□ -1.62
YKL071W	YKL071W	COX1	P00401	534 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	RNR3	P21672	869 aa	Known RBP	4.9	□□□□□ -1.63
YKL071W	YKL071W	SGF29	P25554	259 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	JNM1	P36224	373 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	TDP1	P38319	544 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	ERC1	P38767	581 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	YJL206C	P39529	758 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	ASE1	P50275	885 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
YKL071W	YKL071W	NGL3	Q03210	505 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	MFB1	Q04922	465 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	SWT1	Q12104	458 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	LCB4	Q12246	624 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	TAF3	Q12297	353 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	AI5_ALPHA	Q9ZZX1	630 aa		4.9	□□□□□ -1.63
YKL071W	YKL071W	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	PDE1	P22434	369 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	YCK1	P23291	538 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	RRP43	P25359	394 aa	Predicted RBP	4.89	□□□□□ -1.63
YKL071W	YKL071W	LRE1	P25579	583 aa	Known RBP	4.89	□□□□□ -1.63
YKL071W	YKL071W	SWC3	P31376	625 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	LNP1	P38878	278 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	BDH2	P39713	417 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	PFK26	P40433	827 aa	Known RBP	4.89	□□□□□ -1.63
YKL071W	YKL071W	ARC1	P46672	376 aa	Known RBP	4.89	□□□□□ -1.63
YKL071W	YKL071W	SRB7	P47822	140 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	YGL117W	P53133	265 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	COQ6	P53318	479 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	TGS1	Q12052	315 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	PUS9	Q12069	462 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	ZPS1	Q12512	249 aa		4.89	□□□□□ -1.63
YKL071W	YKL071W	CPA2	P03965	1118 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	CHO2	P05374	869 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	CDC24	P11433	854 aa	Predicted RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	MRP7	P12687	371 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	MFT1	P33441	392 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	LOT5	P34234	306 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	MTG2	P38860	518 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	SAP1	P39955	897 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	TPA1	P40032	644 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	JHD1	P40034	492 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	YIL161W	P40449	235 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	RMD8	P43620	662 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	MSE1	P48525	536 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	ASN1	P49089	572 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	LYS4	P49367	693 aa	Predicted RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	DSD1	P53095	428 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	YGL036W	P53185	909 aa	Predicted RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	MUB1	Q03162	620 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	RAD33	Q04231	177 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	YDL073W	Q07454	984 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	RIX7	Q07844	837 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	ACF2	Q12168	779 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	MDM20	Q12387	796 aa	Known RBP	4.88	□□□□□ -1.63
YKL071W	YKL071W	YBR126W-A	Q8TGU7	68 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	YOR111W	Q99210	232 aa		4.88	□□□□□ -1.63
YKL071W	YKL071W	SPO16	P17122	198 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	KGD2	P19262	463 aa	Predicted RBP	4.87	□□□□□ -1.63
YKL071W	YKL071W	SRB5	P32585	307 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	EMP70	P32802	667 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	PIH1	P38768	344 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	SLZ1	P40167	298 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	SDS3	P40505	327 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	IME4	P41833	600 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	SWP82	P43554	623 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	YFL015C	P43578	164 aa		4.87	□□□□□ -1.63
YKL071W	YKL071W	IRC6	P43615	237 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 521 ms