RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 NEUROD6Q96NK8 337 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 MEIS3Q99687 375 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 DHX36Q9H2U1 1008 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
CALCOCO2-227ENST00000575560 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 ASNSP08243 561 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 MAPK4P31152 587 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 Q3C1V9 767 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 MORN1Q5T089 497 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
CALCOCO2-227ENST00000575560 PRUNE2Q8WUY3 3088 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 PPP4CP60510 307 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 ERVK-24P63145 666 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 LRRC26Q2I0M4 334 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 FOXP4Q8IVH2 680 aaPredicted RBP12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 PORCNQ9H237 461 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 DNAJC18Q9H819 358 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
CALCOCO2-227ENST00000575560 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 MCAMP43121 646 aa12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 CCL14Q16627 93 aa12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 SHROOM1Q2M3G4 852 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 GPR142Q7Z601 462 aa12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 LRP2BPQ9P2M1 347 aa12.29□□□□□ -0.44
CALCOCO2-227ENST00000575560 BAG3O95817 575 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 GNAI3P08754 354 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 RGS2P41220 211 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 PDE3AQ14432 1141 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 TGFBRAP1Q8WUH2 860 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 AATFQ9NY61 560 aaKnown RBP eCLIP12.28□□□□□ -0.44
CALCOCO2-227ENST00000575560 ATAD5Q96QE3 1844 aa12.27□□□□□ -0.44
CALCOCO2-227ENST00000575560 SPTBN5Q9NRC6 3674 aaKnown RBP12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 PLCG2P16885 1265 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 NAA16Q6N069 864 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 ADGRA1Q86SQ6 560 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 MAPKAPK5Q8IW41 473 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 APBA2Q99767 749 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 ZBTB21Q9ULJ3 1066 aa12.27□□□□□ -0.45
CALCOCO2-227ENST00000575560 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 CNMDO75829 334 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 GDF11O95390 407 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 MAP2K5Q13163 448 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 CCAR1Q8IX12 1150 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 EDC3Q96F86 508 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 GUCD1Q96NT3 240 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 PAGR1Q9BTK6 254 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 FLRT1Q9NZU1 646 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 RABGAP1Q9Y3P9 1069 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 FLT1P17948 1338 aa12.26□□□□□ -0.45
CALCOCO2-227ENST00000575560 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 IGHA2P01877 340 aa12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 CYP2E1P05181 493 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 C12orf42Q96LP6 360 aa12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 SENP6Q9GZR1 1112 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-227ENST00000575560 PNMA6EA0A0J9YXQ4 647 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 IGSF3O75054 1194 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 HOXC6P09630 235 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 PTPREP23469 700 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
CALCOCO2-227ENST00000575560 G3BP1Q13283 466 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms