RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C NUP133P36161 1157 aa2.59□□□□□ -1.99
PRE4YFR050C HMT1P38074 348 aa2.59□□□□□ -1.99
PRE4YFR050C TIF5P38431 405 aaKnown RBP2.59□□□□□ -1.99
PRE4YFR050C YHL017WP38745 532 aa2.59□□□□□ -1.99
PRE4YFR050C NDT80P38830 627 aa2.59□□□□□ -1.99
PRE4YFR050C YJL163CP46996 555 aa2.59□□□□□ -1.99
PRE4YFR050C BNA2P47125 453 aa2.59□□□□□ -1.99
PRE4YFR050C BNA5Q05979 453 aa2.59□□□□□ -1.99
PRE4YFR050C TGL5Q12043 749 aa2.59□□□□□ -1.99
PRE4YFR050C YLR149CQ99296 730 aa2.59□□□□□ -1.99
PRE4YFR050C Q0142Q9ZZW4 58 aa2.59□□□□□ -1.99
PRE4YFR050C ADE3P07245 946 aaKnown RBP2.58□□□□□ -2
PRE4YFR050C ADE2P21264 571 aaKnown RBP2.58□□□□□ -2
PRE4YFR050C LDB16P25587 256 aa2.58□□□□□ -2
PRE4YFR050C GRX7P38068 203 aa2.58□□□□□ -2
PRE4YFR050C YBR053CP38235 358 aa2.58□□□□□ -2
PRE4YFR050C PCL5P38794 229 aa2.58□□□□□ -2
PRE4YFR050C ECM1P39715 212 aa2.58□□□□□ -2
PRE4YFR050C STU2P46675 888 aa2.58□□□□□ -2
PRE4YFR050C RNH70P53331 553 aa2.58□□□□□ -2
PRE4YFR050C ALG12P53730 551 aa2.58□□□□□ -2
PRE4YFR050C CTK1Q03957 528 aaKnown RBP2.58□□□□□ -2
PRE4YFR050C NTG2Q08214 380 aa2.58□□□□□ -2
PRE4YFR050C YOL057WQ08225 711 aa2.58□□□□□ -2
PRE4YFR050C IRC13Q08630 104 aa2.58□□□□□ -2
PRE4YFR050C SPE3Q12074 293 aaKnown RBP2.58□□□□□ -2
PRE4YFR050C GLE1Q12315 538 aa2.58□□□□□ -2
PRE4YFR050C TY1B-AO13527 1196 aaKnown RBP2.57□□□□□ -2
PRE4YFR050C RRP14P36080 434 aaKnown RBP2.57□□□□□ -2
PRE4YFR050C CBR1P38626 284 aaKnown RBP2.57□□□□□ -2
PRE4YFR050C MIP6P38760 659 aaKnown RBP2.57□□□□□ -2
PRE4YFR050C BCD1P38772 366 aa2.57□□□□□ -2
PRE4YFR050C REV7P38927 245 aa2.57□□□□□ -2
PRE4YFR050C FMP52P40008 231 aa2.57□□□□□ -2
PRE4YFR050C YJR061WP40355 935 aa2.57□□□□□ -2
PRE4YFR050C VID28P40547 921 aa2.57□□□□□ -2
PRE4YFR050C FET5P43561 622 aa2.57□□□□□ -2
PRE4YFR050C IKS1P47042 667 aa2.57□□□□□ -2
PRE4YFR050C UBC9P50623 157 aaPredicted RBP2.57□□□□□ -2
PRE4YFR050C PSP1P50896 841 aaKnown RBP2.57□□□□□ -2
PRE4YFR050C PCL10P53124 433 aa2.57□□□□□ -2
PRE4YFR050C TFB2Q02939 513 aa2.57□□□□□ -2
PRE4YFR050C COG8Q04632 607 aa2.57□□□□□ -2
PRE4YFR050C SUE1Q06524 206 aa2.57□□□□□ -2
PRE4YFR050C YFT2Q06676 274 aa2.57□□□□□ -2
PRE4YFR050C YPQ1Q12010 308 aa2.57□□□□□ -2
PRE4YFR050C ADE4P04046 510 aaKnown RBP2.56□□□□□ -2
PRE4YFR050C MSF1P08425 469 aa2.56□□□□□ -2
PRE4YFR050C CDC24P11433 854 aaPredicted RBP2.56□□□□□ -2
PRE4YFR050C CDC43P18898 376 aa2.56□□□□□ -2
PRE4YFR050C SFL1P20134 766 aa2.56□□□□□ -2
PRE4YFR050C KIN3P22209 435 aa2.56□□□□□ -2
PRE4YFR050C RSA4P25382 515 aaKnown RBP2.56□□□□□ -2
PRE4YFR050C PSO2P30620 661 aa2.56□□□□□ -2
PRE4YFR050C MVD1P32377 396 aaKnown RBP2.56□□□□□ -2
PRE4YFR050C YEL1P34225 687 aa2.56□□□□□ -2
PRE4YFR050C TRZ1P36159 838 aaPredicted RBP2.56□□□□□ -2
PRE4YFR050C YHR112CP38716 378 aa2.56□□□□□ -2
PRE4YFR050C CCT3P39077 534 aaKnown RBP2.56□□□□□ -2
PRE4YFR050C VID27P40157 782 aa2.56□□□□□ -2
PRE4YFR050C OSW5P40219 148 aa2.56□□□□□ -2
PRE4YFR050C UBP7P40453 1071 aa2.56□□□□□ -2
PRE4YFR050C TEL2P53038 688 aa2.56□□□□□ -2
PRE4YFR050C AIM14P53109 570 aa2.56□□□□□ -2
PRE4YFR050C COX18P53239 316 aa2.56□□□□□ -2
PRE4YFR050C TEX1P53851 422 aaKnown RBP2.56□□□□□ -2
PRE4YFR050C YNL050CP53952 270 aa2.56□□□□□ -2
PRE4YFR050C SSL2Q00578 843 aa2.56□□□□□ -2
PRE4YFR050C ARG5,6Q01217 863 aa2.56□□□□□ -2
PRE4YFR050C MCM21Q06675 368 aa2.56□□□□□ -2
PRE4YFR050C DNL4Q08387 944 aaPredicted RBP2.56□□□□□ -2
PRE4YFR050C HER1Q12276 1246 aa2.56□□□□□ -2
PRE4YFR050C COX3P00420 269 aa2.55□□□□□ -2
PRE4YFR050C HMG1P12683 1054 aa2.55□□□□□ -2
PRE4YFR050C ADH7P25377 361 aa2.55□□□□□ -2
PRE4YFR050C PCL2P25693 308 aa2.55□□□□□ -2
PRE4YFR050C CIN8P27895 1000 aa2.55□□□□□ -2
PRE4YFR050C VPH1P32563 840 aaKnown RBP2.55□□□□□ -2
PRE4YFR050C SPC42P36094 363 aa2.55□□□□□ -2
PRE4YFR050C MNN1P39106 762 aa2.55□□□□□ -2
PRE4YFR050C HOS4P40480 1083 aa2.55□□□□□ -2
PRE4YFR050C ERG10P41338 398 aaKnown RBP2.55□□□□□ -2
PRE4YFR050C BFA1P47113 574 aa2.55□□□□□ -2
PRE4YFR050C UBC11P52492 156 aa2.55□□□□□ -2
PRE4YFR050C YGL081WP53156 320 aa2.55□□□□□ -2
PRE4YFR050C SDA1P53313 767 aaKnown RBP2.55□□□□□ -2
PRE4YFR050C GND2P53319 492 aa2.55□□□□□ -2
PRE4YFR050C SWS2P53937 143 aa2.55□□□□□ -2
PRE4YFR050C GPD1Q00055 391 aaKnown RBP2.55□□□□□ -2
PRE4YFR050C REC102Q02721 264 aa2.55□□□□□ -2
PRE4YFR050C YML096WQ04489 525 aa2.55□□□□□ -2
PRE4YFR050C ATG33Q06485 197 aa2.55□□□□□ -2
PRE4YFR050C CTF3Q12748 733 aa2.55□□□□□ -2
PRE4YFR050C NOP14Q99207 810 aaKnown RBP2.55□□□□□ -2
PRE4YFR050C HAP2P06774 265 aa2.54□□□□□ -2
PRE4YFR050C RNR1P21524 888 aaKnown RBP2.54□□□□□ -2
PRE4YFR050C MIH1P23748 554 aa2.54□□□□□ -2
PRE4YFR050C MKK1P32490 508 aa2.54□□□□□ -2
PRE4YFR050C MTH1P35198 433 aa2.54□□□□□ -2
PRE4YFR050C TVP38P36164 337 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms