RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W CRT10Q08226 957 aa3.56□□□□□ -1.84
DPB3YBR278W TMA16Q08687 178 aa3.56□□□□□ -1.84
DPB3YBR278W PRS5Q12265 496 aaKnown RBP3.56□□□□□ -1.84
DPB3YBR278W RVB2Q12464 471 aaKnown RBP3.56□□□□□ -1.84
DPB3YBR278W CDC24P11433 854 aaPredicted RBP3.55□□□□□ -1.84
DPB3YBR278W KGD2P19262 463 aaPredicted RBP3.55□□□□□ -1.84
DPB3YBR278W ERG8P24521 451 aa3.55□□□□□ -1.84
DPB3YBR278W SGF29P25554 259 aa3.55□□□□□ -1.84
DPB3YBR278W CCT7P42943 550 aaKnown RBP3.55□□□□□ -1.84
DPB3YBR278W CTR1P49573 406 aa3.55□□□□□ -1.84
DPB3YBR278W YML119WQ03208 357 aa3.55□□□□□ -1.84
DPB3YBR278W NGL2Q03264 515 aaKnown RBP3.55□□□□□ -1.84
DPB3YBR278W YMR206WQ03695 313 aa3.55□□□□□ -1.84
DPB3YBR278W YDL073WQ07454 984 aa3.55□□□□□ -1.84
DPB3YBR278W ENT4Q07872 247 aa3.55□□□□□ -1.84
DPB3YBR278W PSK2Q08217 1101 aa3.55□□□□□ -1.84
DPB3YBR278W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
DPB3YBR278W SWT1Q12104 458 aa3.55□□□□□ -1.84
DPB3YBR278W YOR111WQ99210 232 aa3.55□□□□□ -1.84
DPB3YBR278W AAC1P04710 309 aa3.54□□□□□ -1.84
DPB3YBR278W YML003WP0CF16 290 aa3.54□□□□□ -1.84
DPB3YBR278W YPK1P12688 680 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W OLE1P21147 510 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W AMD2P22580 549 aa3.54□□□□□ -1.84
DPB3YBR278W GLG1P36143 616 aa3.54□□□□□ -1.84
DPB3YBR278W YPT10P38146 199 aa3.54□□□□□ -1.84
DPB3YBR278W TDP1P38319 544 aa3.54□□□□□ -1.84
DPB3YBR278W ERC1P38767 581 aa3.54□□□□□ -1.84
DPB3YBR278W PIH1P38768 344 aa3.54□□□□□ -1.84
DPB3YBR278W MIT1P40002 666 aa3.54□□□□□ -1.84
DPB3YBR278W MAM1P40065 302 aa3.54□□□□□ -1.84
DPB3YBR278W PFK26P40433 827 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W AAD10P47182 288 aa3.54□□□□□ -1.84
DPB3YBR278W DUO1P53168 247 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W IMO32P53219 342 aa3.54□□□□□ -1.84
DPB3YBR278W RBG2P53295 368 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W ATG23Q06671 453 aa3.54□□□□□ -1.84
DPB3YBR278W HBT1Q07653 1046 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W ERG27Q12452 347 aaKnown RBP3.54□□□□□ -1.84
DPB3YBR278W CHO2P05374 869 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W RNR3P21672 869 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W CMK1P27466 446 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W GDA1P32621 518 aa3.53□□□□□ -1.84
DPB3YBR278W ALY1P36117 915 aa3.53□□□□□ -1.84
DPB3YBR278W ESL2P36168 1195 aa3.53□□□□□ -1.84
DPB3YBR278W NOP4P37838 685 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W KTR3P38130 404 aaPredicted RBP3.53□□□□□ -1.84
DPB3YBR278W CHS7P38843 316 aa3.53□□□□□ -1.84
DPB3YBR278W UBP7P40453 1071 aa3.53□□□□□ -1.84
DPB3YBR278W IRC6P43615 237 aa3.53□□□□□ -1.84
DPB3YBR278W MSE1P48525 536 aa3.53□□□□□ -1.84
DPB3YBR278W COQ6P53318 479 aa3.53□□□□□ -1.84
DPB3YBR278W SUN4P53616 420 aa3.53□□□□□ -1.84
DPB3YBR278W YNR061CP53747 219 aa3.53□□□□□ -1.84
DPB3YBR278W RAD30Q04049 632 aa3.53□□□□□ -1.84
DPB3YBR278W TDA9Q04545 1251 aa3.53□□□□□ -1.84
DPB3YBR278W MRI1Q06489 411 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W VIP1Q06685 1146 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W YDL242WQ07746 117 aa3.53□□□□□ -1.84
DPB3YBR278W RIX7Q07844 837 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W CIR2Q08822 631 aa3.53□□□□□ -1.84
DPB3YBR278W PCL8Q08966 492 aa3.53□□□□□ -1.84
DPB3YBR278W NUS1Q12063 375 aa3.53□□□□□ -1.84
DPB3YBR278W ACF2Q12168 779 aa3.53□□□□□ -1.84
DPB3YBR278W LCB4Q12246 624 aa3.53□□□□□ -1.84
DPB3YBR278W TAF3Q12297 353 aa3.53□□□□□ -1.84
DPB3YBR278W MDM20Q12387 796 aaKnown RBP3.53□□□□□ -1.84
DPB3YBR278W FOB1O13329 566 aa3.52□□□□□ -1.85
DPB3YBR278W CPA2P03965 1118 aaKnown RBP3.52□□□□□ -1.85
DPB3YBR278W TPK2P06245 380 aa3.52□□□□□ -1.85
DPB3YBR278W WHI2P12611 486 aa3.52□□□□□ -1.85
DPB3YBR278W PRE8P23639 250 aa3.52□□□□□ -1.85
DPB3YBR278W RFA2P26754 273 aaKnown RBP3.52□□□□□ -1.85
DPB3YBR278W SIP1P32578 815 aa3.52□□□□□ -1.85
DPB3YBR278W NFU1P32860 256 aa3.52□□□□□ -1.85
DPB3YBR278W TFC3P34111 1160 aa3.52□□□□□ -1.85
DPB3YBR278W YBR225WP38321 900 aa3.52□□□□□ -1.85
DPB3YBR278W FUN12P39730 1002 aaKnown RBP3.52□□□□□ -1.85
DPB3YBR278W SLZ1P40167 298 aa3.52□□□□□ -1.85
DPB3YBR278W SDS3P40505 327 aa3.52□□□□□ -1.85
DPB3YBR278W NPA3P47122 385 aa3.52□□□□□ -1.85
DPB3YBR278W ARE2P53629 642 aaKnown RBP3.52□□□□□ -1.85
DPB3YBR278W TIM44Q01852 431 aa3.52□□□□□ -1.85
DPB3YBR278W UBP16Q02863 499 aa3.52□□□□□ -1.85
DPB3YBR278W SPC19Q03954 165 aa3.52□□□□□ -1.85
DPB3YBR278W MFB1Q04922 465 aa3.52□□□□□ -1.85
DPB3YBR278W ZPS1Q12512 249 aa3.52□□□□□ -1.85
DPB3YBR278W YBR126W-AQ8TGU7 68 aa3.52□□□□□ -1.85
DPB3YBR278W Q0010Q9ZZX9 128 aa3.52□□□□□ -1.85
DPB3YBR278W SEC53P07283 254 aaKnown RBP3.51□□□□□ -1.85
DPB3YBR278W SUI3P09064 285 aaKnown RBP3.51□□□□□ -1.85
DPB3YBR278W PGS1P25578 521 aa3.51□□□□□ -1.85
DPB3YBR278W SRB5P32585 307 aa3.51□□□□□ -1.85
DPB3YBR278W RPF2P36160 344 aaKnown RBP3.51□□□□□ -1.85
DPB3YBR278W YMC2P38087 329 aa3.51□□□□□ -1.85
DPB3YBR278W MTG2P38860 518 aa3.51□□□□□ -1.85
DPB3YBR278W LAS21P40367 830 aa3.51□□□□□ -1.85
DPB3YBR278W DJP1P40564 432 aa3.51□□□□□ -1.85
DPB3YBR278W SGM1P47166 707 aa3.51□□□□□ -1.85
DPB3YBR278W PIL1P53252 339 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms