RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	VPS3	P23643	1011 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	RRT12	P25381	491 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	PRR1	P28708	518 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	PAH1	P32567	862 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	SRP101	P32916	621 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	KDX1	P36005	433 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	SHE3	P38272	425 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	TIF5	P38431	405 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	YHR054C	P38780	354 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	PMC1	P38929	1173 aa	Predicted RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	LCP5	P40079	357 aa	Predicted RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	TIM54	P47045	478 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	YJR054W	P47114	497 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	MCM6	P53091	1017 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	BRE5	P53741	515 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	DUS1	P53759	423 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	YNL247W	P53852	767 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	GPD1	Q00055	391 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	VPS72	Q03388	795 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	SXM1	Q04175	944 aa	Known RBP	5.29	□□□□□ -1.56
IWR1	YDL115C	URH1	Q04179	340 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	SIL1	Q08199	421 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	SUT2	Q12286	268 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	PCD1	Q12524	340 aa		5.29	□□□□□ -1.56
IWR1	YDL115C	ECM29	P38737	1868 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	HEM1	P09950	548 aa	Predicted RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	SPO16	P17122	198 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	GLN3	P18494	730 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	CDC42	P19073	191 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	ADE2	P21264	571 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	FUB1	P25659	250 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	PAP1	P29468	568 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	GYP6	P32806	458 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	YBL055C	P34220	418 aa	Predicted RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	DRE2	P36152	348 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	YKR078W	P36158	585 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	YMC2	P38087	329 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	PCM1	P38628	557 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	AIM21	P40563	679 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	PHO86	P46956	311 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	AZR1	P50080	613 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	SCS3	P53012	380 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	MND1	P53102	219 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	RPL22B	P56628	122 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	UTP6	Q02354	440 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	RPN4	Q03465	531 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	PPM1	Q04081	328 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	GSF2	Q04697	403 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	IVY1	Q04934	453 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	OMS1	Q06668	471 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	DNL4	Q08387	944 aa	Predicted RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	MDM20	Q12387	796 aa	Known RBP	5.28	□□□□□ -1.56
IWR1	YDL115C	ZPS1	Q12512	249 aa		5.28	□□□□□ -1.56
IWR1	YDL115C	SPE1	P08432	466 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	RPL4A	P10664	362 aa	Known RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	RNR1	P21524	888 aa	Known RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	AAR2	P32357	355 aa	Predicted RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	GCG1	P32656	232 aa	Known RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	CCL1	P37366	393 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	CBR1	P38626	284 aa	Known RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	YER158C	P40095	573 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	RAD26	P40352	1085 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	INA22	P40576	216 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	CHA4	P43634	648 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	BRO1	P48582	844 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	RPL4B	P49626	362 aa	Known RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	YML6	P51998	286 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	YGL036W	P53185	909 aa	Predicted RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	SFB2	P53953	876 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	MTG1	Q03151	367 aa	Predicted RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	MZM1	Q03429	123 aa	Predicted RBP	5.27	□□□□□ -1.57
IWR1	YDL115C	YDR222W	Q04925	415 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	APC5	Q08683	685 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	TAF10	Q12030	206 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	SEY1	Q99287	776 aa		5.27	□□□□□ -1.57
IWR1	YDL115C	QCR6	P00127	147 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	ADE8	P04161	214 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	RAD1	P06777	1100 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	ADE3	P07245	946 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	TUB3	P09734	445 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	KGD2	P19262	463 aa	Predicted RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	PRP9	P19736	530 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	HCM1	P25364	564 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	CDC11	P32458	415 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	PPG1	P32838	368 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	BCS1	P32839	456 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	STE5	P32917	917 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	MUD2	P36084	527 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	LAS1	P36146	502 aa	Predicted RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	YBR184W	P38299	523 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	TSL1	P38427	1098 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	PLB1	P39105	664 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	CIN4	P39110	191 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	ESL1	P40456	1118 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	SAP185	P40856	1058 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	MIC19	P43594	170 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	NOG2	P53742	486 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	MUK1	Q02866	612 aa		5.26	□□□□□ -1.57
IWR1	YDL115C	DIG1	Q03063	452 aa	Known RBP	5.26	□□□□□ -1.57
IWR1	YDL115C	STE23	Q06010	1027 aa		5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms