RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 MAP3K10Q02779 954 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 MTFR1Q15390 333 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
C11orf54-209ENST00000530620 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 HMG20BQ9P0W2 317 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 AFG3L2Q9Y4W6 797 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
C11orf54-209ENST00000530620 GPR75-ASB3A0A0A6YYF3 556 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 GRK4P32298 578 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 PRKCZQ05513 592 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
C11orf54-209ENST00000530620 TBC1D9Q6ZT07 1266 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 SPATA5Q8NB90 893 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-209ENST00000530620 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
C11orf54-209ENST00000530620 TRIOBPQ9H2D6 2365 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
C11orf54-209ENST00000530620 BCAR3O75815 825 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 GNAI2P04899 355 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 HOXD10P28358 340 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
C11orf54-209ENST00000530620 MCAMP43121 646 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
C11orf54-209ENST00000530620 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
C11orf54-209ENST00000530620 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
C11orf54-209ENST00000530620 FCGRTP55899 365 aa13.13□□□□□ -0.31
C11orf54-209ENST00000530620 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
C11orf54-209ENST00000530620 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
C11orf54-209ENST00000530620 SLC45A1Q9Y2W3 748 aa13.13□□□□□ -0.31
C11orf54-209ENST00000530620 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
C11orf54-209ENST00000530620 CCL5P13501 91 aa13.12□□□□□ -0.31
C11orf54-209ENST00000530620 GSTO1P78417 241 aa13.12□□□□□ -0.31
C11orf54-209ENST00000530620 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
C11orf54-209ENST00000530620 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.31
C11orf54-209ENST00000530620 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
C11orf54-209ENST00000530620 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-209ENST00000530620 H0YGN5 161 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 LDHCP07864 332 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 G3BP1Q13283 466 aaKnown RBP eCLIP13.11□□□□□ -0.31
C11orf54-209ENST00000530620 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
C11orf54-209ENST00000530620 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 TMEM57Q8N5G2 664 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-209ENST00000530620 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-209ENST00000530620 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
C11orf54-209ENST00000530620 DDX60LQ5H9U9 1706 aaKnown RBP13.1□□□□□ -0.31
C11orf54-209ENST00000530620 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 GJB1P08034 283 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 GJA8P48165 433 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 FLT3LGP49771 235 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
C11orf54-209ENST00000530620 UBXN2AP68543 259 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 TEX11Q8IYF3 940 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 SH3RF3Q8TEJ3 882 aaPredicted RBP13.1□□□□□ -0.31
C11orf54-209ENST00000530620 RNF208Q9H0X6 261 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
C11orf54-209ENST00000530620 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 TNPO2O14787 897 aaKnown RBP13.09□□□□□ -0.31
C11orf54-209ENST00000530620 ADCY3O60266 1144 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-209ENST00000530620 UQCRFS1P1P0C7P4 283 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 ELNP15502 786 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 SPP2Q13103 211 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 U2AF1L4Q8WU68 220 aaKnown RBP13.09□□□□□ -0.31
C11orf54-209ENST00000530620 DBNDD2Q9BQY9 259 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
C11orf54-209ENST00000530620 FPGT-TNNI3KV9GXZ4 949 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 MYH8P13535 1937 aa13.09□□□□□ -0.31
C11orf54-209ENST00000530620 CAP2P40123 477 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 HMGCS2P54868 508 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 FAM110CQ1W6H9 321 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 TTC39AQ5SRH9 613 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 NAA16Q6N069 864 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-209ENST00000530620 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-209ENST00000530620 GPR108Q9NPR9 543 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
C11orf54-209ENST00000530620 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
C11orf54-209ENST00000530620 INHAP05111 366 aa13.07□□□□□ -0.32
C11orf54-209ENST00000530620 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-209ENST00000530620 IRF5Q13568 498 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1021.1 ms