RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
PACS1-203ENST00000524815 ERVK-24P63145 666 aa18.38■□□□□ 0.53
PACS1-203ENST00000524815 PDE3AQ14432 1141 aa18.38■□□□□ 0.53
PACS1-203ENST00000524815 MVPQ14764 893 aaKnown RBP18.38■□□□□ 0.53
PACS1-203ENST00000524815 SHROOM1Q2M3G4 852 aaPredicted RBP18.38■□□□□ 0.53
PACS1-203ENST00000524815 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
PACS1-203ENST00000524815 SH3RF3Q8TEJ3 882 aaPredicted RBP18.38■□□□□ 0.53
PACS1-203ENST00000524815 DNAJC18Q9H819 358 aa18.38■□□□□ 0.53
PACS1-203ENST00000524815 PI4KBQ9UBF8 816 aa18.38■□□□□ 0.53
PACS1-203ENST00000524815 SPTBN5Q9NRC6 3674 aaKnown RBP18.37■□□□□ 0.53
PACS1-203ENST00000524815 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 ASNSP08243 561 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 ALDH1L2Q3SY69 923 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 PLEKHH3Q7Z736 793 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 APBA2Q99767 749 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 AKAP2Q9Y2D5 859 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 SIPA1L1O43166 1804 aa18.37■□□□□ 0.53
PACS1-203ENST00000524815 METTL16Q86W50 562 aaKnown RBP18.36■□□□□ 0.53
PACS1-203ENST00000524815 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
PACS1-203ENST00000524815 RAI14Q9P0K7 980 aa18.36■□□□□ 0.53
PACS1-203ENST00000524815 USP17L10C9JJH3 530 aa18.35■□□□□ 0.53
PACS1-203ENST00000524815 ANP32CO43423 234 aa18.35■□□□□ 0.53
PACS1-203ENST00000524815 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
PACS1-203ENST00000524815 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
PACS1-203ENST00000524815 DHX36Q9H2U1 1008 aaKnown RBP18.35■□□□□ 0.53
PACS1-203ENST00000524815 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
PACS1-203ENST00000524815 FLRT1Q9NZU1 646 aa18.35■□□□□ 0.53
PACS1-203ENST00000524815 E9PSI1 815 aa18.34■□□□□ 0.53
PACS1-203ENST00000524815 MAP2K5Q13163 448 aa18.34■□□□□ 0.53
PACS1-203ENST00000524815 MEIS3Q99687 375 aa18.34■□□□□ 0.53
PACS1-203ENST00000524815 LBHD1Q9BQE6 289 aaPredicted RBP18.34■□□□□ 0.53
PACS1-203ENST00000524815 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
PACS1-203ENST00000524815 CNMDO75829 334 aa18.33■□□□□ 0.52
PACS1-203ENST00000524815 GDF11O95390 407 aa18.33■□□□□ 0.52
PACS1-203ENST00000524815 ARID4AP29374 1257 aaPredicted RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 MCAMP43121 646 aa18.33■□□□□ 0.52
PACS1-203ENST00000524815 ATN1P54259 1190 aaPredicted RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 ZNF697Q5TEC3 545 aa18.33■□□□□ 0.52
PACS1-203ENST00000524815 FOXP4Q8IVH2 680 aaPredicted RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 CCAR1Q8IX12 1150 aaKnown RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 GTF3C2Q8WUA4 911 aaPredicted RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 CDX2Q99626 313 aaPredicted RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 NOB1Q9ULX3 412 aaKnown RBP18.33■□□□□ 0.52
PACS1-203ENST00000524815 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.52
PACS1-203ENST00000524815 MAST2Q6P0Q8 1798 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 MAPKAPK5Q8IW41 473 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 TGFBRAP1Q8WUH2 860 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
PACS1-203ENST00000524815 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
PACS1-203ENST00000524815 ZBTB21Q9ULJ3 1066 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 NDUFB9Q9Y6M9 179 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 FRMPD3Q5JV73 1810 aa18.32■□□□□ 0.52
PACS1-203ENST00000524815 FLT1P17948 1338 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 PRUNE2Q8WUY3 3088 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 SRGAP3O43295 1099 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 SHHQ15465 462 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 LPAR1Q92633 364 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 SEMA6BQ9H3T3 888 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 LRP2BPQ9P2M1 347 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 PALD1Q9ULE6 856 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
PACS1-203ENST00000524815 RTP1P59025 263 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 PPP4CP60510 307 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 ADGRA1Q86SQ6 560 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 TRPV1Q8NER1 839 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 CDH23Q9H251 3354 aa18.3■□□□□ 0.52
PACS1-203ENST00000524815 SLC15A5A6NIM6 579 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 DNM1LO00429 736 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 BAG3O95817 575 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 IGHA2P01877 340 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 HOXC6P09630 235 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 PTPREP23469 700 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 MTX1Q13505 466 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 C9orf50Q5SZB4 431 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
PACS1-203ENST00000524815 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
PACS1-203ENST00000524815 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
PACS1-203ENST00000524815 NOL10Q9BSC4 688 aaKnown RBP18.29■□□□□ 0.52
PACS1-203ENST00000524815 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
PACS1-203ENST00000524815 LTBP2Q14767 1821 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 MSCO60682 206 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
PACS1-203ENST00000524815 CNGA1P29973 690 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 NAA16Q6N069 864 aaPredicted RBP18.28■□□□□ 0.52
PACS1-203ENST00000524815 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 C12orf42Q96LP6 360 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
PACS1-203ENST00000524815 PRDM6Q9NQX0 595 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 PRKAG2Q9UGJ0 569 aa18.28■□□□□ 0.52
PACS1-203ENST00000524815 USP17L15C9J2P7 530 aa18.27■□□□□ 0.52
PACS1-203ENST00000524815 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.52
PACS1-203ENST00000524815 USP17L11C9JVI0 530 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms