RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YHM2Q04013 314 aa1.44□□□□□ -2.18
SMC1YFL008W TRI1Q05024 226 aa1.44□□□□□ -2.18
SMC1YFL008W YOL057WQ08225 711 aa1.44□□□□□ -2.18
SMC1YFL008W YGR161W-CQ3E744 92 aa1.44□□□□□ -2.18
SMC1YFL008W RAV1P47104 1357 aa1.44□□□□□ -2.18
SMC1YFL008W EFM2P38347 419 aa1.44□□□□□ -2.18
SMC1YFL008W PIG2P40187 538 aa1.44□□□□□ -2.18
SMC1YFL008W MAD3P47074 515 aa1.44□□□□□ -2.18
SMC1YFL008W YPR003CP53394 754 aa1.44□□□□□ -2.18
SMC1YFL008W YNL144CP53907 740 aa1.44□□□□□ -2.18
SMC1YFL008W THI7Q05998 598 aa1.44□□□□□ -2.18
SMC1YFL008W CYK3Q07533 885 aa1.44□□□□□ -2.18
SMC1YFL008W RDL1Q12305 139 aaKnown RBP1.44□□□□□ -2.18
SMC1YFL008W ADE6P38972 1358 aaKnown RBP1.44□□□□□ -2.18
SMC1YFL008W CHO1P08456 276 aa1.44□□□□□ -2.18
SMC1YFL008W YMR085WP0CF18 432 aa1.44□□□□□ -2.18
SMC1YFL008W VPS34P22543 875 aa1.44□□□□□ -2.18
SMC1YFL008W APL3P38065 1025 aa1.44□□□□□ -2.18
SMC1YFL008W YLF2P38746 405 aa1.44□□□□□ -2.18
SMC1YFL008W ERC1P38767 581 aa1.44□□□□□ -2.18
SMC1YFL008W NPA3P47122 385 aa1.44□□□□□ -2.18
SMC1YFL008W YBP2P53169 641 aa1.44□□□□□ -2.18
SMC1YFL008W GPD1Q00055 391 aaKnown RBP1.44□□□□□ -2.18
SMC1YFL008W AAD4Q07747 329 aa1.44□□□□□ -2.18
SMC1YFL008W FAP7Q12055 197 aaPredicted RBP1.44□□□□□ -2.18
SMC1YFL008W CET1O13297 549 aaPredicted RBP1.43□□□□□ -2.18
SMC1YFL008W PGK1P00560 416 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W TPK2P06245 380 aa1.43□□□□□ -2.18
SMC1YFL008W KIN3P22209 435 aa1.43□□□□□ -2.18
SMC1YFL008W APN1P22936 367 aa1.43□□□□□ -2.18
SMC1YFL008W CCL1P37366 393 aa1.43□□□□□ -2.18
SMC1YFL008W SCS2P40075 244 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W YIL092WP40497 633 aa1.43□□□□□ -2.18
SMC1YFL008W PEX14P53112 341 aa1.43□□□□□ -2.18
SMC1YFL008W CPR6P53691 371 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W YPR027CQ12079 277 aa1.43□□□□□ -2.18
SMC1YFL008W LYS21Q12122 440 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W GET3Q12154 354 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W YOL114CQ12322 202 aa1.43□□□□□ -2.18
SMC1YFL008W MPD2Q99316 277 aa1.43□□□□□ -2.18
SMC1YFL008W MOT1P32333 1867 aa1.43□□□□□ -2.18
SMC1YFL008W RIF1P29539 1916 aa1.43□□□□□ -2.18
SMC1YFL008W SIR1P21691 654 aa1.43□□□□□ -2.18
SMC1YFL008W TSR4P25040 408 aa1.43□□□□□ -2.18
SMC1YFL008W SAT4P25333 603 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W YJL193WP39542 402 aa1.43□□□□□ -2.18
SMC1YFL008W YIL152WP40455 235 aa1.43□□□□□ -2.18
SMC1YFL008W MSY1P48527 492 aa1.43□□□□□ -2.18
SMC1YFL008W DRN1P53255 507 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W ZPS1Q12512 249 aa1.43□□□□□ -2.18
SMC1YFL008W YML133CQ03099 1374 aa1.43□□□□□ -2.18
SMC1YFL008W YLL067CQ07888 1374 aa1.43□□□□□ -2.18
SMC1YFL008W FKS1P38631 1876 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W PMS1P14242 873 aa1.43□□□□□ -2.18
SMC1YFL008W ORC2P32833 620 aa1.43□□□□□ -2.18
SMC1YFL008W PUG1P40100 303 aa1.43□□□□□ -2.18
SMC1YFL008W HXT9P40885 567 aa1.43□□□□□ -2.18
SMC1YFL008W ENP2P48234 707 aaKnown RBP1.43□□□□□ -2.18
SMC1YFL008W COX18P53239 316 aa1.43□□□□□ -2.18
SMC1YFL008W MET14Q02196 202 aa1.43□□□□□ -2.18
SMC1YFL008W VAM6Q07468 1049 aa1.43□□□□□ -2.18
SMC1YFL008W RMP1Q12530 201 aa1.43□□□□□ -2.18
SMC1YFL008W GFA1P14742 717 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W SWI4P25302 1093 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W CBF2P32504 956 aa1.42□□□□□ -2.18
SMC1YFL008W PEX2P32800 271 aa1.42□□□□□ -2.18
SMC1YFL008W SSP120P39931 234 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W ZDS2P54786 942 aa1.42□□□□□ -2.18
SMC1YFL008W RPC11Q04307 110 aaPredicted RBP1.42□□□□□ -2.18
SMC1YFL008W PHM6Q05637 104 aa1.42□□□□□ -2.18
SMC1YFL008W PCD1Q12524 340 aa1.42□□□□□ -2.18
SMC1YFL008W AIM44Q99299 758 aa1.42□□□□□ -2.18
SMC1YFL008W RPN13O13563 156 aa1.42□□□□□ -2.18
SMC1YFL008W WHI2P12611 486 aa1.42□□□□□ -2.18
SMC1YFL008W STE12P13574 688 aa1.42□□□□□ -2.18
SMC1YFL008W AIM17P23180 465 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W PRP22P24384 1145 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W SEC1P30619 724 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W DSS4P32601 143 aa1.42□□□□□ -2.18
SMC1YFL008W TGL1P34163 548 aa1.42□□□□□ -2.18
SMC1YFL008W PSD1P39006 500 aa1.42□□□□□ -2.18
SMC1YFL008W YEL025CP39991 1188 aa1.42□□□□□ -2.18
SMC1YFL008W PHM8P40025 321 aa1.42□□□□□ -2.18
SMC1YFL008W PEA2P40091 420 aa1.42□□□□□ -2.18
SMC1YFL008W PTA1Q01329 785 aaPredicted RBP1.42□□□□□ -2.18
SMC1YFL008W TRS23Q03784 219 aa1.42□□□□□ -2.18
SMC1YFL008W CAC2Q04199 468 aa1.42□□□□□ -2.18
SMC1YFL008W PIG1Q06216 648 aa1.42□□□□□ -2.18
SMC1YFL008W CLF1Q12309 687 aaPredicted RBP1.42□□□□□ -2.18
SMC1YFL008W ARP7Q12406 477 aa1.42□□□□□ -2.18
SMC1YFL008W PNO1Q99216 274 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W VAS1P07806 1104 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W SST2P11972 698 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W URK1P27515 501 aa1.42□□□□□ -2.18
SMC1YFL008W SWP82P43554 623 aa1.42□□□□□ -2.18
SMC1YFL008W YLR419WQ06698 1435 aaKnown RBP1.42□□□□□ -2.18
SMC1YFL008W HES1P35843 434 aa1.41□□□□□ -2.18
SMC1YFL008W CBR1P38626 284 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W YHR033WP38690 423 aa1.41□□□□□ -2.18
SMC1YFL008W TPA1P40032 644 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms