RNA–Protein interactions for RNA: YDR056C

YDR056C, Transcript of Putative protein of unknown function, yeast

Gene YDR056C, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR056C	YDR056C	CTK3	P46963	296 aa	Predicted RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	MAL13	P53338	473 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	ATG4	P53867	494 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	MRS2	Q01926	470 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	IRC4	Q03036	179 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	SKY1	Q03656	742 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	MYO5	Q04439	1219 aa	Known RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	YDR341C	Q05506	607 aa	Known RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	VAC14	Q06708	880 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	YOL075C	Q08234	1294 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	MLH3	Q12083	715 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	CHS5	Q12114	671 aa	Known RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	RRP6	Q12149	733 aa	Known RBP	4.78	□□□□□ -1.64
YDR056C	YDR056C	CEX1	Q12453	761 aa		4.78	□□□□□ -1.64
YDR056C	YDR056C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
YDR056C	YDR056C	HIS4	P00815	799 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	MTF2	P10849	440 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	GLN4	P13188	809 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	CDC26	P14724	124 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	ALG1	P16661	449 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	THR1	P17423	357 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	RNR3	P21672	869 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	PRO3	P32263	286 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	FRD1	P32614	470 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	SMF1	P38925	575 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	SAP1	P39955	897 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	ARG2	P40360	574 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	EFM4	P40516	257 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	YFH7	P43591	353 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	AIP1	P46680	615 aa	Known RBP	4.77	□□□□□ -1.65
YDR056C	YDR056C	UBA2	P52488	636 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	YGL138C	P53122	345 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	RTC4	P53850	401 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	COG6	P53959	839 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	YMR102C	Q03177	834 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	YLR287C	Q05881	355 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	YFT2	Q06676	274 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	TIP41	Q12199	356 aa		4.77	□□□□□ -1.65
YDR056C	YDR056C	TUF1	P02992	437 aa	Known RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	SEC15	P22224	910 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	RAD57	P25301	460 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	KRE2	P27809	442 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	DAL3	P32459	195 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	YEL043W	P32618	956 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	MTH1	P35198	433 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	RPC25	P35718	212 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	MUD2	P36084	527 aa	Known RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	UBS1	P38290	277 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	COS111	P38308	924 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	ERG7	P38604	731 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	STT3	P39007	718 aa	Known RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	DUN1	P39009	513 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	BUD16	P39988	312 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	VID27	P40157	782 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	SHQ1	P40486	507 aa	Predicted RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	RNR4	P49723	345 aa	Known RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	TAF4	P50105	388 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	RPT6	Q01939	405 aa	Known RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	SFH1	Q06168	426 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	ATG23	Q06671	453 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	DIB1	Q06819	143 aa	Predicted RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	CWC2	Q12046	339 aa	Predicted RBP	4.76	□□□□□ -1.65
YDR056C	YDR056C	RAD61	Q99359	647 aa		4.76	□□□□□ -1.65
YDR056C	YDR056C	PAP1	P29468	568 aa	Known RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	PRE4	P30657	266 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	MSS1	P32559	526 aa	Predicted RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	CBR1	P38626	284 aa	Known RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	VFA1	P40080	203 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	YIL077C	P40508	320 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	YJR120W	P47157	116 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	PIP2	P52960	996 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	GND2	P53319	492 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	PRP42	Q03776	544 aa	Known RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	SMD2	Q06217	110 aa	Known RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	RIX7	Q07844	837 aa	Known RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	IRC10	Q08118	586 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	NEW1	Q08972	1196 aa	Known RBP	4.75	□□□□□ -1.65
YDR056C	YDR056C	YPR027C	Q12079	277 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	BUG1	Q12191	341 aa		4.75	□□□□□ -1.65
YDR056C	YDR056C	RPS9B	P05755	195 aa	Known RBP	4.74	□□□□□ -1.65
YDR056C	YDR056C	SNF3	P10870	884 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	ABF1	P14164	731 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	THR4	P16120	514 aa	Known RBP	4.74	□□□□□ -1.65
YDR056C	YDR056C	NTH1	P32356	751 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	SRB4	P32569	687 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	ECM32	P32644	1121 aa	Known RBP	4.74	□□□□□ -1.65
YDR056C	YDR056C	BYE1	P36106	594 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	CTP1	P38152	299 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	MED8	P38304	223 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	EMP65	P40085	556 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	THI6	P41835	540 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	QRI1	P43123	477 aa	Known RBP	4.74	□□□□□ -1.65
YDR056C	YDR056C	VTC2	P43585	828 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	MIC19	P43594	170 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	MPS3	P47069	682 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	RFX1	P48743	811 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	LYS4	P49367	693 aa	Predicted RBP	4.74	□□□□□ -1.65
YDR056C	YDR056C	CTR1	P49573	406 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	NGL3	Q03210	505 aa		4.74	□□□□□ -1.65
YDR056C	YDR056C	HLR1	Q04429	423 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms