RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 RAI14Q9P0K7 980 aa13.18□□□□□ -0.3
CALCOCO2-228ENST00000576582 SRGAP3O43295 1099 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 BAG3O95817 575 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 GNAI3P08754 354 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 COL6A1P12109 1028 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 PLCG2P16885 1265 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 ZKSCAN1P17029 563 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 RRP1BQ14684 758 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 Q7L0L9 218 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 CCAR1Q8IX12 1150 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 MEIS3Q99687 375 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
CALCOCO2-228ENST00000576582 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 IGSF3O75054 1194 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 RGS2P41220 211 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 HERVK_113P62684 666 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 CACNB2Q08289 660 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 MTMR2Q13614 643 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 LHX8Q68G74 356 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 USP6NLQ92738 828 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
CALCOCO2-228ENST00000576582 PFASO15067 1338 aa13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 PPP4CP60510 307 aa13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 TRIM34Q9BYJ4 488 aa13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
CALCOCO2-228ENST00000576582 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 ERVK-24P63145 666 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 Q3C1V9 767 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 MORN1Q5T089 497 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 GPR142Q7Z601 462 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 PLEKHH3Q7Z736 793 aa13.14□□□□□ -0.31
CALCOCO2-228ENST00000576582 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 CCNA1P78396 465 aa13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 NAA16Q6N069 864 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 PI16Q6UXB8 463 aa13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 CRACR2BQ8N4Y2 399 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 APBA2Q99767 749 aa13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
CALCOCO2-228ENST00000576582 MSCO60682 206 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 CCND3P30281 292 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 MCAMP43121 646 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 JAG1P78504 1218 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 LRRC26Q2I0M4 334 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 LBHD1Q9BQE6 289 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-228ENST00000576582 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 PEX10O60683 326 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 CCL14Q16627 93 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 PORCNQ9H237 461 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 DNAJC18Q9H819 358 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
CALCOCO2-228ENST00000576582 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 GNAI2P04899 355 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 C12orf42Q96LP6 360 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 PAGR1Q9BTK6 254 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
CALCOCO2-228ENST00000576582 FLT1P17948 1338 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms